ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01867:02112

Extra

PDB:
ATOM 1 O3' G A1866 106.111 90.182 56.773 1.00 65.05 O
ATOM 2 P A A1867 105.961 89.238 55.478 1.00 64.17 P
ATOM 3 OP1 A A1867 105.112 88.088 55.880 1.00 63.67 O
ATOM 4 OP2 A A1867 107.314 88.990 54.911 1.00 63.52 O
ATOM 5 O5' A A1867 105.135 90.120 54.435 1.00 62.44 O
ATOM 6 C5' A A1867 103.738 90.411 54.652 1.00 58.60 C
ATOM 7 C4' A A1867 103.287 91.534 53.750 1.00 56.94 C
ATOM 8 O4' A A1867 104.101 92.710 54.007 1.00 55.54 O
ATOM 9 C3' A A1867 103.458 91.302 52.258 1.00 56.94 C
ATOM 10 O3' A A1867 102.385 90.530 51.724 1.00 57.95 O
ATOM 11 C2' A A1867 103.479 92.726 51.712 1.00 55.75 C
ATOM 12 O2' A A1867 102.187 93.293 51.630 1.00 57.55 O
ATOM 13 C1' A A1867 104.250 93.456 52.811 1.00 53.76 C
ATOM 14 N9 A A1867 105.678 93.640 52.547 1.00 51.60 N
ATOM 15 C8 A A1867 106.715 92.778 52.798 1.00 50.04 C
ATOM 16 N7 A A1867 107.891 93.260 52.479 1.00 48.90 N
ATOM 17 C5 A A1867 107.610 94.519 51.975 1.00 49.09 C
ATOM 18 C6 A A1867 108.433 95.542 51.474 1.00 51.16 C
ATOM 19 N6 A A1867 109.764 95.448 51.375 1.00 51.16 N
ATOM 20 N1 A A1867 107.836 96.682 51.063 1.00 51.94 N
ATOM 21 C2 A A1867 106.501 96.769 51.142 1.00 53.54 C
ATOM 22 N3 A A1867 105.623 95.876 51.587 1.00 51.30 N
ATOM 23 C4 A A1867 106.250 94.762 51.999 1.00 50.42 C
ATOM 24 P A A1868 102.573 89.758 50.324 1.00 57.81 P
ATOM 25 OP1 A A1868 101.343 88.962 50.102 1.00 57.47 O
ATOM 26 OP2 A A1868 103.895 89.079 50.328 1.00 58.79 O
ATOM 27 O5' A A1868 102.603 90.924 49.240 1.00 57.55 O
TER

ATOM 1 O3' U B2111 97.645 99.096 47.242 1.00 50.07 O
ATOM 2 P A B2112 97.332 98.867 48.810 1.00 52.95 P
ATOM 3 OP1 A B2112 96.312 97.779 48.888 1.00 52.18 O
ATOM 4 OP2 A B2112 97.050 100.189 49.446 1.00 51.18 O
ATOM 5 O5' A B2112 98.690 98.295 49.416 1.00 50.10 O
ATOM 6 C5' A B2112 99.057 96.916 49.219 1.00 51.25 C
ATOM 7 C4' A B2112 100.435 96.655 49.768 1.00 50.66 C
ATOM 8 O4' A B2112 101.377 97.552 49.123 1.00 50.06 O
ATOM 9 C3' A B2112 100.626 96.940 51.249 1.00 51.91 C
ATOM 10 O3' A B2112 100.183 95.861 52.052 1.00 54.34 O
ATOM 11 C2' A B2112 102.132 97.139 51.334 1.00 51.54 C
ATOM 12 O2' A B2112 102.847 95.920 51.277 1.00 52.43 O
ATOM 13 C1' A B2112 102.390 97.922 50.046 1.00 49.18 C
ATOM 14 N9 A B2112 102.316 99.369 50.253 1.00 45.98 N
ATOM 15 C8 A B2112 101.281 100.221 49.959 1.00 44.65 C
ATOM 16 N7 A B2112 101.528 101.472 50.247 1.00 42.55 N
ATOM 17 C5 A B2112 102.811 101.445 50.766 1.00 42.27 C
ATOM 18 C6 A B2112 103.648 102.451 51.239 1.00 40.62 C
ATOM 19 N6 A B2112 103.311 103.737 51.244 1.00 42.96 N
ATOM 20 N1 A B2112 104.861 102.095 51.702 1.00 40.82 N
ATOM 21 C2 A B2112 105.207 100.804 51.670 1.00 42.68 C
ATOM 22 N3 A B2112 104.512 99.760 51.234 1.00 44.43 N
ATOM 23 C4 A B2112 103.305 100.155 50.789 1.00 45.03 C
ATOM 24 P G B2113 99.488 96.155 53.470 1.00 56.00 P
ATOM 25 OP1 G B2113 98.696 94.941 53.797 1.00 55.21 O
ATOM 26 OP2 G B2113 98.819 97.477 53.414 1.00 57.18 O
ATOM 27 O5' G B2113 100.705 96.267 54.496 1.00 56.49 O
TER

Atoms:
OP1: (105.112,88.088,55.880)
OP2: (107.314,88.990,54.911)
C3': (103.458,91.302,52.258)
C1': (104.250,93.456,52.811)
C5': (103.738,90.411,54.652)
O4': (104.101,92.710,54.007)
C8: (106.715,92.778,52.798)
O2': (102.187,93.293,51.630)
C6: (108.433,95.542,51.474)
C5: (107.610,94.519,51.975)
C4: (106.250,94.762,51.999)
P: (105.961,89.238,55.478)
C4': (103.287,91.534,53.750)
C2': (103.479,92.726,51.712)
C2: (106.501,96.769,51.142)
N1: (107.836,96.682,51.063)
N3: (105.623,95.876,51.587)
N6: (109.764,95.448,51.375)
N7: (107.891,93.260,52.479)
N9: (105.678,93.640,52.547)
O5': (105.135,90.120,54.435)
O3': (102.385,90.530,51.724)
OP1: (96.312,97.779,48.888)
OP2: (97.050,100.189,49.446)
C3': (100.626,96.940,51.249)
C1': (102.390,97.922,50.046)
C5': (99.057,96.916,49.219)
O4': (101.377,97.552,49.123)
C8: (101.281,100.221,49.959)
O2': (102.847,95.920,51.277)
C6: (103.648,102.451,51.239)
C5: (102.811,101.445,50.766)
C4: (103.305,100.155,50.789)
P: (97.332,98.867,48.810)
C4': (100.435,96.655,49.768)
C2': (102.132,97.139,51.334)
C2: (105.207,100.804,51.670)
N1: (104.861,102.095,51.702)
N3: (104.512,99.760,51.234)
N6: (103.311,103.737,51.244)
N7: (101.528,101.472,50.247)
N9: (102.316,99.369,50.253)
O5': (98.690,98.295,49.416)
O3': (100.183,95.861,52.052)
Image (generated by PyMOL):
PyMOL image
show in jmol