Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0222:0424
Extra
PDB:
ATOM 1 O3' U A 221 49.621 106.846 20.704 1.00 43.55 O
ATOM 2 P A A 222 49.379 106.951 19.117 1.00 45.39 P
ATOM 3 OP1 A A 222 48.367 108.023 18.932 1.00 43.24 O
ATOM 4 OP2 A A 222 49.146 105.612 18.528 1.00 45.13 O
ATOM 5 O5' A A 222 50.781 107.457 18.568 1.00 45.18 O
ATOM 6 C5' A A 222 51.379 108.642 19.110 1.00 45.40 C
ATOM 7 C4' A A 222 52.854 108.644 18.850 1.00 45.11 C
ATOM 8 O4' A A 222 53.490 107.578 19.599 1.00 42.80 O
ATOM 9 C3' A A 222 53.256 108.358 17.418 1.00 45.37 C
ATOM 10 O3' A A 222 53.075 109.499 16.593 1.00 49.02 O
ATOM 11 C2' A A 222 54.707 107.918 17.586 1.00 45.17 C
ATOM 12 O2' A A 222 55.621 108.980 17.810 1.00 44.45 O
ATOM 13 C1' A A 222 54.605 107.088 18.866 1.00 43.83 C
ATOM 14 N9 A A 222 54.385 105.676 18.571 1.00 42.04 N
ATOM 15 C8 A A 222 53.193 105.009 18.417 1.00 42.00 C
ATOM 16 N7 A A 222 53.335 103.736 18.146 1.00 41.90 N
ATOM 17 C5 A A 222 54.710 103.551 18.123 1.00 39.42 C
ATOM 18 C6 A A 222 55.500 102.423 17.894 1.00 39.99 C
ATOM 19 N6 A A 222 54.998 101.214 17.646 1.00 43.16 N
ATOM 20 N1 A A 222 56.842 102.573 17.930 1.00 41.43 N
ATOM 21 C2 A A 222 57.341 103.787 18.190 1.00 40.93 C
ATOM 22 N3 A A 222 56.697 104.927 18.429 1.00 40.27 N
ATOM 23 C4 A A 222 55.368 104.737 18.379 1.00 40.66 C
ATOM 24 P C A 223 53.280 109.369 15.004 1.00 50.63 P
ATOM 25 OP1 C A 223 53.236 110.757 14.470 1.00 53.56 O
ATOM 26 OP2 C A 223 52.375 108.331 14.440 1.00 50.52 O
ATOM 27 O5' C A 223 54.776 108.847 14.899 1.00 49.86 O
TER
ATOM 1 O3' A B 423 60.392 116.688 16.490 1.00 47.60 O
ATOM 2 P A B 424 59.628 116.531 17.888 1.00 48.25 P
ATOM 3 OP1 A B 424 58.811 117.752 18.104 1.00 49.75 O
ATOM 4 OP2 A B 424 60.636 116.129 18.897 1.00 48.30 O
ATOM 5 O5' A B 424 58.651 115.297 17.653 1.00 49.66 O
ATOM 6 C5' A B 424 57.445 115.424 16.881 1.00 48.68 C
ATOM 7 C4' A B 424 56.656 114.140 16.967 1.00 47.96 C
ATOM 8 O4' A B 424 57.446 113.070 16.392 1.00 46.35 O
ATOM 9 C3' A B 424 56.367 113.684 18.389 1.00 47.43 C
ATOM 10 O3' A B 424 55.172 114.300 18.859 1.00 50.49 O
ATOM 11 C2' A B 424 56.237 112.172 18.246 1.00 46.49 C
ATOM 12 O2' A B 424 54.957 111.782 17.790 1.00 44.47 O
ATOM 13 C1' A B 424 57.257 111.880 17.140 1.00 45.62 C
ATOM 14 N9 A B 424 58.575 111.383 17.545 1.00 43.33 N
ATOM 15 C8 A B 424 59.684 112.116 17.893 1.00 43.39 C
ATOM 16 N7 A B 424 60.755 111.388 18.103 1.00 42.90 N
ATOM 17 C5 A B 424 60.318 110.086 17.903 1.00 42.71 C
ATOM 18 C6 A B 424 60.981 108.842 17.957 1.00 42.89 C
ATOM 19 N6 A B 424 62.281 108.705 18.219 1.00 43.01 N
ATOM 20 N1 A B 424 60.252 107.731 17.722 1.00 42.60 N
ATOM 21 C2 A B 424 58.949 107.867 17.447 1.00 43.47 C
ATOM 22 N3 A B 424 58.216 108.976 17.355 1.00 44.19 N
ATOM 23 C4 A B 424 58.969 110.066 17.592 1.00 43.67 C
