Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0222:0424
Extra
PDB:
ATOM 1 O3' U A 221 49.576 106.737 20.776 1.00 44.06 O
ATOM 2 P A A 222 49.339 106.854 19.193 1.00 45.96 P
ATOM 3 OP1 A A 222 48.338 107.938 19.028 1.00 42.54 O
ATOM 4 OP2 A A 222 49.091 105.519 18.588 1.00 44.42 O
ATOM 5 O5' A A 222 50.749 107.347 18.651 1.00 45.10 O
ATOM 6 C5' A A 222 51.348 108.536 19.183 1.00 45.00 C
ATOM 7 C4' A A 222 52.822 108.541 18.905 1.00 44.35 C
ATOM 8 O4' A A 222 53.471 107.478 19.648 1.00 41.20 O
ATOM 9 C3' A A 222 53.209 108.258 17.468 1.00 44.06 C
ATOM 10 O3' A A 222 53.026 109.406 16.650 1.00 48.52 O
ATOM 11 C2' A A 222 54.660 107.819 17.621 1.00 43.38 C
ATOM 12 O2' A A 222 55.564 108.888 17.846 1.00 43.91 O
ATOM 13 C1' A A 222 54.574 106.987 18.902 1.00 41.82 C
ATOM 14 N9 A A 222 54.349 105.575 18.614 1.00 39.84 N
ATOM 15 C8 A A 222 53.152 104.909 18.466 1.00 39.10 C
ATOM 16 N7 A A 222 53.292 103.634 18.202 1.00 39.17 N
ATOM 17 C5 A A 222 54.668 103.447 18.176 1.00 37.12 C
ATOM 18 C6 A A 222 55.459 102.316 17.953 1.00 37.35 C
ATOM 19 N6 A A 222 54.963 101.103 17.712 1.00 40.63 N
ATOM 20 N1 A A 222 56.801 102.468 17.990 1.00 38.86 N
ATOM 21 C2 A A 222 57.301 103.682 18.247 1.00 38.02 C
ATOM 22 N3 A A 222 56.657 104.823 18.481 1.00 39.23 N
ATOM 23 C4 A A 222 55.328 104.634 18.427 1.00 37.87 C
ATOM 24 P C A 223 53.229 109.287 15.061 1.00 49.20 P
ATOM 25 OP1 C A 223 53.146 110.671 14.526 1.00 53.68 O
ATOM 26 OP2 C A 223 52.356 108.225 14.494 1.00 49.18 O
ATOM 27 O5' C A 223 54.737 108.804 14.956 1.00 49.66 O
TER
ATOM 1 O3' A B 423 60.335 116.544 16.570 1.00 47.00 O
ATOM 2 P A B 424 59.621 116.391 17.996 1.00 48.06 P
ATOM 3 OP1 A B 424 58.832 117.621 18.250 1.00 50.12 O
ATOM 4 OP2 A B 424 60.653 115.968 18.969 1.00 48.37 O
ATOM 5 O5' A B 424 58.613 115.172 17.788 1.00 49.08 O
ATOM 6 C5' A B 424 57.419 115.306 16.988 1.00 47.12 C
ATOM 7 C4' A B 424 56.607 114.030 17.056 1.00 46.03 C
ATOM 8 O4' A B 424 57.357 112.951 16.447 1.00 43.33 O
ATOM 9 C3' A B 424 56.303 113.550 18.467 1.00 45.06 C
ATOM 10 O3' A B 424 55.119 114.183 18.944 1.00 47.53 O
ATOM 11 C2' A B 424 56.143 112.043 18.292 1.00 44.33 C
ATOM 12 O2' A B 424 54.855 111.670 17.837 1.00 42.14 O
ATOM 13 C1' A B 424 57.158 111.753 17.180 1.00 43.51 C
ATOM 14 N9 A B 424 58.472 111.256 17.591 1.00 41.28 N
ATOM 15 C8 A B 424 59.575 111.994 17.953 1.00 40.83 C
ATOM 16 N7 A B 424 60.647 111.273 18.168 1.00 39.98 N
ATOM 17 C5 A B 424 60.221 109.971 17.952 1.00 40.50 C
ATOM 18 C6 A B 424 60.890 108.736 17.998 1.00 39.37 C
ATOM 19 N6 A B 424 62.194 108.610 18.249 1.00 39.21 N
ATOM 20 N1 A B 424 60.168 107.620 17.761 1.00 39.32 N
ATOM 21 C2 A B 424 58.866 107.747 17.477 1.00 39.84 C
ATOM 22 N3 A B 424 58.127 108.851 17.381 1.00 41.53 N
ATOM 23 C4 A B 424 58.873 109.943 17.631 1.00 41.48 C
