Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0771:01417
Extra
PDB:
ATOM 1 O3' C A 770 102.524 148.385 62.737 1.00 42.31 O
ATOM 2 P A A 771 102.835 149.924 63.059 1.00 44.97 P
ATOM 3 OP1 A A 771 104.215 150.131 62.557 1.00 44.99 O
ATOM 4 OP2 A A 771 102.525 150.208 64.481 1.00 44.36 O
ATOM 5 O5' A A 771 101.790 150.729 62.159 1.00 41.93 O
ATOM 6 C5' A A 771 101.886 150.713 60.721 1.00 42.94 C
ATOM 7 C4' A A 771 100.884 151.669 60.105 1.00 44.19 C
ATOM 8 O4' A A 771 99.535 151.206 60.373 1.00 47.20 O
ATOM 9 C3' A A 771 100.887 153.093 60.628 1.00 45.10 C
ATOM 10 O3' A A 771 101.917 153.884 60.043 1.00 44.17 O
ATOM 11 C2' A A 771 99.480 153.572 60.282 1.00 44.43 C
ATOM 12 O2' A A 771 99.338 153.862 58.907 1.00 43.03 O
ATOM 13 C1' A A 771 98.663 152.316 60.563 1.00 43.71 C
ATOM 14 N9 A A 771 98.108 152.223 61.912 1.00 41.64 N
ATOM 15 C8 A A 771 98.629 151.519 62.969 1.00 42.41 C
ATOM 16 N7 A A 771 97.896 151.570 64.051 1.00 42.01 N
ATOM 17 C5 A A 771 96.825 152.374 63.690 1.00 41.15 C
ATOM 18 C6 A A 771 95.698 152.817 64.400 1.00 40.55 C
ATOM 19 N6 A A 771 95.454 152.497 65.674 1.00 39.07 N
ATOM 20 N1 A A 771 94.820 153.611 63.752 1.00 39.83 N
ATOM 21 C2 A A 771 95.067 153.929 62.481 1.00 40.28 C
ATOM 22 N3 A A 771 96.090 153.574 61.704 1.00 42.58 N
ATOM 23 C4 A A 771 96.946 152.788 62.377 1.00 41.41 C
ATOM 24 P U A 772 102.610 155.037 60.923 1.00 47.44 P
ATOM 25 OP1 U A 772 103.755 155.585 60.160 1.00 47.26 O
ATOM 26 OP2 U A 772 102.830 154.540 62.308 1.00 47.97 O
ATOM 27 O5' U A 772 101.483 156.149 61.036 1.00 44.41 O
TER
ATOM 1 O3' U B1416 102.039 154.888 49.692 1.00 45.89 O
ATOM 2 P A B1417 101.548 153.532 50.399 1.00 47.51 P
ATOM 3 OP1 A B1417 102.749 152.651 50.477 1.00 45.88 O
ATOM 4 OP2 A B1417 100.325 153.054 49.709 1.00 47.24 O
ATOM 5 O5' A B1417 101.144 153.959 51.881 1.00 46.44 O
ATOM 6 C5' A B1417 102.152 154.336 52.832 1.00 45.72 C
ATOM 7 C4' A B1417 101.682 154.088 54.246 1.00 46.47 C
ATOM 8 O4' A B1417 100.702 155.074 54.648 1.00 46.40 O
ATOM 9 C3' A B1417 100.994 152.764 54.524 1.00 47.42 C
ATOM 10 O3' A B1417 101.938 151.709 54.642 1.00 49.15 O
ATOM 11 C2' A B1417 100.279 153.050 55.841 1.00 47.29 C
ATOM 12 O2' A B1417 101.143 152.992 56.959 1.00 47.55 O
ATOM 13 C1' A B1417 99.865 154.510 55.647 1.00 46.35 C
ATOM 14 N9 A B1417 98.468 154.756 55.288 1.00 44.46 N
ATOM 15 C8 A B1417 97.934 154.965 54.042 1.00 43.61 C
ATOM 16 N7 A B1417 96.663 155.289 54.061 1.00 44.75 N
ATOM 17 C5 A B1417 96.330 155.259 55.408 1.00 43.97 C
ATOM 18 C6 A B1417 95.136 155.536 56.096 1.00 43.11 C
ATOM 19 N6 A B1417 94.009 155.924 55.499 1.00 43.74 N
ATOM 20 N1 A B1417 95.141 155.411 57.439 1.00 42.91 N
ATOM 21 C2 A B1417 96.272 155.041 58.040 1.00 43.12 C
ATOM 22 N3 A B1417 97.459 154.762 57.505 1.00 43.47 N
ATOM 23 C4 A B1417 97.423 154.897 56.171 1.00 43.71 C
