Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01867:02112
Extra
PDB:
ATOM 1 O3' G A1866 106.211 91.490 57.049 1.00 58.64 O
ATOM 2 P A A1867 106.041 90.427 55.854 1.00 58.21 P
ATOM 3 OP1 A A1867 105.189 89.328 56.389 1.00 57.59 O
ATOM 4 OP2 A A1867 107.385 90.116 55.293 1.00 58.22 O
ATOM 5 O5' A A1867 105.202 91.205 54.744 1.00 55.86 O
ATOM 6 C5' A A1867 103.818 91.523 54.966 1.00 52.96 C
ATOM 7 C4' A A1867 103.396 92.671 54.088 1.00 52.06 C
ATOM 8 O4' A A1867 104.203 93.836 54.387 1.00 51.02 O
ATOM 9 C3' A A1867 103.595 92.477 52.598 1.00 52.67 C
ATOM 10 O3' A A1867 102.533 91.724 52.041 1.00 54.30 O
ATOM 11 C2' A A1867 103.595 93.911 52.092 1.00 52.00 C
ATOM 12 O2' A A1867 102.294 94.455 52.015 1.00 51.20 O
ATOM 13 C1' A A1867 104.354 94.618 53.215 1.00 51.03 C
ATOM 14 N9 A A1867 105.780 94.789 52.946 1.00 49.50 N
ATOM 15 C8 A A1867 106.813 93.934 53.222 1.00 49.29 C
ATOM 16 N7 A A1867 107.990 94.403 52.886 1.00 50.87 N
ATOM 17 C5 A A1867 107.711 95.648 52.343 1.00 50.28 C
ATOM 18 C6 A A1867 108.533 96.659 51.809 1.00 51.37 C
ATOM 19 N6 A A1867 109.864 96.573 51.725 1.00 50.36 N
ATOM 20 N1 A A1867 107.932 97.779 51.355 1.00 52.50 N
ATOM 21 C2 A A1867 106.598 97.868 51.436 1.00 52.46 C
ATOM 22 N3 A A1867 105.723 96.990 51.916 1.00 50.45 N
ATOM 23 C4 A A1867 106.352 95.892 52.362 1.00 49.84 C
ATOM 24 P A A1868 102.778 90.875 50.702 1.00 56.41 P
ATOM 25 OP1 A A1868 101.577 90.016 50.528 1.00 54.23 O
ATOM 26 OP2 A A1868 104.133 90.259 50.776 1.00 53.56 O
ATOM 27 O5' A A1868 102.773 91.966 49.544 1.00 53.62 O
TER
ATOM 1 O3' U B2111 97.841 100.183 47.559 1.00 45.57 O
ATOM 2 P A B2112 97.489 100.062 49.127 1.00 48.01 P
ATOM 3 OP1 A B2112 96.380 99.068 49.223 1.00 47.21 O
ATOM 4 OP2 A B2112 97.313 101.424 49.705 1.00 44.38 O
ATOM 5 O5' A B2112 98.789 99.409 49.775 1.00 45.56 O
ATOM 6 C5' A B2112 99.127 98.035 49.517 1.00 45.33 C
ATOM 7 C4' A B2112 100.502 97.727 50.050 1.00 46.76 C
ATOM 8 O4' A B2112 101.470 98.573 49.380 1.00 47.11 O
ATOM 9 C3' A B2112 100.725 98.023 51.527 1.00 46.85 C
ATOM 10 O3' A B2112 100.257 96.968 52.350 1.00 47.24 O
ATOM 11 C2' A B2112 102.234 98.176 51.590 1.00 45.26 C
ATOM 12 O2' A B2112 102.896 96.929 51.520 1.00 45.97 O
ATOM 13 C1' A B2112 102.499 98.931 50.290 1.00 44.89 C
ATOM 14 N9 A B2112 102.461 100.378 50.473 1.00 44.59 N
ATOM 15 C8 A B2112 101.449 101.252 50.157 1.00 42.99 C
ATOM 16 N7 A B2112 101.724 102.501 50.433 1.00 42.33 N
ATOM 17 C5 A B2112 103.002 102.448 50.972 1.00 43.50 C
ATOM 18 C6 A B2112 103.863 103.441 51.463 1.00 43.58 C
ATOM 19 N6 A B2112 103.559 104.742 51.484 1.00 41.76 N
ATOM 20 N1 A B2112 105.065 103.048 51.936 1.00 43.38 N
ATOM 21 C2 A B2112 105.374 101.746 51.907 1.00 42.85 C
ATOM 22 N3 A B2112 104.655 100.722 51.466 1.00 43.54 N
ATOM 23 C4 A B2112 103.465 101.146 51.006 1.00 44.72 C