ATOM 24 P A B 425 55.021 114.677 20.414 1.00 54.70 P
ATOM 25 OP1 A B 425 53.820 115.544 20.544 1.00 53.05 O
ATOM 26 OP2 A B 425 56.341 115.152 20.937 1.00 54.26 O
ATOM 27 O5' A B 425 54.687 113.286 21.112 1.00 54.66 O
TER
ATOM 2 P A A 222 49.379 106.951 19.117 1.00 45.39 P
ATOM 3 OP1 A A 222 48.367 108.023 18.932 1.00 43.24 O
ATOM 4 OP2 A A 222 49.146 105.612 18.528 1.00 45.13 O
ATOM 5 O5' A A 222 50.781 107.457 18.568 1.00 45.18 O
ATOM 6 C5' A A 222 51.379 108.642 19.110 1.00 45.40 C
ATOM 7 C4' A A 222 52.854 108.644 18.850 1.00 45.11 C
ATOM 8 O4' A A 222 53.490 107.578 19.599 1.00 42.80 O
ATOM 9 C3' A A 222 53.256 108.358 17.418 1.00 45.37 C
ATOM 10 O3' A A 222 53.075 109.499 16.593 1.00 49.02 O
ATOM 11 C2' A A 222 54.707 107.918 17.586 1.00 45.17 C
ATOM 12 O2' A A 222 55.621 108.980 17.810 1.00 44.45 O
ATOM 13 C1' A A 222 54.605 107.088 18.866 1.00 43.83 C
ATOM 14 N9 A A 222 54.385 105.676 18.571 1.00 42.04 N
ATOM 15 C8 A A 222 53.193 105.009 18.417 1.00 42.00 C
ATOM 16 N7 A A 222 53.335 103.736 18.146 1.00 41.90 N
ATOM 17 C5 A A 222 54.710 103.551 18.123 1.00 39.42 C
ATOM 18 C6 A A 222 55.500 102.423 17.894 1.00 39.99 C
ATOM 19 N6 A A 222 54.998 101.214 17.646 1.00 43.16 N
ATOM 20 N1 A A 222 56.842 102.573 17.930 1.00 41.43 N
ATOM 21 C2 A A 222 57.341 103.787 18.190 1.00 40.93 C
ATOM 22 N3 A A 222 56.697 104.927 18.429 1.00 40.27 N
ATOM 23 C4 A A 222 55.368 104.737 18.379 1.00 40.66 C
ATOM 24 P C A 223 53.280 109.369 15.004 1.00 50.63 P
ATOM 25 OP1 C A 223 53.236 110.757 14.470 1.00 53.56 O
ATOM 26 OP2 C A 223 52.375 108.331 14.440 1.00 50.52 O
ATOM 27 O5' C A 223 54.776 108.847 14.899 1.00 49.86 O
TER
ATOM 1 O3' A B 423 60.392 116.688 16.490 1.00 47.60 O
ATOM 2 P A B 424 59.628 116.531 17.888 1.00 48.25 P
ATOM 3 OP1 A B 424 58.811 117.752 18.104 1.00 49.75 O
ATOM 4 OP2 A B 424 60.636 116.129 18.897 1.00 48.30 O
ATOM 5 O5' A B 424 58.651 115.297 17.653 1.00 49.66 O
ATOM 6 C5' A B 424 57.445 115.424 16.881 1.00 48.68 C
ATOM 7 C4' A B 424 56.656 114.140 16.967 1.00 47.96 C
ATOM 8 O4' A B 424 57.446 113.070 16.392 1.00 46.35 O
ATOM 9 C3' A B 424 56.367 113.684 18.389 1.00 47.43 C
ATOM 10 O3' A B 424 55.172 114.300 18.859 1.00 50.49 O
ATOM 11 C2' A B 424 56.237 112.172 18.246 1.00 46.49 C
ATOM 12 O2' A B 424 54.957 111.782 17.790 1.00 44.47 O
ATOM 13 C1' A B 424 57.257 111.880 17.140 1.00 45.62 C
ATOM 14 N9 A B 424 58.575 111.383 17.545 1.00 43.33 N
ATOM 15 C8 A B 424 59.684 112.116 17.893 1.00 43.39 C
ATOM 16 N7 A B 424 60.755 111.388 18.103 1.00 42.90 N
ATOM 17 C5 A B 424 60.318 110.086 17.903 1.00 42.71 C
ATOM 18 C6 A B 424 60.981 108.842 17.957 1.00 42.89 C
ATOM 19 N6 A B 424 62.281 108.705 18.219 1.00 43.01 N
ATOM 20 N1 A B 424 60.252 107.731 17.722 1.00 42.60 N
ATOM 21 C2 A B 424 58.949 107.867 17.447 1.00 43.47 C
