Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1993:A2311
Extra
PDB:
ATOM 1 O3' U A1992 -88.673 -26.651 35.198 1.00 20.83 O
ATOM 2 P A A1993 -88.059 -28.043 34.702 1.00 12.98 P
ATOM 3 OP1 A A1993 -86.711 -28.112 35.304 1.00 12.98 O
ATOM 4 OP2 A A1993 -88.213 -28.175 33.236 1.00 12.98 O
ATOM 5 O5' A A1993 -88.978 -29.135 35.401 1.00 12.75 O
ATOM 6 C5' A A1993 -90.370 -29.203 35.105 1.00 12.75 C
ATOM 7 C4' A A1993 -90.935 -30.505 35.598 1.00 12.75 C
ATOM 8 O4' A A1993 -90.443 -31.597 34.777 1.00 12.75 O
ATOM 9 C3' A A1993 -90.525 -30.846 37.018 1.00 12.75 C
ATOM 10 O3' A A1993 -91.415 -30.210 37.940 1.00 12.75 O
ATOM 11 C2' A A1993 -90.606 -32.370 37.024 1.00 12.75 C
ATOM 12 O2' A A1993 -91.927 -32.823 37.238 1.00 12.75 O
ATOM 13 C1' A A1993 -90.174 -32.722 35.591 1.00 12.75 C
ATOM 14 N9 A A1993 -88.747 -33.006 35.486 1.00 2.58 N
ATOM 15 C8 A A1993 -87.783 -32.252 34.871 1.00 2.58 C
ATOM 16 N7 A A1993 -86.569 -32.718 35.016 1.00 2.58 N
ATOM 17 C5 A A1993 -86.748 -33.861 35.764 1.00 2.58 C
ATOM 18 C6 A A1993 -85.846 -34.794 36.265 1.00 2.58 C
ATOM 19 N6 A A1993 -84.534 -34.699 36.109 1.00 2.58 N
ATOM 20 N1 A A1993 -86.340 -35.843 36.951 1.00 2.58 N
ATOM 21 C2 A A1993 -87.671 -35.919 37.126 1.00 2.58 C
ATOM 22 N3 A A1993 -88.630 -35.082 36.713 1.00 2.58 N
ATOM 23 C4 A A1993 -88.090 -34.067 36.033 1.00 2.58 C
ATOM 24 P C A1994 -90.833 -29.532 39.280 1.00 7.06 P
ATOM 25 OP1 C A1994 -91.941 -28.723 39.848 1.00 7.06 O
ATOM 26 OP2 C A1994 -89.519 -28.890 39.008 1.00 7.06 O
ATOM 27 O5' C A1994 -90.611 -30.796 40.232 1.00 12.52 O
TER
ATOM 1 O3' A B2310 -95.432 -35.474 43.259 1.00 29.86 O
ATOM 2 P A B2311 -96.038 -36.511 42.201 1.00 40.89 P
ATOM 3 OP1 A B2311 -97.439 -36.101 41.941 1.00 35.89 O
ATOM 4 OP2 A B2311 -95.753 -37.878 42.705 1.00 35.89 O
ATOM 5 O5' A B2311 -95.169 -36.298 40.877 1.00 15.57 O
ATOM 6 C5' A B2311 -94.761 -34.982 40.451 1.00 15.57 C
ATOM 7 C4' A B2311 -93.557 -35.072 39.537 1.00 15.57 C
ATOM 8 O4' A B2311 -92.422 -35.635 40.246 1.00 15.57 O
ATOM 9 C3' A B2311 -93.732 -35.931 38.298 1.00 15.57 C
ATOM 10 O3' A B2311 -94.297 -35.114 37.282 1.00 15.57 O
ATOM 11 C2' A B2311 -92.299 -36.362 37.971 1.00 15.57 C
ATOM 12 O2' A B2311 -91.576 -35.412 37.211 1.00 15.57 O
ATOM 13 C1' A B2311 -91.654 -36.440 39.361 1.00 15.57 C
ATOM 14 N9 A B2311 -91.541 -37.778 39.956 1.00 0.79 N
ATOM 15 C8 A B2311 -92.548 -38.682 40.186 1.00 0.79 C
ATOM 16 N7 A B2311 -92.161 -39.754 40.835 1.00 0.79 N
ATOM 17 C5 A B2311 -90.811 -39.547 41.030 1.00 0.79 C
ATOM 18 C6 A B2311 -89.852 -40.294 41.688 1.00 0.79 C
ATOM 19 N6 A B2311 -90.124 -41.430 42.329 1.00 0.79 N
ATOM 20 N1 A B2311 -88.590 -39.832 41.692 1.00 0.79 N
ATOM 21 C2 A B2311 -88.335 -38.670 41.088 1.00 0.79 C
ATOM 22 N3 A B2311 -89.164 -37.855 40.456 1.00 0.79 N
ATOM 23 C4 A B2311 -90.405 -38.357 40.463 1.00 0.79 C
