Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0222:0424
Extra
PDB:
ATOM 1 O3' U A 221 49.768 107.221 20.778 1.00 45.94 O
ATOM 2 P A A 222 49.526 107.329 19.195 1.00 48.17 P
ATOM 3 OP1 A A 222 48.522 108.403 19.007 1.00 46.32 O
ATOM 4 OP2 A A 222 49.276 105.982 18.628 1.00 48.25 O
ATOM 5 O5' A A 222 50.931 107.829 18.645 1.00 48.22 O
ATOM 6 C5' A A 222 51.507 109.048 19.142 1.00 48.44 C
ATOM 7 C4' A A 222 52.990 109.059 18.905 1.00 47.35 C
ATOM 8 O4' A A 222 53.622 107.988 19.654 1.00 45.63 O
ATOM 9 C3' A A 222 53.412 108.790 17.476 1.00 48.28 C
ATOM 10 O3' A A 222 53.265 109.943 16.663 1.00 51.39 O
ATOM 11 C2' A A 222 54.858 108.333 17.651 1.00 46.97 C
ATOM 12 O2' A A 222 55.776 109.383 17.898 1.00 46.88 O
ATOM 13 C1' A A 222 54.740 107.494 18.923 1.00 46.55 C
ATOM 14 N9 A A 222 54.522 106.082 18.621 1.00 43.32 N
ATOM 15 C8 A A 222 53.332 105.408 18.468 1.00 42.59 C
ATOM 16 N7 A A 222 53.482 104.132 18.208 1.00 42.89 N
ATOM 17 C5 A A 222 54.860 103.953 18.184 1.00 40.79 C
ATOM 18 C6 A A 222 55.664 102.823 17.969 1.00 39.83 C
ATOM 19 N6 A A 222 55.182 101.606 17.729 1.00 41.75 N
ATOM 20 N1 A A 222 57.002 102.986 18.010 1.00 41.11 N
ATOM 21 C2 A A 222 57.492 104.206 18.255 1.00 41.63 C
ATOM 22 N3 A A 222 56.839 105.346 18.478 1.00 42.37 N
ATOM 23 C4 A A 222 55.511 105.147 18.430 1.00 41.62 C
ATOM 24 P C A 223 53.447 109.812 15.074 1.00 52.26 P
ATOM 25 OP1 C A 223 53.356 111.180 14.496 1.00 54.67 O
ATOM 26 OP2 C A 223 52.565 108.728 14.558 1.00 51.77 O
ATOM 27 O5' C A 223 54.955 109.333 14.947 1.00 52.59 O
TER
ATOM 1 O3' A B 423 60.467 117.014 16.492 1.00 49.54 O
ATOM 2 P A B 424 59.785 116.944 17.939 1.00 49.27 P
ATOM 3 OP1 A B 424 59.034 118.205 18.150 1.00 50.71 O
ATOM 4 OP2 A B 424 60.824 116.538 18.908 1.00 49.97 O
ATOM 5 O5' A B 424 58.744 115.747 17.810 1.00 51.12 O
ATOM 6 C5' A B 424 57.556 115.868 17.010 1.00 49.72 C
ATOM 7 C4' A B 424 56.784 114.572 17.053 1.00 48.48 C
ATOM 8 O4' A B 424 57.580 113.529 16.444 1.00 46.26 O
ATOM 9 C3' A B 424 56.501 114.071 18.459 1.00 48.31 C
ATOM 10 O3' A B 424 55.309 114.673 18.947 1.00 50.46 O
ATOM 11 C2' A B 424 56.381 112.562 18.272 1.00 46.67 C
ATOM 12 O2' A B 424 55.106 112.153 17.826 1.00 42.87 O
ATOM 13 C1' A B 424 57.398 112.313 17.153 1.00 46.16 C
ATOM 14 N9 A B 424 58.717 111.832 17.565 1.00 43.95 N
ATOM 15 C8 A B 424 59.818 112.583 17.892 1.00 42.97 C
ATOM 16 N7 A B 424 60.892 111.871 18.123 1.00 43.74 N
ATOM 17 C5 A B 424 60.467 110.561 17.953 1.00 42.77 C
ATOM 18 C6 A B 424 61.141 109.332 18.030 1.00 42.41 C
ATOM 19 N6 A B 424 62.449 109.220 18.274 1.00 41.89 N
ATOM 20 N1 A B 424 60.421 108.206 17.832 1.00 42.70 N
ATOM 21 C2 A B 424 59.116 108.320 17.563 1.00 43.37 C
ATOM 22 N3 A B 424 58.371 109.420 17.444 1.00 45.25 N
ATOM 23 C4 A B 424 59.119 110.521 17.648 1.00 44.10 C
