Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02069:02116
Extra
PDB:
ATOM 1 O3' C A2068 91.463 108.977 55.461 1.00 48.61 O
ATOM 2 P A A2069 92.825 109.311 54.671 1.00 48.55 P
ATOM 3 OP1 A A2069 92.468 109.286 53.230 1.00 47.32 O
ATOM 4 OP2 A A2069 93.915 108.439 55.177 1.00 45.61 O
ATOM 5 O5' A A2069 93.138 110.819 55.086 1.00 45.39 O
ATOM 6 C5' A A2069 94.472 111.337 55.050 1.00 42.66 C
ATOM 7 C4' A A2069 94.563 112.572 55.908 1.00 42.65 C
ATOM 8 O4' A A2069 94.154 112.244 57.260 1.00 42.68 O
ATOM 9 C3' A A2069 95.959 113.151 56.073 1.00 42.43 C
ATOM 10 O3' A A2069 96.303 113.989 54.977 1.00 42.37 O
ATOM 11 C2' A A2069 95.840 113.918 57.384 1.00 41.81 C
ATOM 12 O2' A A2069 95.182 115.163 57.263 1.00 42.52 O
ATOM 13 C1' A A2069 94.933 112.987 58.186 1.00 40.98 C
ATOM 14 N9 A A2069 95.665 112.052 59.038 1.00 37.53 N
ATOM 15 C8 A A2069 95.670 110.687 58.985 1.00 37.18 C
ATOM 16 N7 A A2069 96.388 110.125 59.920 1.00 36.50 N
ATOM 17 C5 A A2069 96.899 111.195 60.633 1.00 36.33 C
ATOM 18 C6 A A2069 97.725 111.266 61.763 1.00 37.03 C
ATOM 19 N6 A A2069 98.186 110.195 62.414 1.00 37.55 N
ATOM 20 N1 A A2069 98.057 112.490 62.218 1.00 37.68 N
ATOM 21 C2 A A2069 97.575 113.562 61.579 1.00 38.45 C
ATOM 22 N3 A A2069 96.781 113.621 60.517 1.00 37.86 N
ATOM 23 C4 A A2069 96.476 112.387 60.090 1.00 36.78 C
ATOM 24 P G A2070 97.722 113.805 54.249 1.00 43.31 P
ATOM 25 OP1 G A2070 97.886 114.994 53.364 1.00 42.06 O
ATOM 26 OP2 G A2070 97.801 112.439 53.667 1.00 42.27 O
ATOM 27 O5' G A2070 98.771 113.892 55.445 1.00 42.15 O
TER
ATOM 1 O3' C B2115 102.953 104.264 67.203 1.00 55.56 O
ATOM 2 P G B2116 101.509 104.444 67.879 1.00 58.21 P
ATOM 3 OP1 G B2116 101.752 104.870 69.279 1.00 60.38 O
ATOM 4 OP2 G B2116 100.666 103.247 67.612 1.00 55.87 O
ATOM 5 O5' G B2116 100.880 105.675 67.086 1.00 59.59 O
ATOM 6 C5' G B2116 101.435 107.006 67.201 1.00 58.47 C
ATOM 7 C4' G B2116 100.655 107.968 66.335 1.00 57.77 C
ATOM 8 O4' G B2116 100.870 107.648 64.936 1.00 57.51 O
ATOM 9 C3' G B2116 99.150 107.868 66.501 1.00 57.98 C
ATOM 10 O3' G B2116 98.691 108.592 67.621 1.00 58.25 O
ATOM 11 C2' G B2116 98.638 108.412 65.180 1.00 58.05 C
ATOM 12 O2' G B2116 98.714 109.819 65.090 1.00 59.85 O
ATOM 13 C1' G B2116 99.651 107.801 64.218 1.00 57.41 C
ATOM 14 N9 G B2116 99.225 106.483 63.766 1.00 55.13 N
ATOM 15 C8 G B2116 99.585 105.271 64.301 1.00 53.98 C
ATOM 16 N7 G B2116 99.064 104.259 63.669 1.00 54.49 N
ATOM 17 C5 G B2116 98.306 104.837 62.661 1.00 54.61 C
ATOM 18 C6 G B2116 97.514 104.236 61.647 1.00 55.37 C
ATOM 19 O6 G B2116 97.334 103.030 61.418 1.00 57.02 O
ATOM 20 N1 G B2116 96.904 105.194 60.844 1.00 54.17 N
ATOM 21 C2 G B2116 97.049 106.549 60.985 1.00 53.41 C
ATOM 22 N2 G B2116 96.377 107.299 60.107 1.00 53.10 N
ATOM 23 N3 G B2116 97.795 107.121 61.916 1.00 52.55 N
ATOM 24 C4 G B2116 98.388 106.211 62.714 1.00 53.89 C