ATOM 24 P A B2312 -95.237 -35.754 36.149 1.00 17.94 P
ATOM 25 OP1 A B2312 -96.610 -35.215 36.278 1.00 8.94 O
ATOM 26 OP2 A B2312 -95.037 -37.213 36.131 1.00 8.94 O
ATOM 27 O5' A B2312 -94.645 -35.123 34.826 1.00 1.74 O
TER
ATOM 2 P A A1993 -88.059 -28.043 34.702 1.00 12.98 P
ATOM 3 OP1 A A1993 -86.711 -28.112 35.304 1.00 12.98 O
ATOM 4 OP2 A A1993 -88.213 -28.175 33.236 1.00 12.98 O
ATOM 5 O5' A A1993 -88.978 -29.135 35.401 1.00 12.75 O
ATOM 6 C5' A A1993 -90.370 -29.203 35.105 1.00 12.75 C
ATOM 7 C4' A A1993 -90.935 -30.505 35.598 1.00 12.75 C
ATOM 8 O4' A A1993 -90.443 -31.597 34.777 1.00 12.75 O
ATOM 9 C3' A A1993 -90.525 -30.846 37.018 1.00 12.75 C
ATOM 10 O3' A A1993 -91.415 -30.210 37.940 1.00 12.75 O
ATOM 11 C2' A A1993 -90.606 -32.370 37.024 1.00 12.75 C
ATOM 12 O2' A A1993 -91.927 -32.823 37.238 1.00 12.75 O
ATOM 13 C1' A A1993 -90.174 -32.722 35.591 1.00 12.75 C
ATOM 14 N9 A A1993 -88.747 -33.006 35.486 1.00 2.58 N
ATOM 15 C8 A A1993 -87.783 -32.252 34.871 1.00 2.58 C
ATOM 16 N7 A A1993 -86.569 -32.718 35.016 1.00 2.58 N
ATOM 17 C5 A A1993 -86.748 -33.861 35.764 1.00 2.58 C
ATOM 18 C6 A A1993 -85.846 -34.794 36.265 1.00 2.58 C
ATOM 19 N6 A A1993 -84.534 -34.699 36.109 1.00 2.58 N
ATOM 20 N1 A A1993 -86.340 -35.843 36.951 1.00 2.58 N
ATOM 21 C2 A A1993 -87.671 -35.919 37.126 1.00 2.58 C
ATOM 22 N3 A A1993 -88.630 -35.082 36.713 1.00 2.58 N
ATOM 23 C4 A A1993 -88.090 -34.067 36.033 1.00 2.58 C
ATOM 24 P C A1994 -90.833 -29.532 39.280 1.00 7.06 P
ATOM 25 OP1 C A1994 -91.941 -28.723 39.848 1.00 7.06 O
ATOM 26 OP2 C A1994 -89.519 -28.890 39.008 1.00 7.06 O
ATOM 27 O5' C A1994 -90.611 -30.796 40.232 1.00 12.52 O
TER
ATOM 1 O3' A B2310 -95.432 -35.474 43.259 1.00 29.86 O
ATOM 2 P A B2311 -96.038 -36.511 42.201 1.00 40.89 P
ATOM 3 OP1 A B2311 -97.439 -36.101 41.941 1.00 35.89 O
ATOM 4 OP2 A B2311 -95.753 -37.878 42.705 1.00 35.89 O
ATOM 5 O5' A B2311 -95.169 -36.298 40.877 1.00 15.57 O
ATOM 6 C5' A B2311 -94.761 -34.982 40.451 1.00 15.57 C
ATOM 7 C4' A B2311 -93.557 -35.072 39.537 1.00 15.57 C
ATOM 8 O4' A B2311 -92.422 -35.635 40.246 1.00 15.57 O
ATOM 9 C3' A B2311 -93.732 -35.931 38.298 1.00 15.57 C
ATOM 10 O3' A B2311 -94.297 -35.114 37.282 1.00 15.57 O
ATOM 11 C2' A B2311 -92.299 -36.362 37.971 1.00 15.57 C
ATOM 12 O2' A B2311 -91.576 -35.412 37.211 1.00 15.57 O
ATOM 13 C1' A B2311 -91.654 -36.440 39.361 1.00 15.57 C
ATOM 14 N9 A B2311 -91.541 -37.778 39.956 1.00 0.79 N
ATOM 15 C8 A B2311 -92.548 -38.682 40.186 1.00 0.79 C
ATOM 16 N7 A B2311 -92.161 -39.754 40.835 1.00 0.79 N
ATOM 17 C5 A B2311 -90.811 -39.547 41.030 1.00 0.79 C
ATOM 18 C6 A B2311 -89.852 -40.294 41.688 1.00 0.79 C
ATOM 19 N6 A B2311 -90.124 -41.430 42.329 1.00 0.79 N
ATOM 20 N1 A B2311 -88.590 -39.832 41.692 1.00 0.79 N
ATOM 21 C2 A B2311 -88.335 -38.670 41.088 1.00 0.79 C
ATOM 22 N3 A B2311 -89.164 -37.855 40.456 1.00 0.79 N
