Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01867:02112
Extra
PDB:
ATOM 1 O3' G A1866 106.505 91.654 57.462 1.00 72.48 O
ATOM 2 P A A1867 106.258 90.516 56.353 1.00 71.45 P
ATOM 3 OP1 A A1867 105.376 89.500 56.985 1.00 68.84 O
ATOM 4 OP2 A A1867 107.589 90.106 55.808 1.00 71.29 O
ATOM 5 O5' A A1867 105.442 91.254 55.196 1.00 69.83 O
ATOM 6 C5' A A1867 104.078 91.668 55.401 1.00 68.19 C
ATOM 7 C4' A A1867 103.701 92.767 54.433 1.00 67.44 C
ATOM 8 O4' A A1867 104.469 93.966 54.701 1.00 67.19 O
ATOM 9 C3' A A1867 103.963 92.499 52.965 1.00 68.24 C
ATOM 10 O3' A A1867 102.933 91.700 52.411 1.00 70.26 O
ATOM 11 C2' A A1867 103.961 93.907 52.383 1.00 68.20 C
ATOM 12 O2' A A1867 102.667 94.445 52.218 1.00 69.06 O
ATOM 13 C1' A A1867 104.650 94.690 53.496 1.00 66.57 C
ATOM 14 N9 A A1867 106.080 94.891 53.275 1.00 65.81 N
ATOM 15 C8 A A1867 107.129 94.092 53.651 1.00 65.51 C
ATOM 16 N7 A A1867 108.305 94.594 53.358 1.00 66.15 N
ATOM 17 C5 A A1867 108.007 95.796 52.735 1.00 65.81 C
ATOM 18 C6 A A1867 108.817 96.812 52.202 1.00 66.70 C
ATOM 19 N6 A A1867 110.153 96.787 52.215 1.00 67.59 N
ATOM 20 N1 A A1867 108.200 97.877 51.646 1.00 67.34 N
ATOM 21 C2 A A1867 106.863 97.908 51.634 1.00 66.42 C
ATOM 22 N3 A A1867 105.998 97.021 52.108 1.00 65.52 N
ATOM 23 C4 A A1867 106.641 95.979 52.656 1.00 65.44 C
ATOM 24 P A A1868 103.154 90.983 50.989 1.00 71.65 P
ATOM 25 OP1 A A1868 101.931 90.166 50.747 1.00 71.12 O
ATOM 26 OP2 A A1868 104.499 90.334 50.968 1.00 70.31 O
ATOM 27 O5' A A1868 103.153 92.184 49.946 1.00 69.01 O
TER
ATOM 1 O3' U B2111 98.244 100.332 47.804 1.00 61.06 O
ATOM 2 P A B2112 97.834 100.196 49.358 1.00 63.71 P
ATOM 3 OP1 A B2112 96.742 99.186 49.420 1.00 63.78 O
ATOM 4 OP2 A B2112 97.624 101.558 49.936 1.00 61.86 O
ATOM 5 O5' A B2112 99.109 99.568 50.078 1.00 61.50 O
ATOM 6 C5' A B2112 99.477 98.196 49.871 1.00 60.26 C
ATOM 7 C4' A B2112 100.851 97.935 50.442 1.00 60.18 C
ATOM 8 O4' A B2112 101.817 98.808 49.800 1.00 59.62 O
ATOM 9 C3' A B2112 101.028 98.224 51.924 1.00 59.13 C
ATOM 10 O3' A B2112 100.581 97.122 52.700 1.00 60.88 O
ATOM 11 C2' A B2112 102.531 98.418 52.028 1.00 57.10 C
ATOM 12 O2' A B2112 103.222 97.188 51.984 1.00 57.99 O
ATOM 13 C1' A B2112 102.818 99.173 50.732 1.00 56.64 C
ATOM 14 N9 A B2112 102.780 100.624 50.890 1.00 55.97 N
ATOM 15 C8 A B2112 101.796 101.498 50.500 1.00 55.41 C
ATOM 16 N7 A B2112 102.067 102.751 50.766 1.00 55.81 N
ATOM 17 C5 A B2112 103.313 102.697 51.374 1.00 55.81 C
ATOM 18 C6 A B2112 104.158 103.690 51.880 1.00 55.86 C
ATOM 19 N6 A B2112 103.870 104.993 51.850 1.00 57.97 N
ATOM 20 N1 A B2112 105.329 103.299 52.422 1.00 54.28 N
ATOM 21 C2 A B2112 105.622 101.999 52.443 1.00 53.07 C
ATOM 22 N3 A B2112 104.917 100.975 51.997 1.00 53.82 N
ATOM 23 C4 A B2112 103.758 101.395 51.465 1.00 55.44 C