ATOM 24 P A B 425 55.196 115.079 20.496 1.00 54.30 P
ATOM 25 OP1 A B 425 54.010 115.965 20.608 1.00 55.33 O
ATOM 26 OP2 A B 425 56.524 115.547 20.996 1.00 53.44 O
ATOM 27 O5' A B 425 54.847 113.709 21.227 1.00 54.46 O
TER
ATOM 2 P A A 222 49.526 107.329 19.195 1.00 48.17 P
ATOM 3 OP1 A A 222 48.522 108.403 19.007 1.00 46.32 O
ATOM 4 OP2 A A 222 49.276 105.982 18.628 1.00 48.25 O
ATOM 5 O5' A A 222 50.931 107.829 18.645 1.00 48.22 O
ATOM 6 C5' A A 222 51.507 109.048 19.142 1.00 48.44 C
ATOM 7 C4' A A 222 52.990 109.059 18.905 1.00 47.35 C
ATOM 8 O4' A A 222 53.622 107.988 19.654 1.00 45.63 O
ATOM 9 C3' A A 222 53.412 108.790 17.476 1.00 48.28 C
ATOM 10 O3' A A 222 53.265 109.943 16.663 1.00 51.39 O
ATOM 11 C2' A A 222 54.858 108.333 17.651 1.00 46.97 C
ATOM 12 O2' A A 222 55.776 109.383 17.898 1.00 46.88 O
ATOM 13 C1' A A 222 54.740 107.494 18.923 1.00 46.55 C
ATOM 14 N9 A A 222 54.522 106.082 18.621 1.00 43.32 N
ATOM 15 C8 A A 222 53.332 105.408 18.468 1.00 42.59 C
ATOM 16 N7 A A 222 53.482 104.132 18.208 1.00 42.89 N
ATOM 17 C5 A A 222 54.860 103.953 18.184 1.00 40.79 C
ATOM 18 C6 A A 222 55.664 102.823 17.969 1.00 39.83 C
ATOM 19 N6 A A 222 55.182 101.606 17.729 1.00 41.75 N
ATOM 20 N1 A A 222 57.002 102.986 18.010 1.00 41.11 N
ATOM 21 C2 A A 222 57.492 104.206 18.255 1.00 41.63 C
ATOM 22 N3 A A 222 56.839 105.346 18.478 1.00 42.37 N
ATOM 23 C4 A A 222 55.511 105.147 18.430 1.00 41.62 C
ATOM 24 P C A 223 53.447 109.812 15.074 1.00 52.26 P
ATOM 25 OP1 C A 223 53.356 111.180 14.496 1.00 54.67 O
ATOM 26 OP2 C A 223 52.565 108.728 14.558 1.00 51.77 O
ATOM 27 O5' C A 223 54.955 109.333 14.947 1.00 52.59 O
TER
ATOM 1 O3' A B 423 60.467 117.014 16.492 1.00 49.54 O
ATOM 2 P A B 424 59.785 116.944 17.939 1.00 49.27 P
ATOM 3 OP1 A B 424 59.034 118.205 18.150 1.00 50.71 O
ATOM 4 OP2 A B 424 60.824 116.538 18.908 1.00 49.97 O
ATOM 5 O5' A B 424 58.744 115.747 17.810 1.00 51.12 O
ATOM 6 C5' A B 424 57.556 115.868 17.010 1.00 49.72 C
ATOM 7 C4' A B 424 56.784 114.572 17.053 1.00 48.48 C
ATOM 8 O4' A B 424 57.580 113.529 16.444 1.00 46.26 O
ATOM 9 C3' A B 424 56.501 114.071 18.459 1.00 48.31 C
ATOM 10 O3' A B 424 55.309 114.673 18.947 1.00 50.46 O
ATOM 11 C2' A B 424 56.381 112.562 18.272 1.00 46.67 C
ATOM 12 O2' A B 424 55.106 112.153 17.826 1.00 42.87 O
ATOM 13 C1' A B 424 57.398 112.313 17.153 1.00 46.16 C
ATOM 14 N9 A B 424 58.717 111.832 17.565 1.00 43.95 N
ATOM 15 C8 A B 424 59.818 112.583 17.892 1.00 42.97 C
ATOM 16 N7 A B 424 60.892 111.871 18.123 1.00 43.74 N
ATOM 17 C5 A B 424 60.467 110.561 17.953 1.00 42.77 C
ATOM 18 C6 A B 424 61.141 109.332 18.030 1.00 42.41 C
ATOM 19 N6 A B 424 62.449 109.220 18.274 1.00 41.89 N
ATOM 20 N1 A B 424 60.421 108.206 17.832 1.00 42.70 N
ATOM 21 C2 A B 424 59.116 108.320 17.563 1.00 43.37 C