ATOM 24 P G B2113 99.635 97.297 53.793 1.00 48.43 P
ATOM 25 OP1 G B2113 98.819 96.105 54.158 1.00 48.05 O
ATOM 26 OP2 G B2113 99.004 98.640 53.782 1.00 48.17 O
ATOM 27 O5' G B2113 100.901 97.385 54.756 1.00 47.19 O
TER
ATOM 2 P A A1867 106.041 90.427 55.854 1.00 58.21 P
ATOM 3 OP1 A A1867 105.189 89.328 56.389 1.00 57.59 O
ATOM 4 OP2 A A1867 107.385 90.116 55.293 1.00 58.22 O
ATOM 5 O5' A A1867 105.202 91.205 54.744 1.00 55.86 O
ATOM 6 C5' A A1867 103.818 91.523 54.966 1.00 52.96 C
ATOM 7 C4' A A1867 103.396 92.671 54.088 1.00 52.06 C
ATOM 8 O4' A A1867 104.203 93.836 54.387 1.00 51.02 O
ATOM 9 C3' A A1867 103.595 92.477 52.598 1.00 52.67 C
ATOM 10 O3' A A1867 102.533 91.724 52.041 1.00 54.30 O
ATOM 11 C2' A A1867 103.595 93.911 52.092 1.00 52.00 C
ATOM 12 O2' A A1867 102.294 94.455 52.015 1.00 51.20 O
ATOM 13 C1' A A1867 104.354 94.618 53.215 1.00 51.03 C
ATOM 14 N9 A A1867 105.780 94.789 52.946 1.00 49.50 N
ATOM 15 C8 A A1867 106.813 93.934 53.222 1.00 49.29 C
ATOM 16 N7 A A1867 107.990 94.403 52.886 1.00 50.87 N
ATOM 17 C5 A A1867 107.711 95.648 52.343 1.00 50.28 C
ATOM 18 C6 A A1867 108.533 96.659 51.809 1.00 51.37 C
ATOM 19 N6 A A1867 109.864 96.573 51.725 1.00 50.36 N
ATOM 20 N1 A A1867 107.932 97.779 51.355 1.00 52.50 N
ATOM 21 C2 A A1867 106.598 97.868 51.436 1.00 52.46 C
ATOM 22 N3 A A1867 105.723 96.990 51.916 1.00 50.45 N
ATOM 23 C4 A A1867 106.352 95.892 52.362 1.00 49.84 C
ATOM 24 P A A1868 102.778 90.875 50.702 1.00 56.41 P
ATOM 25 OP1 A A1868 101.577 90.016 50.528 1.00 54.23 O
ATOM 26 OP2 A A1868 104.133 90.259 50.776 1.00 53.56 O
ATOM 27 O5' A A1868 102.773 91.966 49.544 1.00 53.62 O
TER
ATOM 1 O3' U B2111 97.841 100.183 47.559 1.00 45.57 O
ATOM 2 P A B2112 97.489 100.062 49.127 1.00 48.01 P
ATOM 3 OP1 A B2112 96.380 99.068 49.223 1.00 47.21 O
ATOM 4 OP2 A B2112 97.313 101.424 49.705 1.00 44.38 O
ATOM 5 O5' A B2112 98.789 99.409 49.775 1.00 45.56 O
ATOM 6 C5' A B2112 99.127 98.035 49.517 1.00 45.33 C
ATOM 7 C4' A B2112 100.502 97.727 50.050 1.00 46.76 C
ATOM 8 O4' A B2112 101.470 98.573 49.380 1.00 47.11 O
ATOM 9 C3' A B2112 100.725 98.023 51.527 1.00 46.85 C
ATOM 10 O3' A B2112 100.257 96.968 52.350 1.00 47.24 O
ATOM 11 C2' A B2112 102.234 98.176 51.590 1.00 45.26 C
ATOM 12 O2' A B2112 102.896 96.929 51.520 1.00 45.97 O
ATOM 13 C1' A B2112 102.499 98.931 50.290 1.00 44.89 C
ATOM 14 N9 A B2112 102.461 100.378 50.473 1.00 44.59 N
ATOM 15 C8 A B2112 101.449 101.252 50.157 1.00 42.99 C
ATOM 16 N7 A B2112 101.724 102.501 50.433 1.00 42.33 N
ATOM 17 C5 A B2112 103.002 102.448 50.972 1.00 43.50 C
ATOM 18 C6 A B2112 103.863 103.441 51.463 1.00 43.58 C
ATOM 19 N6 A B2112 103.559 104.742 51.484 1.00 41.76 N
ATOM 20 N1 A B2112 105.065 103.048 51.936 1.00 43.38 N
ATOM 21 C2 A B2112 105.374 101.746 51.907 1.00 42.85 C
ATOM 22 N3 A B2112 104.655 100.722 51.466 1.00 43.54 N