ATOM 24 P A B 425 54.972 114.538 20.506 1.00 52.56 P
ATOM 25 OP1 A B 425 53.777 115.416 20.640 1.00 51.64 O
ATOM 26 OP2 A B 425 56.292 114.994 21.039 1.00 51.48 O
ATOM 27 O5' A B 425 54.632 113.142 21.189 1.00 52.50 O
TER
ATOM 2 P A A 222 49.339 106.854 19.193 1.00 45.96 P
ATOM 3 OP1 A A 222 48.338 107.938 19.028 1.00 42.54 O
ATOM 4 OP2 A A 222 49.091 105.519 18.588 1.00 44.42 O
ATOM 5 O5' A A 222 50.749 107.347 18.651 1.00 45.10 O
ATOM 6 C5' A A 222 51.348 108.536 19.183 1.00 45.00 C
ATOM 7 C4' A A 222 52.822 108.541 18.905 1.00 44.35 C
ATOM 8 O4' A A 222 53.471 107.478 19.648 1.00 41.20 O
ATOM 9 C3' A A 222 53.209 108.258 17.468 1.00 44.06 C
ATOM 10 O3' A A 222 53.026 109.406 16.650 1.00 48.52 O
ATOM 11 C2' A A 222 54.660 107.819 17.621 1.00 43.38 C
ATOM 12 O2' A A 222 55.564 108.888 17.846 1.00 43.91 O
ATOM 13 C1' A A 222 54.574 106.987 18.902 1.00 41.82 C
ATOM 14 N9 A A 222 54.349 105.575 18.614 1.00 39.84 N
ATOM 15 C8 A A 222 53.152 104.909 18.466 1.00 39.10 C
ATOM 16 N7 A A 222 53.292 103.634 18.202 1.00 39.17 N
ATOM 17 C5 A A 222 54.668 103.447 18.176 1.00 37.12 C
ATOM 18 C6 A A 222 55.459 102.316 17.953 1.00 37.35 C
ATOM 19 N6 A A 222 54.963 101.103 17.712 1.00 40.63 N
ATOM 20 N1 A A 222 56.801 102.468 17.990 1.00 38.86 N
ATOM 21 C2 A A 222 57.301 103.682 18.247 1.00 38.02 C
ATOM 22 N3 A A 222 56.657 104.823 18.481 1.00 39.23 N
ATOM 23 C4 A A 222 55.328 104.634 18.427 1.00 37.87 C
ATOM 24 P C A 223 53.229 109.287 15.061 1.00 49.20 P
ATOM 25 OP1 C A 223 53.146 110.671 14.526 1.00 53.68 O
ATOM 26 OP2 C A 223 52.356 108.225 14.494 1.00 49.18 O
ATOM 27 O5' C A 223 54.737 108.804 14.956 1.00 49.66 O
TER
ATOM 1 O3' A B 423 60.335 116.544 16.570 1.00 47.00 O
ATOM 2 P A B 424 59.621 116.391 17.996 1.00 48.06 P
ATOM 3 OP1 A B 424 58.832 117.621 18.250 1.00 50.12 O
ATOM 4 OP2 A B 424 60.653 115.968 18.969 1.00 48.37 O
ATOM 5 O5' A B 424 58.613 115.172 17.788 1.00 49.08 O
ATOM 6 C5' A B 424 57.419 115.306 16.988 1.00 47.12 C
ATOM 7 C4' A B 424 56.607 114.030 17.056 1.00 46.03 C
ATOM 8 O4' A B 424 57.357 112.951 16.447 1.00 43.33 O
ATOM 9 C3' A B 424 56.303 113.550 18.467 1.00 45.06 C
ATOM 10 O3' A B 424 55.119 114.183 18.944 1.00 47.53 O
ATOM 11 C2' A B 424 56.143 112.043 18.292 1.00 44.33 C
ATOM 12 O2' A B 424 54.855 111.670 17.837 1.00 42.14 O
ATOM 13 C1' A B 424 57.158 111.753 17.180 1.00 43.51 C
ATOM 14 N9 A B 424 58.472 111.256 17.591 1.00 41.28 N
ATOM 15 C8 A B 424 59.575 111.994 17.953 1.00 40.83 C
ATOM 16 N7 A B 424 60.647 111.273 18.168 1.00 39.98 N
ATOM 17 C5 A B 424 60.221 109.971 17.952 1.00 40.50 C
ATOM 18 C6 A B 424 60.890 108.736 17.998 1.00 39.37 C
ATOM 19 N6 A B 424 62.194 108.610 18.249 1.00 39.21 N
ATOM 20 N1 A B 424 60.168 107.620 17.761 1.00 39.32 N
ATOM 21 C2 A B 424 58.866 107.747 17.477 1.00 39.84 C
