Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0222:0424
Extra
PDB:
ATOM 1 O3' U A 221 49.577 106.801 20.693 1.00 49.46 O
ATOM 2 P A A 222 49.352 106.923 19.107 1.00 51.21 P
ATOM 3 OP1 A A 222 48.345 107.999 18.926 1.00 48.42 O
ATOM 4 OP2 A A 222 49.119 105.591 18.499 1.00 50.24 O
ATOM 5 O5' A A 222 50.765 107.419 18.575 1.00 50.46 O
ATOM 6 C5' A A 222 51.382 108.582 19.140 1.00 50.12 C
ATOM 7 C4' A A 222 52.854 108.578 18.850 1.00 50.06 C
ATOM 8 O4' A A 222 53.497 107.503 19.579 1.00 47.77 O
ATOM 9 C3' A A 222 53.237 108.306 17.411 1.00 50.38 C
ATOM 10 O3' A A 222 53.056 109.456 16.593 1.00 53.88 O
ATOM 11 C2' A A 222 54.689 107.857 17.558 1.00 49.51 C
ATOM 12 O2' A A 222 55.600 108.913 17.798 1.00 48.51 O
ATOM 13 C1' A A 222 54.602 107.016 18.832 1.00 48.31 C
ATOM 14 N9 A A 222 54.387 105.599 18.551 1.00 46.71 N
ATOM 15 C8 A A 222 53.194 104.934 18.393 1.00 47.08 C
ATOM 16 N7 A A 222 53.335 103.654 18.145 1.00 45.87 N
ATOM 17 C5 A A 222 54.708 103.464 18.141 1.00 43.62 C
ATOM 18 C6 A A 222 55.496 102.326 17.939 1.00 44.06 C
ATOM 19 N6 A A 222 54.990 101.116 17.704 1.00 45.88 N
ATOM 20 N1 A A 222 56.839 102.470 17.989 1.00 45.45 N
ATOM 21 C2 A A 222 57.340 103.686 18.238 1.00 45.21 C
ATOM 22 N3 A A 222 56.697 104.836 18.452 1.00 45.60 N
ATOM 23 C4 A A 222 55.368 104.652 18.388 1.00 44.59 C
ATOM 24 P C A 223 53.254 109.336 15.001 1.00 56.33 P
ATOM 25 OP1 C A 223 53.221 110.721 14.460 1.00 59.35 O
ATOM 26 OP2 C A 223 52.344 108.303 14.438 1.00 55.92 O
ATOM 27 O5' C A 223 54.748 108.814 14.892 1.00 55.66 O
TER
ATOM 1 O3' A B 423 60.404 116.612 16.534 1.00 52.20 O
ATOM 2 P A B 424 59.651 116.458 17.936 1.00 53.73 P
ATOM 3 OP1 A B 424 58.838 117.678 18.153 1.00 54.03 O
ATOM 4 OP2 A B 424 60.652 116.053 18.948 1.00 53.40 O
ATOM 5 O5' A B 424 58.667 115.227 17.705 1.00 54.32 O
ATOM 6 C5' A B 424 57.461 115.359 16.927 1.00 52.41 C
ATOM 7 C4' A B 424 56.662 114.080 17.010 1.00 52.08 C
ATOM 8 O4' A B 424 57.443 113.003 16.436 1.00 49.07 O
ATOM 9 C3' A B 424 56.364 113.631 18.433 1.00 50.98 C
ATOM 10 O3' A B 424 55.166 114.263 18.878 1.00 52.33 O
ATOM 11 C2' A B 424 56.237 112.117 18.296 1.00 49.40 C
ATOM 12 O2' A B 424 54.964 111.713 17.837 1.00 50.10 O
ATOM 13 C1' A B 424 57.253 111.819 17.189 1.00 47.90 C
ATOM 14 N9 A B 424 58.571 111.322 17.589 1.00 45.89 N
ATOM 15 C8 A B 424 59.678 112.051 17.948 1.00 45.14 C
ATOM 16 N7 A B 424 60.748 111.321 18.157 1.00 44.35 N
ATOM 17 C5 A B 424 60.310 110.021 17.946 1.00 43.82 C
ATOM 18 C6 A B 424 60.969 108.778 18.001 1.00 43.22 C
ATOM 19 N6 A B 424 62.267 108.638 18.272 1.00 41.93 N
ATOM 20 N1 A B 424 60.239 107.669 17.753 1.00 43.60 N
ATOM 21 C2 A B 424 58.940 107.810 17.463 1.00 45.06 C
ATOM 22 N3 A B 424 58.211 108.921 17.368 1.00 45.11 N
ATOM 23 C4 A B 424 58.965 110.005 17.621 1.00 45.20 C