ATOM 22 N3 A B 424 58.216 108.976 17.355 1.00 44.19 N
ATOM 23 C4 A B 424 58.969 110.066 17.592 1.00 43.67 C
ATOM 24 P A B 425 55.021 114.677 20.414 1.00 54.70 P
ATOM 25 OP1 A B 425 53.820 115.544 20.544 1.00 53.05 O
ATOM 26 OP2 A B 425 56.341 115.152 20.937 1.00 54.26 O
ATOM 27 O5' A B 425 54.687 113.286 21.112 1.00 54.66 O
TER
Atoms:
OP1: (48.367,108.023,18.932)
OP2: (49.146,105.612,18.528)
C3': (53.256,108.358,17.418)
C1': (54.605,107.088,18.866)
C5': (51.379,108.642,19.110)
O4': (53.490,107.578,19.599)
C8: (53.193,105.009,18.417)
O2': (55.621,108.980,17.810)
C6: (55.500,102.423,17.894)
C5: (54.710,103.551,18.123)
C4: (55.368,104.737,18.379)
P: (49.379,106.951,19.117)
C4': (52.854,108.644,18.850)
C2': (54.707,107.918,17.586)
C2: (57.341,103.787,18.190)
N1: (56.842,102.573,17.930)
N3: (56.697,104.927,18.429)
N6: (54.998,101.214,17.646)
N7: (53.335,103.736,18.146)
N9: (54.385,105.676,18.571)
O5': (50.781,107.457,18.568)
O3': (53.075,109.499,16.593)
OP2: (49.146,105.612,18.528)
C3': (53.256,108.358,17.418)
C1': (54.605,107.088,18.866)
C5': (51.379,108.642,19.110)
O4': (53.490,107.578,19.599)
C8: (53.193,105.009,18.417)
O2': (55.621,108.980,17.810)
C6: (55.500,102.423,17.894)
C5: (54.710,103.551,18.123)
C4: (55.368,104.737,18.379)
P: (49.379,106.951,19.117)
C4': (52.854,108.644,18.850)
C2': (54.707,107.918,17.586)
C2: (57.341,103.787,18.190)
N1: (56.842,102.573,17.930)
N3: (56.697,104.927,18.429)
N6: (54.998,101.214,17.646)
N7: (53.335,103.736,18.146)
N9: (54.385,105.676,18.571)
O5': (50.781,107.457,18.568)
O3': (53.075,109.499,16.593)
OP1: (58.811,117.752,18.104)
OP2: (60.636,116.129,18.897)
C3': (56.367,113.684,18.389)
C1': (57.257,111.880,17.140)
C5': (57.445,115.424,16.881)
O4': (57.446,113.070,16.392)
C8: (59.684,112.116,17.893)
O2': (54.957,111.782,17.790)
C6: (60.981,108.842,17.957)
C5: (60.318,110.086,17.903)
C4: (58.969,110.066,17.592)
P: (59.628,116.531,17.888)
C4': (56.656,114.140,16.967)
C2': (56.237,112.172,18.246)
C2: (58.949,107.867,17.447)
N1: (60.252,107.731,17.722)
N3: (58.216,108.976,17.355)
N6: (62.281,108.705,18.219)
N7: (60.755,111.388,18.103)
N9: (58.575,111.383,17.545)
O5': (58.651,115.297,17.653)
O3': (55.172,114.300,18.859)
OP2: (60.636,116.129,18.897)
C3': (56.367,113.684,18.389)
C1': (57.257,111.880,17.140)
C5': (57.445,115.424,16.881)
O4': (57.446,113.070,16.392)
C8: (59.684,112.116,17.893)
O2': (54.957,111.782,17.790)
C6: (60.981,108.842,17.957)
C5: (60.318,110.086,17.903)
C4: (58.969,110.066,17.592)
P: (59.628,116.531,17.888)
C4': (56.656,114.140,16.967)
C2': (56.237,112.172,18.246)
C2: (58.949,107.867,17.447)
N1: (60.252,107.731,17.722)
N3: (58.216,108.976,17.355)
N6: (62.281,108.705,18.219)
N7: (60.755,111.388,18.103)
N9: (58.575,111.383,17.545)
O5': (58.651,115.297,17.653)
O3': (55.172,114.300,18.859)
Image (generated by PyMOL):