ATOM 24 P A B1418 101.601 150.266 54.021 1.00 52.50 P
ATOM 25 OP1 A B1418 102.881 149.545 53.738 1.00 49.99 O
ATOM 26 OP2 A B1418 100.607 150.475 52.914 1.00 49.24 O
ATOM 27 O5' A B1418 100.867 149.518 55.223 1.00 48.25 O
TER
ATOM 2 P A A 771 102.835 149.924 63.059 1.00 44.97 P
ATOM 3 OP1 A A 771 104.215 150.131 62.557 1.00 44.99 O
ATOM 4 OP2 A A 771 102.525 150.208 64.481 1.00 44.36 O
ATOM 5 O5' A A 771 101.790 150.729 62.159 1.00 41.93 O
ATOM 6 C5' A A 771 101.886 150.713 60.721 1.00 42.94 C
ATOM 7 C4' A A 771 100.884 151.669 60.105 1.00 44.19 C
ATOM 8 O4' A A 771 99.535 151.206 60.373 1.00 47.20 O
ATOM 9 C3' A A 771 100.887 153.093 60.628 1.00 45.10 C
ATOM 10 O3' A A 771 101.917 153.884 60.043 1.00 44.17 O
ATOM 11 C2' A A 771 99.480 153.572 60.282 1.00 44.43 C
ATOM 12 O2' A A 771 99.338 153.862 58.907 1.00 43.03 O
ATOM 13 C1' A A 771 98.663 152.316 60.563 1.00 43.71 C
ATOM 14 N9 A A 771 98.108 152.223 61.912 1.00 41.64 N
ATOM 15 C8 A A 771 98.629 151.519 62.969 1.00 42.41 C
ATOM 16 N7 A A 771 97.896 151.570 64.051 1.00 42.01 N
ATOM 17 C5 A A 771 96.825 152.374 63.690 1.00 41.15 C
ATOM 18 C6 A A 771 95.698 152.817 64.400 1.00 40.55 C
ATOM 19 N6 A A 771 95.454 152.497 65.674 1.00 39.07 N
ATOM 20 N1 A A 771 94.820 153.611 63.752 1.00 39.83 N
ATOM 21 C2 A A 771 95.067 153.929 62.481 1.00 40.28 C
ATOM 22 N3 A A 771 96.090 153.574 61.704 1.00 42.58 N
ATOM 23 C4 A A 771 96.946 152.788 62.377 1.00 41.41 C
ATOM 24 P U A 772 102.610 155.037 60.923 1.00 47.44 P
ATOM 25 OP1 U A 772 103.755 155.585 60.160 1.00 47.26 O
ATOM 26 OP2 U A 772 102.830 154.540 62.308 1.00 47.97 O
ATOM 27 O5' U A 772 101.483 156.149 61.036 1.00 44.41 O
TER
ATOM 1 O3' U B1416 102.039 154.888 49.692 1.00 45.89 O
ATOM 2 P A B1417 101.548 153.532 50.399 1.00 47.51 P
ATOM 3 OP1 A B1417 102.749 152.651 50.477 1.00 45.88 O
ATOM 4 OP2 A B1417 100.325 153.054 49.709 1.00 47.24 O
ATOM 5 O5' A B1417 101.144 153.959 51.881 1.00 46.44 O
ATOM 6 C5' A B1417 102.152 154.336 52.832 1.00 45.72 C
ATOM 7 C4' A B1417 101.682 154.088 54.246 1.00 46.47 C
ATOM 8 O4' A B1417 100.702 155.074 54.648 1.00 46.40 O
ATOM 9 C3' A B1417 100.994 152.764 54.524 1.00 47.42 C
ATOM 10 O3' A B1417 101.938 151.709 54.642 1.00 49.15 O
ATOM 11 C2' A B1417 100.279 153.050 55.841 1.00 47.29 C
ATOM 12 O2' A B1417 101.143 152.992 56.959 1.00 47.55 O
ATOM 13 C1' A B1417 99.865 154.510 55.647 1.00 46.35 C
ATOM 14 N9 A B1417 98.468 154.756 55.288 1.00 44.46 N
ATOM 15 C8 A B1417 97.934 154.965 54.042 1.00 43.61 C
ATOM 16 N7 A B1417 96.663 155.289 54.061 1.00 44.75 N
ATOM 17 C5 A B1417 96.330 155.259 55.408 1.00 43.97 C
ATOM 18 C6 A B1417 95.136 155.536 56.096 1.00 43.11 C
ATOM 19 N6 A B1417 94.009 155.924 55.499 1.00 43.74 N
ATOM 20 N1 A B1417 95.141 155.411 57.439 1.00 42.91 N
ATOM 21 C2 A B1417 96.272 155.041 58.040 1.00 43.12 C
ATOM 22 N3 A B1417 97.459 154.762 57.505 1.00 43.47 N
