Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01867:02112
Extra
PDB:
ATOM 1 O3' G A1866 106.177 91.274 57.139 1.00 58.87 O
ATOM 2 P A A1867 105.925 90.209 55.960 1.00 57.92 P
ATOM 3 OP1 A A1867 105.008 89.181 56.528 1.00 55.46 O
ATOM 4 OP2 A A1867 107.237 89.797 55.385 1.00 56.86 O
ATOM 5 O5' A A1867 105.124 91.037 54.854 1.00 57.01 O
ATOM 6 C5' A A1867 103.735 91.367 55.051 1.00 56.07 C
ATOM 7 C4' A A1867 103.313 92.477 54.120 1.00 55.07 C
ATOM 8 O4' A A1867 104.074 93.676 54.403 1.00 55.32 O
ATOM 9 C3' A A1867 103.554 92.247 52.643 1.00 56.02 C
ATOM 10 O3' A A1867 102.543 91.438 52.071 1.00 57.13 O
ATOM 11 C2' A A1867 103.520 93.666 52.097 1.00 56.08 C
ATOM 12 O2' A A1867 102.208 94.176 51.991 1.00 57.34 O
ATOM 13 C1' A A1867 104.246 94.422 53.208 1.00 54.54 C
ATOM 14 N9 A A1867 105.679 94.577 52.956 1.00 52.28 N
ATOM 15 C8 A A1867 106.694 93.719 53.284 1.00 51.24 C
ATOM 16 N7 A A1867 107.882 94.157 52.953 1.00 51.88 N
ATOM 17 C5 A A1867 107.632 95.382 52.360 1.00 51.14 C
ATOM 18 C6 A A1867 108.480 96.352 51.805 1.00 51.95 C
ATOM 19 N6 A A1867 109.807 96.235 51.755 1.00 51.97 N
ATOM 20 N1 A A1867 107.911 97.466 51.297 1.00 52.72 N
ATOM 21 C2 A A1867 106.580 97.584 51.347 1.00 51.63 C
ATOM 22 N3 A A1867 105.681 96.743 51.842 1.00 51.86 N
ATOM 23 C4 A A1867 106.279 95.649 52.343 1.00 51.42 C
ATOM 24 P A A1868 102.831 90.666 50.696 1.00 58.44 P
ATOM 25 OP1 A A1868 101.655 89.799 50.442 1.00 58.16 O
ATOM 26 OP2 A A1868 104.193 90.070 50.764 1.00 58.70 O
ATOM 27 O5' A A1868 102.842 91.818 49.600 1.00 56.55 O
TER
ATOM 1 O3' U B2111 97.929 99.908 47.584 1.00 46.69 O
ATOM 2 P A B2112 97.527 99.862 49.141 1.00 49.23 P
ATOM 3 OP1 A B2112 96.354 98.949 49.244 1.00 49.91 O
ATOM 4 OP2 A B2112 97.424 101.256 49.659 1.00 46.10 O
ATOM 5 O5' A B2112 98.774 99.164 49.849 1.00 45.85 O
ATOM 6 C5' A B2112 99.163 97.823 49.507 1.00 46.08 C
ATOM 7 C4' A B2112 100.551 97.529 50.031 1.00 47.73 C
ATOM 8 O4' A B2112 101.521 98.384 49.368 1.00 47.62 O
ATOM 9 C3' A B2112 100.777 97.804 51.510 1.00 47.20 C
ATOM 10 O3' A B2112 100.313 96.741 52.320 1.00 47.52 O
ATOM 11 C2' A B2112 102.286 97.959 51.575 1.00 45.16 C
ATOM 12 O2' A B2112 102.949 96.715 51.501 1.00 44.94 O
ATOM 13 C1' A B2112 102.550 98.730 50.284 1.00 44.45 C
ATOM 14 N9 A B2112 102.515 100.175 50.485 1.00 42.64 N
ATOM 15 C8 A B2112 101.510 101.058 50.182 1.00 42.28 C
ATOM 16 N7 A B2112 101.795 102.303 50.468 1.00 42.50 N
ATOM 17 C5 A B2112 103.074 102.234 51.000 1.00 43.60 C
ATOM 18 C6 A B2112 103.947 103.213 51.489 1.00 43.50 C
ATOM 19 N6 A B2112 103.668 104.518 51.498 1.00 45.48 N
ATOM 20 N1 A B2112 105.141 102.804 51.966 1.00 42.27 N
ATOM 21 C2 A B2112 105.436 101.502 51.930 1.00 40.93 C
ATOM 22 N3 A B2112 104.711 100.492 51.481 1.00 42.64 N
ATOM 23 C4 A B2112 103.524 100.928 51.026 1.00 43.83 C
