ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A881:A1390

Extra

PDB:
ATOM 1 O3' A A 880 -23.062 80.813 100.724 1.00 37.71 O
ATOM 2 P A A 881 -24.421 80.279 100.062 1.00 43.87 P
ATOM 3 OP1 A A 881 -24.179 78.831 99.841 1.00 41.51 O
ATOM 4 OP2 A A 881 -24.825 81.136 98.925 1.00 38.04 O
ATOM 5 O5' A A 881 -25.503 80.481 101.211 1.00 23.47 O
ATOM 6 C5' A A 881 -25.304 79.883 102.500 1.00 21.70 C
ATOM 7 C4' A A 881 -26.302 80.416 103.496 1.00 20.89 C
ATOM 8 O4' A A 881 -26.030 81.801 103.818 1.00 20.00 O
ATOM 9 C3' A A 881 -27.753 80.395 103.060 1.00 21.44 C
ATOM 10 O3' A A 881 -28.313 79.118 103.303 1.00 22.11 O
ATOM 11 C2' A A 881 -28.385 81.454 103.957 1.00 20.74 C
ATOM 12 O2' A A 881 -28.737 80.948 105.231 1.00 21.89 O
ATOM 13 C1' A A 881 -27.250 82.473 104.094 1.00 18.96 C
ATOM 14 N9 A A 881 -27.393 83.584 103.152 1.00 12.69 N
ATOM 15 C8 A A 881 -26.711 83.780 101.973 1.00 12.69 C
ATOM 16 N7 A A 881 -27.070 84.858 101.327 1.00 12.69 N
ATOM 17 C5 A A 881 -28.047 85.411 102.130 1.00 12.69 C
ATOM 18 C6 A A 881 -28.805 86.557 101.994 1.00 12.69 C
ATOM 19 N6 A A 881 -28.686 87.380 100.950 1.00 12.69 N
ATOM 20 N1 A A 881 -29.699 86.845 102.971 1.00 12.69 N
ATOM 21 C2 A A 881 -29.797 86.009 104.012 1.00 12.69 C
ATOM 22 N3 A A 881 -29.124 84.888 104.251 1.00 12.69 N
ATOM 23 C4 A A 881 -28.255 84.644 103.259 1.00 12.69 C
ATOM 24 P C A 882 -29.502 78.582 102.382 1.00 26.63 P
ATOM 25 OP1 C A 882 -30.143 77.514 103.180 1.00 9.34 O
ATOM 26 OP2 C A 882 -28.999 78.309 100.996 1.00 10.85 O
ATOM 27 O5' C A 882 -30.542 79.770 102.341 1.00 21.57 O
TER

ATOM 1 O3' C B1389 -35.577 80.645 109.516 1.00 19.44 O
ATOM 2 P A B1390 -34.532 80.841 110.711 1.00 27.30 P
ATOM 3 OP1 A B1390 -34.143 79.472 111.091 1.00 25.86 O
ATOM 4 OP2 A B1390 -35.120 81.746 111.737 1.00 25.70 O
ATOM 5 O5' A B1390 -33.266 81.520 110.018 1.00 3.35 O
ATOM 6 C5' A B1390 -32.409 80.726 109.176 1.00 2.72 C
ATOM 7 C4' A B1390 -31.723 81.569 108.122 1.00 2.72 C
ATOM 8 O4' A B1390 -32.670 82.467 107.480 1.00 2.72 O
ATOM 9 C3' A B1390 -30.626 82.483 108.607 1.00 2.72 C
ATOM 10 O3' A B1390 -29.409 81.789 108.761 1.00 2.72 O
ATOM 11 C2' A B1390 -30.550 83.530 107.503 1.00 2.72 C
ATOM 12 O2' A B1390 -29.800 83.099 106.389 1.00 2.72 O
ATOM 13 C1' A B1390 -32.018 83.669 107.109 1.00 2.72 C
ATOM 14 N9 A B1390 -32.646 84.782 107.821 1.00 17.56 N
ATOM 15 C8 A B1390 -33.568 84.760 108.839 1.00 17.56 C
ATOM 16 N7 A B1390 -33.902 85.947 109.272 1.00 17.56 N
ATOM 17 C5 A B1390 -33.153 86.805 108.487 1.00 17.56 C
ATOM 18 C6 A B1390 -33.048 88.186 108.462 1.00 17.56 C
ATOM 19 N6 A B1390 -33.725 88.977 109.277 1.00 17.56 N
ATOM 20 N1 A B1390 -32.210 88.743 107.563 1.00 17.56 N
ATOM 21 C2 A B1390 -31.526 87.938 106.743 1.00 17.56 C
ATOM 22 N3 A B1390 -31.540 86.614 106.672 1.00 17.56 N
ATOM 23 C4 A B1390 -32.384 86.104 107.586 1.00 17.56 C
ATOM 24 P U B1391 -28.429 82.205 109.956 1.00 40.37 P
ATOM 25 OP1 U B1391 -27.192 81.355 109.909 1.00 10.73 O
ATOM 26 OP2 U B1391 -29.299 82.223 111.171 1.00 10.73 O
ATOM 27 O5' U B1391 -27.980 83.684 109.599 1.00 28.57 O
TER

Atoms:
OP1: (-24.179,78.831,99.841)
OP2: (-24.825,81.136,98.925)
C3': (-27.753,80.395,103.060)
C1': (-27.250,82.473,104.094)
C5': (-25.304,79.883,102.500)
O4': (-26.030,81.801,103.818)
C8: (-26.711,83.780,101.973)
O2': (-28.737,80.948,105.231)
C6: (-28.805,86.557,101.994)
C5: (-28.047,85.411,102.130)
C4: (-28.255,84.644,103.259)
P: (-24.421,80.279,100.062)
C4': (-26.302,80.416,103.496)
C2': (-28.385,81.454,103.957)
C2: (-29.797,86.009,104.012)
N1: (-29.699,86.845,102.971)
N3: (-29.124,84.888,104.251)
N6: (-28.686,87.380,100.950)
N7: (-27.070,84.858,101.327)
N9: (-27.393,83.584,103.152)
O5': (-25.503,80.481,101.211)
O3': (-28.313,79.118,103.303)
OP1: (-34.143,79.472,111.091)
OP2: (-35.120,81.746,111.737)
C3': (-30.626,82.483,108.607)
C1': (-32.018,83.669,107.109)
C5': (-32.409,80.726,109.176)
O4': (-32.670,82.467,107.480)
C8: (-33.568,84.760,108.839)
O2': (-29.800,83.099,106.389)
C6: (-33.048,88.186,108.462)
C5: (-33.153,86.805,108.487)
C4: (-32.384,86.104,107.586)
P: (-34.532,80.841,110.711)
C4': (-31.723,81.569,108.122)
C2': (-30.550,83.530,107.503)
C2: (-31.526,87.938,106.743)
N1: (-32.210,88.743,107.563)
N3: (-31.540,86.614,106.672)
N6: (-33.725,88.977,109.277)
N7: (-33.902,85.947,109.272)
N9: (-32.646,84.782,107.821)
O5': (-33.266,81.520,110.018)
O3': (-29.409,81.789,108.761)
Image (generated by PyMOL):
PyMOL image
show in jmol