ATOM 22 N3 A B 424 58.371 109.420 17.444 1.00 45.25 N
ATOM 23 C4 A B 424 59.119 110.521 17.648 1.00 44.10 C
ATOM 24 P A B 425 55.196 115.079 20.496 1.00 54.30 P
ATOM 25 OP1 A B 425 54.010 115.965 20.608 1.00 55.33 O
ATOM 26 OP2 A B 425 56.524 115.547 20.996 1.00 53.44 O
ATOM 27 O5' A B 425 54.847 113.709 21.227 1.00 54.46 O
TER
Atoms:
OP1: (48.522,108.403,19.007)
OP2: (49.276,105.982,18.628)
C3': (53.412,108.790,17.476)
C1': (54.740,107.494,18.923)
C5': (51.507,109.048,19.142)
O4': (53.622,107.988,19.654)
C8: (53.332,105.408,18.468)
O2': (55.776,109.383,17.898)
C6: (55.664,102.823,17.969)
C5: (54.860,103.953,18.184)
C4: (55.511,105.147,18.430)
P: (49.526,107.329,19.195)
C4': (52.990,109.059,18.905)
C2': (54.858,108.333,17.651)
C2: (57.492,104.206,18.255)
N1: (57.002,102.986,18.010)
N3: (56.839,105.346,18.478)
N6: (55.182,101.606,17.729)
N7: (53.482,104.132,18.208)
N9: (54.522,106.082,18.621)
O5': (50.931,107.829,18.645)
O3': (53.265,109.943,16.663)
OP2: (49.276,105.982,18.628)
C3': (53.412,108.790,17.476)
C1': (54.740,107.494,18.923)
C5': (51.507,109.048,19.142)
O4': (53.622,107.988,19.654)
C8: (53.332,105.408,18.468)
O2': (55.776,109.383,17.898)
C6: (55.664,102.823,17.969)
C5: (54.860,103.953,18.184)
C4: (55.511,105.147,18.430)
P: (49.526,107.329,19.195)
C4': (52.990,109.059,18.905)
C2': (54.858,108.333,17.651)
C2: (57.492,104.206,18.255)
N1: (57.002,102.986,18.010)
N3: (56.839,105.346,18.478)
N6: (55.182,101.606,17.729)
N7: (53.482,104.132,18.208)
N9: (54.522,106.082,18.621)
O5': (50.931,107.829,18.645)
O3': (53.265,109.943,16.663)
OP1: (59.034,118.205,18.150)
OP2: (60.824,116.538,18.908)
C3': (56.501,114.071,18.459)
C1': (57.398,112.313,17.153)
C5': (57.556,115.868,17.010)
O4': (57.580,113.529,16.444)
C8: (59.818,112.583,17.892)
O2': (55.106,112.153,17.826)
C6: (61.141,109.332,18.030)
C5: (60.467,110.561,17.953)
C4: (59.119,110.521,17.648)
P: (59.785,116.944,17.939)
C4': (56.784,114.572,17.053)
C2': (56.381,112.562,18.272)
C2: (59.116,108.320,17.563)
N1: (60.421,108.206,17.832)
N3: (58.371,109.420,17.444)
N6: (62.449,109.220,18.274)
N7: (60.892,111.871,18.123)
N9: (58.717,111.832,17.565)
O5': (58.744,115.747,17.810)
O3': (55.309,114.673,18.947)
OP2: (60.824,116.538,18.908)
C3': (56.501,114.071,18.459)
C1': (57.398,112.313,17.153)
C5': (57.556,115.868,17.010)
O4': (57.580,113.529,16.444)
C8: (59.818,112.583,17.892)
O2': (55.106,112.153,17.826)
C6: (61.141,109.332,18.030)
C5: (60.467,110.561,17.953)
C4: (59.119,110.521,17.648)
P: (59.785,116.944,17.939)
C4': (56.784,114.572,17.053)
C2': (56.381,112.562,18.272)
C2: (59.116,108.320,17.563)
N1: (60.421,108.206,17.832)
N3: (58.371,109.420,17.444)
N6: (62.449,109.220,18.274)
N7: (60.892,111.871,18.123)
N9: (58.717,111.832,17.565)
O5': (58.744,115.747,17.810)
O3': (55.309,114.673,18.947)
Image (generated by PyMOL):