ATOM 24 P G B2113 99.967 97.365 54.161 1.00 61.56 P
ATOM 25 OP1 G B2113 99.248 96.112 54.520 1.00 61.26 O
ATOM 26 OP2 G B2113 99.235 98.656 54.163 1.00 61.86 O
ATOM 27 O5' G B2113 101.248 97.506 55.101 1.00 60.19 O
TER
ATOM 2 P A A1867 106.258 90.516 56.353 1.00 71.45 P
ATOM 3 OP1 A A1867 105.376 89.500 56.985 1.00 68.84 O
ATOM 4 OP2 A A1867 107.589 90.106 55.808 1.00 71.29 O
ATOM 5 O5' A A1867 105.442 91.254 55.196 1.00 69.83 O
ATOM 6 C5' A A1867 104.078 91.668 55.401 1.00 68.19 C
ATOM 7 C4' A A1867 103.701 92.767 54.433 1.00 67.44 C
ATOM 8 O4' A A1867 104.469 93.966 54.701 1.00 67.19 O
ATOM 9 C3' A A1867 103.963 92.499 52.965 1.00 68.24 C
ATOM 10 O3' A A1867 102.933 91.700 52.411 1.00 70.26 O
ATOM 11 C2' A A1867 103.961 93.907 52.383 1.00 68.20 C
ATOM 12 O2' A A1867 102.667 94.445 52.218 1.00 69.06 O
ATOM 13 C1' A A1867 104.650 94.690 53.496 1.00 66.57 C
ATOM 14 N9 A A1867 106.080 94.891 53.275 1.00 65.81 N
ATOM 15 C8 A A1867 107.129 94.092 53.651 1.00 65.51 C
ATOM 16 N7 A A1867 108.305 94.594 53.358 1.00 66.15 N
ATOM 17 C5 A A1867 108.007 95.796 52.735 1.00 65.81 C
ATOM 18 C6 A A1867 108.817 96.812 52.202 1.00 66.70 C
ATOM 19 N6 A A1867 110.153 96.787 52.215 1.00 67.59 N
ATOM 20 N1 A A1867 108.200 97.877 51.646 1.00 67.34 N
ATOM 21 C2 A A1867 106.863 97.908 51.634 1.00 66.42 C
ATOM 22 N3 A A1867 105.998 97.021 52.108 1.00 65.52 N
ATOM 23 C4 A A1867 106.641 95.979 52.656 1.00 65.44 C
ATOM 24 P A A1868 103.154 90.983 50.989 1.00 71.65 P
ATOM 25 OP1 A A1868 101.931 90.166 50.747 1.00 71.12 O
ATOM 26 OP2 A A1868 104.499 90.334 50.968 1.00 70.31 O
ATOM 27 O5' A A1868 103.153 92.184 49.946 1.00 69.01 O
TER
ATOM 1 O3' U B2111 98.244 100.332 47.804 1.00 61.06 O
ATOM 2 P A B2112 97.834 100.196 49.358 1.00 63.71 P
ATOM 3 OP1 A B2112 96.742 99.186 49.420 1.00 63.78 O
ATOM 4 OP2 A B2112 97.624 101.558 49.936 1.00 61.86 O
ATOM 5 O5' A B2112 99.109 99.568 50.078 1.00 61.50 O
ATOM 6 C5' A B2112 99.477 98.196 49.871 1.00 60.26 C
ATOM 7 C4' A B2112 100.851 97.935 50.442 1.00 60.18 C
ATOM 8 O4' A B2112 101.817 98.808 49.800 1.00 59.62 O
ATOM 9 C3' A B2112 101.028 98.224 51.924 1.00 59.13 C
ATOM 10 O3' A B2112 100.581 97.122 52.700 1.00 60.88 O
ATOM 11 C2' A B2112 102.531 98.418 52.028 1.00 57.10 C
ATOM 12 O2' A B2112 103.222 97.188 51.984 1.00 57.99 O
ATOM 13 C1' A B2112 102.818 99.173 50.732 1.00 56.64 C
ATOM 14 N9 A B2112 102.780 100.624 50.890 1.00 55.97 N
ATOM 15 C8 A B2112 101.796 101.498 50.500 1.00 55.41 C
ATOM 16 N7 A B2112 102.067 102.751 50.766 1.00 55.81 N
ATOM 17 C5 A B2112 103.313 102.697 51.374 1.00 55.81 C
ATOM 18 C6 A B2112 104.158 103.690 51.880 1.00 55.86 C
ATOM 19 N6 A B2112 103.870 104.993 51.850 1.00 57.97 N
ATOM 20 N1 A B2112 105.329 103.299 52.422 1.00 54.28 N
ATOM 21 C2 A B2112 105.622 101.999 52.443 1.00 53.07 C
ATOM 22 N3 A B2112 104.917 100.975 51.997 1.00 53.82 N