ATOM 24 P G B2113 99.703 97.055 53.768 1.00 48.68 P
ATOM 25 OP1 G B2113 98.892 95.862 54.146 1.00 48.13 O
ATOM 26 OP2 G B2113 99.064 98.390 53.729 1.00 48.50 O
ATOM 27 O5' G B2113 100.983 97.157 54.714 1.00 47.77 O
TER
ATOM 2 P A A1867 105.925 90.209 55.960 1.00 57.92 P
ATOM 3 OP1 A A1867 105.008 89.181 56.528 1.00 55.46 O
ATOM 4 OP2 A A1867 107.237 89.797 55.385 1.00 56.86 O
ATOM 5 O5' A A1867 105.124 91.037 54.854 1.00 57.01 O
ATOM 6 C5' A A1867 103.735 91.367 55.051 1.00 56.07 C
ATOM 7 C4' A A1867 103.313 92.477 54.120 1.00 55.07 C
ATOM 8 O4' A A1867 104.074 93.676 54.403 1.00 55.32 O
ATOM 9 C3' A A1867 103.554 92.247 52.643 1.00 56.02 C
ATOM 10 O3' A A1867 102.543 91.438 52.071 1.00 57.13 O
ATOM 11 C2' A A1867 103.520 93.666 52.097 1.00 56.08 C
ATOM 12 O2' A A1867 102.208 94.176 51.991 1.00 57.34 O
ATOM 13 C1' A A1867 104.246 94.422 53.208 1.00 54.54 C
ATOM 14 N9 A A1867 105.679 94.577 52.956 1.00 52.28 N
ATOM 15 C8 A A1867 106.694 93.719 53.284 1.00 51.24 C
ATOM 16 N7 A A1867 107.882 94.157 52.953 1.00 51.88 N
ATOM 17 C5 A A1867 107.632 95.382 52.360 1.00 51.14 C
ATOM 18 C6 A A1867 108.480 96.352 51.805 1.00 51.95 C
ATOM 19 N6 A A1867 109.807 96.235 51.755 1.00 51.97 N
ATOM 20 N1 A A1867 107.911 97.466 51.297 1.00 52.72 N
ATOM 21 C2 A A1867 106.580 97.584 51.347 1.00 51.63 C
ATOM 22 N3 A A1867 105.681 96.743 51.842 1.00 51.86 N
ATOM 23 C4 A A1867 106.279 95.649 52.343 1.00 51.42 C
ATOM 24 P A A1868 102.831 90.666 50.696 1.00 58.44 P
ATOM 25 OP1 A A1868 101.655 89.799 50.442 1.00 58.16 O
ATOM 26 OP2 A A1868 104.193 90.070 50.764 1.00 58.70 O
ATOM 27 O5' A A1868 102.842 91.818 49.600 1.00 56.55 O
TER
ATOM 1 O3' U B2111 97.929 99.908 47.584 1.00 46.69 O
ATOM 2 P A B2112 97.527 99.862 49.141 1.00 49.23 P
ATOM 3 OP1 A B2112 96.354 98.949 49.244 1.00 49.91 O
ATOM 4 OP2 A B2112 97.424 101.256 49.659 1.00 46.10 O
ATOM 5 O5' A B2112 98.774 99.164 49.849 1.00 45.85 O
ATOM 6 C5' A B2112 99.163 97.823 49.507 1.00 46.08 C
ATOM 7 C4' A B2112 100.551 97.529 50.031 1.00 47.73 C
ATOM 8 O4' A B2112 101.521 98.384 49.368 1.00 47.62 O
ATOM 9 C3' A B2112 100.777 97.804 51.510 1.00 47.20 C
ATOM 10 O3' A B2112 100.313 96.741 52.320 1.00 47.52 O
ATOM 11 C2' A B2112 102.286 97.959 51.575 1.00 45.16 C
ATOM 12 O2' A B2112 102.949 96.715 51.501 1.00 44.94 O
ATOM 13 C1' A B2112 102.550 98.730 50.284 1.00 44.45 C
ATOM 14 N9 A B2112 102.515 100.175 50.485 1.00 42.64 N
ATOM 15 C8 A B2112 101.510 101.058 50.182 1.00 42.28 C
ATOM 16 N7 A B2112 101.795 102.303 50.468 1.00 42.50 N
ATOM 17 C5 A B2112 103.074 102.234 51.000 1.00 43.60 C
ATOM 18 C6 A B2112 103.947 103.213 51.489 1.00 43.50 C
ATOM 19 N6 A B2112 103.668 104.518 51.498 1.00 45.48 N
ATOM 20 N1 A B2112 105.141 102.804 51.966 1.00 42.27 N
ATOM 21 C2 A B2112 105.436 101.502 51.930 1.00 40.93 C
ATOM 22 N3 A B2112 104.711 100.492 51.481 1.00 42.64 N