ATOM 23 C4 A B2112 103.465 101.146 51.006 1.00 44.72 C
ATOM 24 P G B2113 99.635 97.297 53.793 1.00 48.43 P
ATOM 25 OP1 G B2113 98.819 96.105 54.158 1.00 48.05 O
ATOM 26 OP2 G B2113 99.004 98.640 53.782 1.00 48.17 O
ATOM 27 O5' G B2113 100.901 97.385 54.756 1.00 47.19 O
TER
Atoms:
OP1: (105.189,89.328,56.389)
OP2: (107.385,90.116,55.293)
C3': (103.595,92.477,52.598)
C1': (104.354,94.618,53.215)
C5': (103.818,91.523,54.966)
O4': (104.203,93.836,54.387)
C8: (106.813,93.934,53.222)
O2': (102.294,94.455,52.015)
C6: (108.533,96.659,51.809)
C5: (107.711,95.648,52.343)
C4: (106.352,95.892,52.362)
P: (106.041,90.427,55.854)
C4': (103.396,92.671,54.088)
C2': (103.595,93.911,52.092)
C2: (106.598,97.868,51.436)
N1: (107.932,97.779,51.355)
N3: (105.723,96.990,51.916)
N6: (109.864,96.573,51.725)
N7: (107.990,94.403,52.886)
N9: (105.780,94.789,52.946)
O5': (105.202,91.205,54.744)
O3': (102.533,91.724,52.041)
OP2: (107.385,90.116,55.293)
C3': (103.595,92.477,52.598)
C1': (104.354,94.618,53.215)
C5': (103.818,91.523,54.966)
O4': (104.203,93.836,54.387)
C8: (106.813,93.934,53.222)
O2': (102.294,94.455,52.015)
C6: (108.533,96.659,51.809)
C5: (107.711,95.648,52.343)
C4: (106.352,95.892,52.362)
P: (106.041,90.427,55.854)
C4': (103.396,92.671,54.088)
C2': (103.595,93.911,52.092)
C2: (106.598,97.868,51.436)
N1: (107.932,97.779,51.355)
N3: (105.723,96.990,51.916)
N6: (109.864,96.573,51.725)
N7: (107.990,94.403,52.886)
N9: (105.780,94.789,52.946)
O5': (105.202,91.205,54.744)
O3': (102.533,91.724,52.041)
OP1: (96.380,99.068,49.223)
OP2: (97.313,101.424,49.705)
C3': (100.725,98.023,51.527)
C1': (102.499,98.931,50.290)
C5': (99.127,98.035,49.517)
O4': (101.470,98.573,49.380)
C8: (101.449,101.252,50.157)
O2': (102.896,96.929,51.520)
C6: (103.863,103.441,51.463)
C5: (103.002,102.448,50.972)
C4: (103.465,101.146,51.006)
P: (97.489,100.062,49.127)
C4': (100.502,97.727,50.050)
C2': (102.234,98.176,51.590)
C2: (105.374,101.746,51.907)
N1: (105.065,103.048,51.936)
N3: (104.655,100.722,51.466)
N6: (103.559,104.742,51.484)
N7: (101.724,102.501,50.433)
N9: (102.461,100.378,50.473)
O5': (98.789,99.409,49.775)
O3': (100.257,96.968,52.350)
OP2: (97.313,101.424,49.705)
C3': (100.725,98.023,51.527)
C1': (102.499,98.931,50.290)
C5': (99.127,98.035,49.517)
O4': (101.470,98.573,49.380)
C8: (101.449,101.252,50.157)
O2': (102.896,96.929,51.520)
C6: (103.863,103.441,51.463)
C5: (103.002,102.448,50.972)
C4: (103.465,101.146,51.006)
P: (97.489,100.062,49.127)
C4': (100.502,97.727,50.050)
C2': (102.234,98.176,51.590)
C2: (105.374,101.746,51.907)
N1: (105.065,103.048,51.936)
N3: (104.655,100.722,51.466)
N6: (103.559,104.742,51.484)
N7: (101.724,102.501,50.433)
N9: (102.461,100.378,50.473)
O5': (98.789,99.409,49.775)
O3': (100.257,96.968,52.350)
Image (generated by PyMOL):