ATOM 23 C4 A B2311 -90.405 -38.357 40.463 1.00 0.79 C
ATOM 24 P A B2312 -95.237 -35.754 36.149 1.00 17.94 P
ATOM 25 OP1 A B2312 -96.610 -35.215 36.278 1.00 8.94 O
ATOM 26 OP2 A B2312 -95.037 -37.213 36.131 1.00 8.94 O
ATOM 27 O5' A B2312 -94.645 -35.123 34.826 1.00 1.74 O
TER
Atoms:
OP1: (-86.711,-28.112,35.304)
OP2: (-88.213,-28.175,33.236)
C3': (-90.525,-30.846,37.018)
C1': (-90.174,-32.722,35.591)
C5': (-90.370,-29.203,35.105)
O4': (-90.443,-31.597,34.777)
C8: (-87.783,-32.252,34.871)
O2': (-91.927,-32.823,37.238)
C6: (-85.846,-34.794,36.265)
C5: (-86.748,-33.861,35.764)
C4: (-88.090,-34.067,36.033)
P: (-88.059,-28.043,34.702)
C4': (-90.935,-30.505,35.598)
C2': (-90.606,-32.370,37.024)
C2: (-87.671,-35.919,37.126)
N1: (-86.340,-35.843,36.951)
N3: (-88.630,-35.082,36.713)
N6: (-84.534,-34.699,36.109)
N7: (-86.569,-32.718,35.016)
N9: (-88.747,-33.006,35.486)
O5': (-88.978,-29.135,35.401)
O3': (-91.415,-30.210,37.940)
OP2: (-88.213,-28.175,33.236)
C3': (-90.525,-30.846,37.018)
C1': (-90.174,-32.722,35.591)
C5': (-90.370,-29.203,35.105)
O4': (-90.443,-31.597,34.777)
C8: (-87.783,-32.252,34.871)
O2': (-91.927,-32.823,37.238)
C6: (-85.846,-34.794,36.265)
C5: (-86.748,-33.861,35.764)
C4: (-88.090,-34.067,36.033)
P: (-88.059,-28.043,34.702)
C4': (-90.935,-30.505,35.598)
C2': (-90.606,-32.370,37.024)
C2: (-87.671,-35.919,37.126)
N1: (-86.340,-35.843,36.951)
N3: (-88.630,-35.082,36.713)
N6: (-84.534,-34.699,36.109)
N7: (-86.569,-32.718,35.016)
N9: (-88.747,-33.006,35.486)
O5': (-88.978,-29.135,35.401)
O3': (-91.415,-30.210,37.940)
OP1: (-97.439,-36.101,41.941)
OP2: (-95.753,-37.878,42.705)
C3': (-93.732,-35.931,38.298)
C1': (-91.654,-36.440,39.361)
C5': (-94.761,-34.982,40.451)
O4': (-92.422,-35.635,40.246)
C8: (-92.548,-38.682,40.186)
O2': (-91.576,-35.412,37.211)
C6: (-89.852,-40.294,41.688)
C5: (-90.811,-39.547,41.030)
C4: (-90.405,-38.357,40.463)
P: (-96.038,-36.511,42.201)
C4': (-93.557,-35.072,39.537)
C2': (-92.299,-36.362,37.971)
C2: (-88.335,-38.670,41.088)
N1: (-88.590,-39.832,41.692)
N3: (-89.164,-37.855,40.456)
N6: (-90.124,-41.430,42.329)
N7: (-92.161,-39.754,40.835)
N9: (-91.541,-37.778,39.956)
O5': (-95.169,-36.298,40.877)
O3': (-94.297,-35.114,37.282)
OP2: (-95.753,-37.878,42.705)
C3': (-93.732,-35.931,38.298)
C1': (-91.654,-36.440,39.361)
C5': (-94.761,-34.982,40.451)
O4': (-92.422,-35.635,40.246)
C8: (-92.548,-38.682,40.186)
O2': (-91.576,-35.412,37.211)
C6: (-89.852,-40.294,41.688)
C5: (-90.811,-39.547,41.030)
C4: (-90.405,-38.357,40.463)
P: (-96.038,-36.511,42.201)
C4': (-93.557,-35.072,39.537)
C2': (-92.299,-36.362,37.971)
C2: (-88.335,-38.670,41.088)
N1: (-88.590,-39.832,41.692)
N3: (-89.164,-37.855,40.456)
N6: (-90.124,-41.430,42.329)
N7: (-92.161,-39.754,40.835)
N9: (-91.541,-37.778,39.956)
O5': (-95.169,-36.298,40.877)
O3': (-94.297,-35.114,37.282)
Image (generated by PyMOL):