ATOM 25 P G B2117 97.911 107.821 68.788 1.00 60.42 P
ATOM 26 OP1 G B2117 98.803 107.864 69.990 1.00 57.60 O
ATOM 27 OP2 G B2117 97.453 106.506 68.252 1.00 60.59 O
ATOM 28 O5' G B2117 96.611 108.713 69.035 1.00 56.19 O
TER
ATOM 2 P A A2069 92.825 109.311 54.671 1.00 48.55 P
ATOM 3 OP1 A A2069 92.468 109.286 53.230 1.00 47.32 O
ATOM 4 OP2 A A2069 93.915 108.439 55.177 1.00 45.61 O
ATOM 5 O5' A A2069 93.138 110.819 55.086 1.00 45.39 O
ATOM 6 C5' A A2069 94.472 111.337 55.050 1.00 42.66 C
ATOM 7 C4' A A2069 94.563 112.572 55.908 1.00 42.65 C
ATOM 8 O4' A A2069 94.154 112.244 57.260 1.00 42.68 O
ATOM 9 C3' A A2069 95.959 113.151 56.073 1.00 42.43 C
ATOM 10 O3' A A2069 96.303 113.989 54.977 1.00 42.37 O
ATOM 11 C2' A A2069 95.840 113.918 57.384 1.00 41.81 C
ATOM 12 O2' A A2069 95.182 115.163 57.263 1.00 42.52 O
ATOM 13 C1' A A2069 94.933 112.987 58.186 1.00 40.98 C
ATOM 14 N9 A A2069 95.665 112.052 59.038 1.00 37.53 N
ATOM 15 C8 A A2069 95.670 110.687 58.985 1.00 37.18 C
ATOM 16 N7 A A2069 96.388 110.125 59.920 1.00 36.50 N
ATOM 17 C5 A A2069 96.899 111.195 60.633 1.00 36.33 C
ATOM 18 C6 A A2069 97.725 111.266 61.763 1.00 37.03 C
ATOM 19 N6 A A2069 98.186 110.195 62.414 1.00 37.55 N
ATOM 20 N1 A A2069 98.057 112.490 62.218 1.00 37.68 N
ATOM 21 C2 A A2069 97.575 113.562 61.579 1.00 38.45 C
ATOM 22 N3 A A2069 96.781 113.621 60.517 1.00 37.86 N
ATOM 23 C4 A A2069 96.476 112.387 60.090 1.00 36.78 C
ATOM 24 P G A2070 97.722 113.805 54.249 1.00 43.31 P
ATOM 25 OP1 G A2070 97.886 114.994 53.364 1.00 42.06 O
ATOM 26 OP2 G A2070 97.801 112.439 53.667 1.00 42.27 O
ATOM 27 O5' G A2070 98.771 113.892 55.445 1.00 42.15 O
TER
ATOM 1 O3' C B2115 102.953 104.264 67.203 1.00 55.56 O
ATOM 2 P G B2116 101.509 104.444 67.879 1.00 58.21 P
ATOM 3 OP1 G B2116 101.752 104.870 69.279 1.00 60.38 O
ATOM 4 OP2 G B2116 100.666 103.247 67.612 1.00 55.87 O
ATOM 5 O5' G B2116 100.880 105.675 67.086 1.00 59.59 O
ATOM 6 C5' G B2116 101.435 107.006 67.201 1.00 58.47 C
ATOM 7 C4' G B2116 100.655 107.968 66.335 1.00 57.77 C
ATOM 8 O4' G B2116 100.870 107.648 64.936 1.00 57.51 O
ATOM 9 C3' G B2116 99.150 107.868 66.501 1.00 57.98 C
ATOM 10 O3' G B2116 98.691 108.592 67.621 1.00 58.25 O
ATOM 11 C2' G B2116 98.638 108.412 65.180 1.00 58.05 C
ATOM 12 O2' G B2116 98.714 109.819 65.090 1.00 59.85 O
ATOM 13 C1' G B2116 99.651 107.801 64.218 1.00 57.41 C
ATOM 14 N9 G B2116 99.225 106.483 63.766 1.00 55.13 N
ATOM 15 C8 G B2116 99.585 105.271 64.301 1.00 53.98 C
ATOM 16 N7 G B2116 99.064 104.259 63.669 1.00 54.49 N
ATOM 17 C5 G B2116 98.306 104.837 62.661 1.00 54.61 C
ATOM 18 C6 G B2116 97.514 104.236 61.647 1.00 55.37 C
ATOM 19 O6 G B2116 97.334 103.030 61.418 1.00 57.02 O
ATOM 20 N1 G B2116 96.904 105.194 60.844 1.00 54.17 N
ATOM 21 C2 G B2116 97.049 106.549 60.985 1.00 53.41 C
ATOM 22 N2 G B2116 96.377 107.299 60.107 1.00 53.10 N