ATOM 24 P A B 425 54.980 114.634 20.432 1.00 57.94 P
ATOM 25 OP1 A B 425 53.745 115.466 20.537 1.00 56.42 O
ATOM 26 OP2 A B 425 56.272 115.149 20.988 1.00 56.70 O
ATOM 27 O5' A B 425 54.660 113.235 21.121 1.00 57.66 O
TER
ATOM 2 P A A 222 49.352 106.923 19.107 1.00 51.21 P
ATOM 3 OP1 A A 222 48.345 107.999 18.926 1.00 48.42 O
ATOM 4 OP2 A A 222 49.119 105.591 18.499 1.00 50.24 O
ATOM 5 O5' A A 222 50.765 107.419 18.575 1.00 50.46 O
ATOM 6 C5' A A 222 51.382 108.582 19.140 1.00 50.12 C
ATOM 7 C4' A A 222 52.854 108.578 18.850 1.00 50.06 C
ATOM 8 O4' A A 222 53.497 107.503 19.579 1.00 47.77 O
ATOM 9 C3' A A 222 53.237 108.306 17.411 1.00 50.38 C
ATOM 10 O3' A A 222 53.056 109.456 16.593 1.00 53.88 O
ATOM 11 C2' A A 222 54.689 107.857 17.558 1.00 49.51 C
ATOM 12 O2' A A 222 55.600 108.913 17.798 1.00 48.51 O
ATOM 13 C1' A A 222 54.602 107.016 18.832 1.00 48.31 C
ATOM 14 N9 A A 222 54.387 105.599 18.551 1.00 46.71 N
ATOM 15 C8 A A 222 53.194 104.934 18.393 1.00 47.08 C
ATOM 16 N7 A A 222 53.335 103.654 18.145 1.00 45.87 N
ATOM 17 C5 A A 222 54.708 103.464 18.141 1.00 43.62 C
ATOM 18 C6 A A 222 55.496 102.326 17.939 1.00 44.06 C
ATOM 19 N6 A A 222 54.990 101.116 17.704 1.00 45.88 N
ATOM 20 N1 A A 222 56.839 102.470 17.989 1.00 45.45 N
ATOM 21 C2 A A 222 57.340 103.686 18.238 1.00 45.21 C
ATOM 22 N3 A A 222 56.697 104.836 18.452 1.00 45.60 N
ATOM 23 C4 A A 222 55.368 104.652 18.388 1.00 44.59 C
ATOM 24 P C A 223 53.254 109.336 15.001 1.00 56.33 P
ATOM 25 OP1 C A 223 53.221 110.721 14.460 1.00 59.35 O
ATOM 26 OP2 C A 223 52.344 108.303 14.438 1.00 55.92 O
ATOM 27 O5' C A 223 54.748 108.814 14.892 1.00 55.66 O
TER
ATOM 1 O3' A B 423 60.404 116.612 16.534 1.00 52.20 O
ATOM 2 P A B 424 59.651 116.458 17.936 1.00 53.73 P
ATOM 3 OP1 A B 424 58.838 117.678 18.153 1.00 54.03 O
ATOM 4 OP2 A B 424 60.652 116.053 18.948 1.00 53.40 O
ATOM 5 O5' A B 424 58.667 115.227 17.705 1.00 54.32 O
ATOM 6 C5' A B 424 57.461 115.359 16.927 1.00 52.41 C
ATOM 7 C4' A B 424 56.662 114.080 17.010 1.00 52.08 C
ATOM 8 O4' A B 424 57.443 113.003 16.436 1.00 49.07 O
ATOM 9 C3' A B 424 56.364 113.631 18.433 1.00 50.98 C
ATOM 10 O3' A B 424 55.166 114.263 18.878 1.00 52.33 O
ATOM 11 C2' A B 424 56.237 112.117 18.296 1.00 49.40 C
ATOM 12 O2' A B 424 54.964 111.713 17.837 1.00 50.10 O
ATOM 13 C1' A B 424 57.253 111.819 17.189 1.00 47.90 C
ATOM 14 N9 A B 424 58.571 111.322 17.589 1.00 45.89 N
ATOM 15 C8 A B 424 59.678 112.051 17.948 1.00 45.14 C
ATOM 16 N7 A B 424 60.748 111.321 18.157 1.00 44.35 N
ATOM 17 C5 A B 424 60.310 110.021 17.946 1.00 43.82 C
ATOM 18 C6 A B 424 60.969 108.778 18.001 1.00 43.22 C
ATOM 19 N6 A B 424 62.267 108.638 18.272 1.00 41.93 N
ATOM 20 N1 A B 424 60.239 107.669 17.753 1.00 43.60 N
ATOM 21 C2 A B 424 58.940 107.810 17.463 1.00 45.06 C