ATOM 23 C4 A B2112 103.524 100.928 51.026 1.00 43.83 C
ATOM 24 P G B2113 99.703 97.055 53.768 1.00 48.68 P
ATOM 25 OP1 G B2113 98.892 95.862 54.146 1.00 48.13 O
ATOM 26 OP2 G B2113 99.064 98.390 53.729 1.00 48.50 O
ATOM 27 O5' G B2113 100.983 97.157 54.714 1.00 47.77 O
TER
Atoms:
OP1: (105.008,89.181,56.528)
OP2: (107.237,89.797,55.385)
C3': (103.554,92.247,52.643)
C1': (104.246,94.422,53.208)
C5': (103.735,91.367,55.051)
O4': (104.074,93.676,54.403)
C8: (106.694,93.719,53.284)
O2': (102.208,94.176,51.991)
C6: (108.480,96.352,51.805)
C5: (107.632,95.382,52.360)
C4: (106.279,95.649,52.343)
P: (105.925,90.209,55.960)
C4': (103.313,92.477,54.120)
C2': (103.520,93.666,52.097)
C2: (106.580,97.584,51.347)
N1: (107.911,97.466,51.297)
N3: (105.681,96.743,51.842)
N6: (109.807,96.235,51.755)
N7: (107.882,94.157,52.953)
N9: (105.679,94.577,52.956)
O5': (105.124,91.037,54.854)
O3': (102.543,91.438,52.071)
OP2: (107.237,89.797,55.385)
C3': (103.554,92.247,52.643)
C1': (104.246,94.422,53.208)
C5': (103.735,91.367,55.051)
O4': (104.074,93.676,54.403)
C8: (106.694,93.719,53.284)
O2': (102.208,94.176,51.991)
C6: (108.480,96.352,51.805)
C5: (107.632,95.382,52.360)
C4: (106.279,95.649,52.343)
P: (105.925,90.209,55.960)
C4': (103.313,92.477,54.120)
C2': (103.520,93.666,52.097)
C2: (106.580,97.584,51.347)
N1: (107.911,97.466,51.297)
N3: (105.681,96.743,51.842)
N6: (109.807,96.235,51.755)
N7: (107.882,94.157,52.953)
N9: (105.679,94.577,52.956)
O5': (105.124,91.037,54.854)
O3': (102.543,91.438,52.071)
OP1: (96.354,98.949,49.244)
OP2: (97.424,101.256,49.659)
C3': (100.777,97.804,51.510)
C1': (102.550,98.730,50.284)
C5': (99.163,97.823,49.507)
O4': (101.521,98.384,49.368)
C8: (101.510,101.058,50.182)
O2': (102.949,96.715,51.501)
C6: (103.947,103.213,51.489)
C5: (103.074,102.234,51.000)
C4: (103.524,100.928,51.026)
P: (97.527,99.862,49.141)
C4': (100.551,97.529,50.031)
C2': (102.286,97.959,51.575)
C2: (105.436,101.502,51.930)
N1: (105.141,102.804,51.966)
N3: (104.711,100.492,51.481)
N6: (103.668,104.518,51.498)
N7: (101.795,102.303,50.468)
N9: (102.515,100.175,50.485)
O5': (98.774,99.164,49.849)
O3': (100.313,96.741,52.320)
OP2: (97.424,101.256,49.659)
C3': (100.777,97.804,51.510)
C1': (102.550,98.730,50.284)
C5': (99.163,97.823,49.507)
O4': (101.521,98.384,49.368)
C8: (101.510,101.058,50.182)
O2': (102.949,96.715,51.501)
C6: (103.947,103.213,51.489)
C5: (103.074,102.234,51.000)
C4: (103.524,100.928,51.026)
P: (97.527,99.862,49.141)
C4': (100.551,97.529,50.031)
C2': (102.286,97.959,51.575)
C2: (105.436,101.502,51.930)
N1: (105.141,102.804,51.966)
N3: (104.711,100.492,51.481)
N6: (103.668,104.518,51.498)
N7: (101.795,102.303,50.468)
N9: (102.515,100.175,50.485)
O5': (98.774,99.164,49.849)
O3': (100.313,96.741,52.320)
Image (generated by PyMOL):