ATOM 23 N3 G B2116 97.795 107.121 61.916 1.00 52.55 N
ATOM 24 C4 G B2116 98.388 106.211 62.714 1.00 53.89 C
ATOM 25 P G B2117 97.911 107.821 68.788 1.00 60.42 P
ATOM 26 OP1 G B2117 98.803 107.864 69.990 1.00 57.60 O
ATOM 27 OP2 G B2117 97.453 106.506 68.252 1.00 60.59 O
ATOM 28 O5' G B2117 96.611 108.713 69.035 1.00 56.19 O
TER
Atoms:
OP1: (92.468,109.286,53.230)
OP2: (93.915,108.439,55.177)
C3': (95.959,113.151,56.073)
C1': (94.933,112.987,58.186)
C5': (94.472,111.337,55.050)
O4': (94.154,112.244,57.260)
C8: (95.670,110.687,58.985)
O2': (95.182,115.163,57.263)
C6: (97.725,111.266,61.763)
C5: (96.899,111.195,60.633)
C4: (96.476,112.387,60.090)
P: (92.825,109.311,54.671)
C4': (94.563,112.572,55.908)
C2': (95.840,113.918,57.384)
C2: (97.575,113.562,61.579)
N1: (98.057,112.490,62.218)
N3: (96.781,113.621,60.517)
N6: (98.186,110.195,62.414)
N7: (96.388,110.125,59.920)
N9: (95.665,112.052,59.038)
O5': (93.138,110.819,55.086)
O3': (96.303,113.989,54.977)
OP2: (93.915,108.439,55.177)
C3': (95.959,113.151,56.073)
C1': (94.933,112.987,58.186)
C5': (94.472,111.337,55.050)
O4': (94.154,112.244,57.260)
C8: (95.670,110.687,58.985)
O2': (95.182,115.163,57.263)
C6: (97.725,111.266,61.763)
C5: (96.899,111.195,60.633)
C4: (96.476,112.387,60.090)
P: (92.825,109.311,54.671)
C4': (94.563,112.572,55.908)
C2': (95.840,113.918,57.384)
C2: (97.575,113.562,61.579)
N1: (98.057,112.490,62.218)
N3: (96.781,113.621,60.517)
N6: (98.186,110.195,62.414)
N7: (96.388,110.125,59.920)
N9: (95.665,112.052,59.038)
O5': (93.138,110.819,55.086)
O3': (96.303,113.989,54.977)
OP1: (101.752,104.870,69.279)
OP2: (100.666,103.247,67.612)
C3': (99.150,107.868,66.501)
C1': (99.651,107.801,64.218)
C5': (101.435,107.006,67.201)
O6: (97.334,103.030,61.418)
O4': (100.870,107.648,64.936)
C8: (99.585,105.271,64.301)
C2: (97.049,106.549,60.985)
C6: (97.514,104.236,61.647)
C5: (98.306,104.837,62.661)
C4: (98.388,106.211,62.714)
P: (101.509,104.444,67.879)
C4': (100.655,107.968,66.335)
C2': (98.638,108.412,65.180)
O2': (98.714,109.819,65.090)
N1: (96.904,105.194,60.844)
N2: (96.377,107.299,60.107)
N3: (97.795,107.121,61.916)
N7: (99.064,104.259,63.669)
N9: (99.225,106.483,63.766)
O5': (100.880,105.675,67.086)
O3': (98.691,108.592,67.621)
OP2: (100.666,103.247,67.612)
C3': (99.150,107.868,66.501)
C1': (99.651,107.801,64.218)
C5': (101.435,107.006,67.201)
O6: (97.334,103.030,61.418)
O4': (100.870,107.648,64.936)
C8: (99.585,105.271,64.301)
C2: (97.049,106.549,60.985)
C6: (97.514,104.236,61.647)
C5: (98.306,104.837,62.661)
C4: (98.388,106.211,62.714)
P: (101.509,104.444,67.879)
C4': (100.655,107.968,66.335)
C2': (98.638,108.412,65.180)
O2': (98.714,109.819,65.090)
N1: (96.904,105.194,60.844)
N2: (96.377,107.299,60.107)
N3: (97.795,107.121,61.916)
N7: (99.064,104.259,63.669)
N9: (99.225,106.483,63.766)
O5': (100.880,105.675,67.086)
O3': (98.691,108.592,67.621)
Image (generated by PyMOL):