ATOM 22 N3 A B 424 58.211 108.921 17.368 1.00 45.11 N
ATOM 23 C4 A B 424 58.965 110.005 17.621 1.00 45.20 C
ATOM 24 P A B 425 54.980 114.634 20.432 1.00 57.94 P
ATOM 25 OP1 A B 425 53.745 115.466 20.537 1.00 56.42 O
ATOM 26 OP2 A B 425 56.272 115.149 20.988 1.00 56.70 O
ATOM 27 O5' A B 425 54.660 113.235 21.121 1.00 57.66 O
TER
Atoms:
OP1: (48.345,107.999,18.926)
OP2: (49.119,105.591,18.499)
C3': (53.237,108.306,17.411)
C1': (54.602,107.016,18.832)
C5': (51.382,108.582,19.140)
O4': (53.497,107.503,19.579)
C8: (53.194,104.934,18.393)
O2': (55.600,108.913,17.798)
C6: (55.496,102.326,17.939)
C5: (54.708,103.464,18.141)
C4: (55.368,104.652,18.388)
P: (49.352,106.923,19.107)
C4': (52.854,108.578,18.850)
C2': (54.689,107.857,17.558)
C2: (57.340,103.686,18.238)
N1: (56.839,102.470,17.989)
N3: (56.697,104.836,18.452)
N6: (54.990,101.116,17.704)
N7: (53.335,103.654,18.145)
N9: (54.387,105.599,18.551)
O5': (50.765,107.419,18.575)
O3': (53.056,109.456,16.593)
OP2: (49.119,105.591,18.499)
C3': (53.237,108.306,17.411)
C1': (54.602,107.016,18.832)
C5': (51.382,108.582,19.140)
O4': (53.497,107.503,19.579)
C8: (53.194,104.934,18.393)
O2': (55.600,108.913,17.798)
C6: (55.496,102.326,17.939)
C5: (54.708,103.464,18.141)
C4: (55.368,104.652,18.388)
P: (49.352,106.923,19.107)
C4': (52.854,108.578,18.850)
C2': (54.689,107.857,17.558)
C2: (57.340,103.686,18.238)
N1: (56.839,102.470,17.989)
N3: (56.697,104.836,18.452)
N6: (54.990,101.116,17.704)
N7: (53.335,103.654,18.145)
N9: (54.387,105.599,18.551)
O5': (50.765,107.419,18.575)
O3': (53.056,109.456,16.593)
OP1: (58.838,117.678,18.153)
OP2: (60.652,116.053,18.948)
C3': (56.364,113.631,18.433)
C1': (57.253,111.819,17.189)
C5': (57.461,115.359,16.927)
O4': (57.443,113.003,16.436)
C8: (59.678,112.051,17.948)
O2': (54.964,111.713,17.837)
C6: (60.969,108.778,18.001)
C5: (60.310,110.021,17.946)
C4: (58.965,110.005,17.621)
P: (59.651,116.458,17.936)
C4': (56.662,114.080,17.010)
C2': (56.237,112.117,18.296)
C2: (58.940,107.810,17.463)
N1: (60.239,107.669,17.753)
N3: (58.211,108.921,17.368)
N6: (62.267,108.638,18.272)
N7: (60.748,111.321,18.157)
N9: (58.571,111.322,17.589)
O5': (58.667,115.227,17.705)
O3': (55.166,114.263,18.878)
OP2: (60.652,116.053,18.948)
C3': (56.364,113.631,18.433)
C1': (57.253,111.819,17.189)
C5': (57.461,115.359,16.927)
O4': (57.443,113.003,16.436)
C8: (59.678,112.051,17.948)
O2': (54.964,111.713,17.837)
C6: (60.969,108.778,18.001)
C5: (60.310,110.021,17.946)
C4: (58.965,110.005,17.621)
P: (59.651,116.458,17.936)
C4': (56.662,114.080,17.010)
C2': (56.237,112.117,18.296)
C2: (58.940,107.810,17.463)
N1: (60.239,107.669,17.753)
N3: (58.211,108.921,17.368)
N6: (62.267,108.638,18.272)
N7: (60.748,111.321,18.157)
N9: (58.571,111.322,17.589)
O5': (58.667,115.227,17.705)
O3': (55.166,114.263,18.878)
Image (generated by PyMOL):