ATOM 22 N3 A B 424 58.127 108.851 17.381 1.00 41.53 N
ATOM 23 C4 A B 424 58.873 109.943 17.631 1.00 41.48 C
ATOM 24 P A B 425 54.972 114.538 20.506 1.00 52.56 P
ATOM 25 OP1 A B 425 53.777 115.416 20.640 1.00 51.64 O
ATOM 26 OP2 A B 425 56.292 114.994 21.039 1.00 51.48 O
ATOM 27 O5' A B 425 54.632 113.142 21.189 1.00 52.50 O
TER
Atoms:
OP1: (48.338,107.938,19.028)
OP2: (49.091,105.519,18.588)
C3': (53.209,108.258,17.468)
C1': (54.574,106.987,18.902)
C5': (51.348,108.536,19.183)
O4': (53.471,107.478,19.648)
C8: (53.152,104.909,18.466)
O2': (55.564,108.888,17.846)
C6: (55.459,102.316,17.953)
C5: (54.668,103.447,18.176)
C4: (55.328,104.634,18.427)
P: (49.339,106.854,19.193)
C4': (52.822,108.541,18.905)
C2': (54.660,107.819,17.621)
C2: (57.301,103.682,18.247)
N1: (56.801,102.468,17.990)
N3: (56.657,104.823,18.481)
N6: (54.963,101.103,17.712)
N7: (53.292,103.634,18.202)
N9: (54.349,105.575,18.614)
O5': (50.749,107.347,18.651)
O3': (53.026,109.406,16.650)
OP2: (49.091,105.519,18.588)
C3': (53.209,108.258,17.468)
C1': (54.574,106.987,18.902)
C5': (51.348,108.536,19.183)
O4': (53.471,107.478,19.648)
C8: (53.152,104.909,18.466)
O2': (55.564,108.888,17.846)
C6: (55.459,102.316,17.953)
C5: (54.668,103.447,18.176)
C4: (55.328,104.634,18.427)
P: (49.339,106.854,19.193)
C4': (52.822,108.541,18.905)
C2': (54.660,107.819,17.621)
C2: (57.301,103.682,18.247)
N1: (56.801,102.468,17.990)
N3: (56.657,104.823,18.481)
N6: (54.963,101.103,17.712)
N7: (53.292,103.634,18.202)
N9: (54.349,105.575,18.614)
O5': (50.749,107.347,18.651)
O3': (53.026,109.406,16.650)
OP1: (58.832,117.621,18.250)
OP2: (60.653,115.968,18.969)
C3': (56.303,113.550,18.467)
C1': (57.158,111.753,17.180)
C5': (57.419,115.306,16.988)
O4': (57.357,112.951,16.447)
C8: (59.575,111.994,17.953)
O2': (54.855,111.670,17.837)
C6: (60.890,108.736,17.998)
C5: (60.221,109.971,17.952)
C4: (58.873,109.943,17.631)
P: (59.621,116.391,17.996)
C4': (56.607,114.030,17.056)
C2': (56.143,112.043,18.292)
C2: (58.866,107.747,17.477)
N1: (60.168,107.620,17.761)
N3: (58.127,108.851,17.381)
N6: (62.194,108.610,18.249)
N7: (60.647,111.273,18.168)
N9: (58.472,111.256,17.591)
O5': (58.613,115.172,17.788)
O3': (55.119,114.183,18.944)
OP2: (60.653,115.968,18.969)
C3': (56.303,113.550,18.467)
C1': (57.158,111.753,17.180)
C5': (57.419,115.306,16.988)
O4': (57.357,112.951,16.447)
C8: (59.575,111.994,17.953)
O2': (54.855,111.670,17.837)
C6: (60.890,108.736,17.998)
C5: (60.221,109.971,17.952)
C4: (58.873,109.943,17.631)
P: (59.621,116.391,17.996)
C4': (56.607,114.030,17.056)
C2': (56.143,112.043,18.292)
C2: (58.866,107.747,17.477)
N1: (60.168,107.620,17.761)
N3: (58.127,108.851,17.381)
N6: (62.194,108.610,18.249)
N7: (60.647,111.273,18.168)
N9: (58.472,111.256,17.591)
O5': (58.613,115.172,17.788)
O3': (55.119,114.183,18.944)
Image (generated by PyMOL):