ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01867:02112

Extra

PDB:
ATOM 1 O3' G A1866 106.152 91.405 57.013 1.00 52.45 O
ATOM 2 P A A1867 105.908 90.308 55.866 1.00 52.49 P
ATOM 3 OP1 A A1867 104.996 89.295 56.467 1.00 50.36 O
ATOM 4 OP2 A A1867 107.227 89.882 55.324 1.00 52.58 O
ATOM 5 O5' A A1867 105.127 91.099 54.719 1.00 50.91 O
ATOM 6 C5' A A1867 103.724 91.389 54.858 1.00 50.18 C
ATOM 7 C4' A A1867 103.330 92.569 54.004 1.00 49.05 C
ATOM 8 O4' A A1867 104.146 93.716 54.342 1.00 50.55 O
ATOM 9 C3' A A1867 103.520 92.427 52.508 1.00 49.50 C
ATOM 10 O3' A A1867 102.432 91.724 51.931 1.00 49.28 O
ATOM 11 C2' A A1867 103.532 93.880 52.060 1.00 50.57 C
ATOM 12 O2' A A1867 102.237 94.443 52.042 1.00 52.23 O
ATOM 13 C1' A A1867 104.308 94.535 53.199 1.00 50.09 C
ATOM 14 N9 A A1867 105.736 94.684 52.924 1.00 50.14 N
ATOM 15 C8 A A1867 106.764 93.830 53.234 1.00 50.45 C
ATOM 16 N7 A A1867 107.945 94.276 52.879 1.00 50.87 N
ATOM 17 C5 A A1867 107.673 95.501 52.289 1.00 51.23 C
ATOM 18 C6 A A1867 108.503 96.479 51.715 1.00 52.88 C
ATOM 19 N6 A A1867 109.832 96.371 51.634 1.00 54.63 N
ATOM 20 N1 A A1867 107.915 97.590 51.219 1.00 53.43 N
ATOM 21 C2 A A1867 106.583 97.698 51.300 1.00 53.18 C
ATOM 22 N3 A A1867 105.699 96.848 51.816 1.00 51.60 N
ATOM 23 C4 A A1867 106.317 95.759 52.301 1.00 50.54 C
ATOM 24 P A A1868 102.655 90.872 50.591 1.00 49.42 P
ATOM 25 OP1 A A1868 101.459 90.008 50.435 1.00 48.27 O
ATOM 26 OP2 A A1868 104.010 90.262 50.638 1.00 50.07 O
ATOM 27 O5' A A1868 102.646 91.957 49.431 1.00 47.05 O
TER

ATOM 1 O3' U B2111 97.816 99.998 47.581 1.00 41.34 O
ATOM 2 P A B2112 97.449 99.930 49.145 1.00 42.78 P
ATOM 3 OP1 A B2112 96.307 98.986 49.238 1.00 42.84 O
ATOM 4 OP2 A B2112 97.311 101.312 49.687 1.00 41.01 O
ATOM 5 O5' A B2112 98.722 99.250 49.818 1.00 39.70 O
ATOM 6 C5' A B2112 99.077 97.894 49.508 1.00 40.89 C
ATOM 7 C4' A B2112 100.472 97.600 49.987 1.00 42.17 C
ATOM 8 O4' A B2112 101.401 98.483 49.307 1.00 43.54 O
ATOM 9 C3' A B2112 100.720 97.887 51.456 1.00 43.17 C
ATOM 10 O3' A B2112 100.266 96.834 52.285 1.00 42.95 O
ATOM 11 C2' A B2112 102.229 98.076 51.488 1.00 43.34 C
ATOM 12 O2' A B2112 102.950 96.864 51.397 1.00 43.52 O
ATOM 13 C1' A B2112 102.442 98.862 50.197 1.00 42.22 C
ATOM 14 N9 A B2112 102.359 100.306 50.423 1.00 41.19 N
ATOM 15 C8 A B2112 101.311 101.157 50.176 1.00 40.50 C
ATOM 16 N7 A B2112 101.553 102.402 50.501 1.00 40.09 N
ATOM 17 C5 A B2112 102.848 102.370 50.994 1.00 40.91 C
ATOM 18 C6 A B2112 103.688 103.368 51.503 1.00 41.34 C
ATOM 19 N6 A B2112 103.339 104.650 51.606 1.00 42.76 N
ATOM 20 N1 A B2112 104.919 103.001 51.911 1.00 42.01 N
ATOM 21 C2 A B2112 105.274 101.714 51.809 1.00 41.62 C
ATOM 22 N3 A B2112 104.577 100.687 51.348 1.00 41.58 N
ATOM 23 C4 A B2112 103.356 101.086 50.951 1.00 41.60 C
ATOM 24 P G B2113 99.545 97.177 53.676 1.00 43.51 P
ATOM 25 OP1 G B2113 98.652 96.027 53.987 1.00 43.91 O
ATOM 26 OP2 G B2113 98.976 98.540 53.600 1.00 44.34 O
ATOM 27 O5' G B2113 100.742 97.215 54.725 1.00 43.74 O
TER

Atoms:
OP1: (104.996,89.295,56.467)
OP2: (107.227,89.882,55.324)
C3': (103.520,92.427,52.508)
C1': (104.308,94.535,53.199)
C5': (103.724,91.389,54.858)
O4': (104.146,93.716,54.342)
C8: (106.764,93.830,53.234)
O2': (102.237,94.443,52.042)
C6: (108.503,96.479,51.715)
C5: (107.673,95.501,52.289)
C4: (106.317,95.759,52.301)
P: (105.908,90.308,55.866)
C4': (103.330,92.569,54.004)
C2': (103.532,93.880,52.060)
C2: (106.583,97.698,51.300)
N1: (107.915,97.590,51.219)
N3: (105.699,96.848,51.816)
N6: (109.832,96.371,51.634)
N7: (107.945,94.276,52.879)
N9: (105.736,94.684,52.924)
O5': (105.127,91.099,54.719)
O3': (102.432,91.724,51.931)
OP1: (96.307,98.986,49.238)
OP2: (97.311,101.312,49.687)
C3': (100.720,97.887,51.456)
C1': (102.442,98.862,50.197)
C5': (99.077,97.894,49.508)
O4': (101.401,98.483,49.307)
C8: (101.311,101.157,50.176)
O2': (102.950,96.864,51.397)
C6: (103.688,103.368,51.503)
C5: (102.848,102.370,50.994)
C4: (103.356,101.086,50.951)
P: (97.449,99.930,49.145)
C4': (100.472,97.600,49.987)
C2': (102.229,98.076,51.488)
C2: (105.274,101.714,51.809)
N1: (104.919,103.001,51.911)
N3: (104.577,100.687,51.348)
N6: (103.339,104.650,51.606)
N7: (101.553,102.402,50.501)
N9: (102.359,100.306,50.423)
O5': (98.722,99.250,49.818)
O3': (100.266,96.834,52.285)
Image (generated by PyMOL):
PyMOL image
show in jmol