ATOM 23 C4 A B2112 103.758 101.395 51.465 1.00 55.44 C
ATOM 24 P G B2113 99.967 97.365 54.161 1.00 61.56 P
ATOM 25 OP1 G B2113 99.248 96.112 54.520 1.00 61.26 O
ATOM 26 OP2 G B2113 99.235 98.656 54.163 1.00 61.86 O
ATOM 27 O5' G B2113 101.248 97.506 55.101 1.00 60.19 O
TER
Atoms:
OP1: (105.376,89.500,56.985)
OP2: (107.589,90.106,55.808)
C3': (103.963,92.499,52.965)
C1': (104.650,94.690,53.496)
C5': (104.078,91.668,55.401)
O4': (104.469,93.966,54.701)
C8: (107.129,94.092,53.651)
O2': (102.667,94.445,52.218)
C6: (108.817,96.812,52.202)
C5: (108.007,95.796,52.735)
C4: (106.641,95.979,52.656)
P: (106.258,90.516,56.353)
C4': (103.701,92.767,54.433)
C2': (103.961,93.907,52.383)
C2: (106.863,97.908,51.634)
N1: (108.200,97.877,51.646)
N3: (105.998,97.021,52.108)
N6: (110.153,96.787,52.215)
N7: (108.305,94.594,53.358)
N9: (106.080,94.891,53.275)
O5': (105.442,91.254,55.196)
O3': (102.933,91.700,52.411)
OP2: (107.589,90.106,55.808)
C3': (103.963,92.499,52.965)
C1': (104.650,94.690,53.496)
C5': (104.078,91.668,55.401)
O4': (104.469,93.966,54.701)
C8: (107.129,94.092,53.651)
O2': (102.667,94.445,52.218)
C6: (108.817,96.812,52.202)
C5: (108.007,95.796,52.735)
C4: (106.641,95.979,52.656)
P: (106.258,90.516,56.353)
C4': (103.701,92.767,54.433)
C2': (103.961,93.907,52.383)
C2: (106.863,97.908,51.634)
N1: (108.200,97.877,51.646)
N3: (105.998,97.021,52.108)
N6: (110.153,96.787,52.215)
N7: (108.305,94.594,53.358)
N9: (106.080,94.891,53.275)
O5': (105.442,91.254,55.196)
O3': (102.933,91.700,52.411)
OP1: (96.742,99.186,49.420)
OP2: (97.624,101.558,49.936)
C3': (101.028,98.224,51.924)
C1': (102.818,99.173,50.732)
C5': (99.477,98.196,49.871)
O4': (101.817,98.808,49.800)
C8: (101.796,101.498,50.500)
O2': (103.222,97.188,51.984)
C6: (104.158,103.690,51.880)
C5: (103.313,102.697,51.374)
C4: (103.758,101.395,51.465)
P: (97.834,100.196,49.358)
C4': (100.851,97.935,50.442)
C2': (102.531,98.418,52.028)
C2: (105.622,101.999,52.443)
N1: (105.329,103.299,52.422)
N3: (104.917,100.975,51.997)
N6: (103.870,104.993,51.850)
N7: (102.067,102.751,50.766)
N9: (102.780,100.624,50.890)
O5': (99.109,99.568,50.078)
O3': (100.581,97.122,52.700)
OP2: (97.624,101.558,49.936)
C3': (101.028,98.224,51.924)
C1': (102.818,99.173,50.732)
C5': (99.477,98.196,49.871)
O4': (101.817,98.808,49.800)
C8: (101.796,101.498,50.500)
O2': (103.222,97.188,51.984)
C6: (104.158,103.690,51.880)
C5: (103.313,102.697,51.374)
C4: (103.758,101.395,51.465)
P: (97.834,100.196,49.358)
C4': (100.851,97.935,50.442)
C2': (102.531,98.418,52.028)
C2: (105.622,101.999,52.443)
N1: (105.329,103.299,52.422)
N3: (104.917,100.975,51.997)
N6: (103.870,104.993,51.850)
N7: (102.067,102.751,50.766)
N9: (102.780,100.624,50.890)
O5': (99.109,99.568,50.078)
O3': (100.581,97.122,52.700)
Image (generated by PyMOL):