ATOM 23 C4 A B1417 97.423 154.897 56.171 1.00 43.71 C
ATOM 24 P A B1418 101.601 150.266 54.021 1.00 52.50 P
ATOM 25 OP1 A B1418 102.881 149.545 53.738 1.00 49.99 O
ATOM 26 OP2 A B1418 100.607 150.475 52.914 1.00 49.24 O
ATOM 27 O5' A B1418 100.867 149.518 55.223 1.00 48.25 O
TER
Atoms:
OP1: (104.215,150.131,62.557)
OP2: (102.525,150.208,64.481)
C3': (100.887,153.093,60.628)
C1': (98.663,152.316,60.563)
C5': (101.886,150.713,60.721)
O4': (99.535,151.206,60.373)
C8: (98.629,151.519,62.969)
O2': (99.338,153.862,58.907)
C6: (95.698,152.817,64.400)
C5: (96.825,152.374,63.690)
C4: (96.946,152.788,62.377)
P: (102.835,149.924,63.059)
C4': (100.884,151.669,60.105)
C2': (99.480,153.572,60.282)
C2: (95.067,153.929,62.481)
N1: (94.820,153.611,63.752)
N3: (96.090,153.574,61.704)
N6: (95.454,152.497,65.674)
N7: (97.896,151.570,64.051)
N9: (98.108,152.223,61.912)
O5': (101.790,150.729,62.159)
O3': (101.917,153.884,60.043)
OP2: (102.525,150.208,64.481)
C3': (100.887,153.093,60.628)
C1': (98.663,152.316,60.563)
C5': (101.886,150.713,60.721)
O4': (99.535,151.206,60.373)
C8: (98.629,151.519,62.969)
O2': (99.338,153.862,58.907)
C6: (95.698,152.817,64.400)
C5: (96.825,152.374,63.690)
C4: (96.946,152.788,62.377)
P: (102.835,149.924,63.059)
C4': (100.884,151.669,60.105)
C2': (99.480,153.572,60.282)
C2: (95.067,153.929,62.481)
N1: (94.820,153.611,63.752)
N3: (96.090,153.574,61.704)
N6: (95.454,152.497,65.674)
N7: (97.896,151.570,64.051)
N9: (98.108,152.223,61.912)
O5': (101.790,150.729,62.159)
O3': (101.917,153.884,60.043)
OP1: (102.749,152.651,50.477)
OP2: (100.325,153.054,49.709)
C3': (100.994,152.764,54.524)
C1': (99.865,154.510,55.647)
C5': (102.152,154.336,52.832)
O4': (100.702,155.074,54.648)
C8: (97.934,154.965,54.042)
O2': (101.143,152.992,56.959)
C6: (95.136,155.536,56.096)
C5: (96.330,155.259,55.408)
C4: (97.423,154.897,56.171)
P: (101.548,153.532,50.399)
C4': (101.682,154.088,54.246)
C2': (100.279,153.050,55.841)
C2: (96.272,155.041,58.040)
N1: (95.141,155.411,57.439)
N3: (97.459,154.762,57.505)
N6: (94.009,155.924,55.499)
N7: (96.663,155.289,54.061)
N9: (98.468,154.756,55.288)
O5': (101.144,153.959,51.881)
O3': (101.938,151.709,54.642)
OP2: (100.325,153.054,49.709)
C3': (100.994,152.764,54.524)
C1': (99.865,154.510,55.647)
C5': (102.152,154.336,52.832)
O4': (100.702,155.074,54.648)
C8: (97.934,154.965,54.042)
O2': (101.143,152.992,56.959)
C6: (95.136,155.536,56.096)
C5: (96.330,155.259,55.408)
C4: (97.423,154.897,56.171)
P: (101.548,153.532,50.399)
C4': (101.682,154.088,54.246)
C2': (100.279,153.050,55.841)
C2: (96.272,155.041,58.040)
N1: (95.141,155.411,57.439)
N3: (97.459,154.762,57.505)
N6: (94.009,155.924,55.499)
N7: (96.663,155.289,54.061)
N9: (98.468,154.756,55.288)
O5': (101.144,153.959,51.881)
O3': (101.938,151.709,54.642)
Image (generated by PyMOL):