Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0222:0424
Extra
PDB:
ATOM 1 O3' U A 221 49.732 107.179 20.657 1.00 46.59 O
ATOM 2 P A A 222 49.557 107.320 19.076 1.00 46.15 P
ATOM 3 OP1 A A 222 48.607 108.447 18.883 1.00 44.87 O
ATOM 4 OP2 A A 222 49.255 105.991 18.500 1.00 46.07 O
ATOM 5 O5' A A 222 51.010 107.745 18.577 1.00 45.45 O
ATOM 6 C5' A A 222 51.552 109.027 18.935 1.00 45.76 C
ATOM 7 C4' A A 222 53.036 109.054 18.697 1.00 45.50 C
ATOM 8 O4' A A 222 53.663 108.008 19.477 1.00 45.34 O
ATOM 9 C3' A A 222 53.468 108.741 17.282 1.00 45.71 C
ATOM 10 O3' A A 222 53.343 109.875 16.443 1.00 48.91 O
ATOM 11 C2' A A 222 54.910 108.290 17.475 1.00 44.33 C
ATOM 12 O2' A A 222 55.825 109.351 17.654 1.00 43.56 O
ATOM 13 C1' A A 222 54.791 107.505 18.780 1.00 44.03 C
ATOM 14 N9 A A 222 54.573 106.087 18.543 1.00 42.43 N
ATOM 15 C8 A A 222 53.375 105.423 18.455 1.00 42.72 C
ATOM 16 N7 A A 222 53.502 104.137 18.229 1.00 42.08 N
ATOM 17 C5 A A 222 54.875 103.945 18.168 1.00 40.85 C
ATOM 18 C6 A A 222 55.652 102.806 17.954 1.00 39.93 C
ATOM 19 N6 A A 222 55.136 101.597 17.751 1.00 39.76 N
ATOM 20 N1 A A 222 56.999 102.951 17.952 1.00 39.93 N
ATOM 21 C2 A A 222 57.510 104.174 18.147 1.00 40.31 C
ATOM 22 N3 A A 222 56.877 105.324 18.357 1.00 40.32 N
ATOM 23 C4 A A 222 55.546 105.137 18.358 1.00 41.31 C
ATOM 24 P C A 223 53.516 109.705 14.858 1.00 51.38 P
ATOM 25 OP1 C A 223 53.139 111.008 14.239 1.00 51.43 O
ATOM 26 OP2 C A 223 52.826 108.455 14.422 1.00 50.85 O
ATOM 27 O5' C A 223 55.084 109.479 14.697 1.00 50.41 O
TER
ATOM 1 O3' A B 423 60.693 117.047 16.411 1.00 47.24 O
ATOM 2 P A B 424 59.763 116.869 17.701 1.00 48.12 P
ATOM 3 OP1 A B 424 58.872 118.056 17.807 1.00 48.64 O
ATOM 4 OP2 A B 424 60.651 116.511 18.834 1.00 48.78 O
ATOM 5 O5' A B 424 58.885 115.594 17.348 1.00 48.19 O
ATOM 6 C5' A B 424 57.685 115.702 16.584 1.00 47.40 C
ATOM 7 C4' A B 424 56.869 114.465 16.788 1.00 47.07 C
ATOM 8 O4' A B 424 57.602 113.337 16.261 1.00 46.72 O
ATOM 9 C3' A B 424 56.666 114.136 18.253 1.00 47.56 C
ATOM 10 O3' A B 424 55.530 114.834 18.736 1.00 49.27 O
ATOM 11 C2' A B 424 56.485 112.625 18.238 1.00 46.36 C
ATOM 12 O2' A B 424 55.179 112.251 17.859 1.00 45.93 O
ATOM 13 C1' A B 424 57.439 112.219 17.112 1.00 45.88 C
ATOM 14 N9 A B 424 58.772 111.767 17.503 1.00 44.72 N
ATOM 15 C8 A B 424 59.867 112.537 17.788 1.00 44.30 C
ATOM 16 N7 A B 424 60.957 111.843 18.010 1.00 44.54 N
ATOM 17 C5 A B 424 60.546 110.524 17.882 1.00 43.72 C
ATOM 18 C6 A B 424 61.236 109.298 17.983 1.00 43.00 C
ATOM 19 N6 A B 424 62.541 109.195 18.231 1.00 41.83 N
ATOM 20 N1 A B 424 60.528 108.164 17.812 1.00 43.36 N
ATOM 21 C2 A B 424 59.219 108.263 17.554 1.00 44.58 C
ATOM 22 N3 A B 424 58.461 109.354 17.425 1.00 44.81 N
ATOM 23 C4 A B 424 59.195 110.464 17.599 1.00 44.37 C
ATOM 24 P A B 425 55.364 115.090 20.308 1.00 51.41 P
ATOM 25 OP1 A B 425 54.157 115.933 20.482 1.00 50.87 O
ATOM 26 OP2 A B 425 56.661 115.530 20.884 1.00 50.96 O
ATOM 27 O5' A B 425 55.045 113.642 20.884 1.00 51.65 O
TER
ATOM 2 P A A 222 49.557 107.320 19.076 1.00 46.15 P
ATOM 3 OP1 A A 222 48.607 108.447 18.883 1.00 44.87 O
ATOM 4 OP2 A A 222 49.255 105.991 18.500 1.00 46.07 O
ATOM 5 O5' A A 222 51.010 107.745 18.577 1.00 45.45 O
ATOM 6 C5' A A 222 51.552 109.027 18.935 1.00 45.76 C
ATOM 7 C4' A A 222 53.036 109.054 18.697 1.00 45.50 C
ATOM 8 O4' A A 222 53.663 108.008 19.477 1.00 45.34 O
ATOM 9 C3' A A 222 53.468 108.741 17.282 1.00 45.71 C
ATOM 10 O3' A A 222 53.343 109.875 16.443 1.00 48.91 O
ATOM 11 C2' A A 222 54.910 108.290 17.475 1.00 44.33 C
ATOM 12 O2' A A 222 55.825 109.351 17.654 1.00 43.56 O
ATOM 13 C1' A A 222 54.791 107.505 18.780 1.00 44.03 C
ATOM 14 N9 A A 222 54.573 106.087 18.543 1.00 42.43 N
ATOM 15 C8 A A 222 53.375 105.423 18.455 1.00 42.72 C
ATOM 16 N7 A A 222 53.502 104.137 18.229 1.00 42.08 N
ATOM 17 C5 A A 222 54.875 103.945 18.168 1.00 40.85 C
ATOM 18 C6 A A 222 55.652 102.806 17.954 1.00 39.93 C
ATOM 19 N6 A A 222 55.136 101.597 17.751 1.00 39.76 N
ATOM 20 N1 A A 222 56.999 102.951 17.952 1.00 39.93 N
ATOM 21 C2 A A 222 57.510 104.174 18.147 1.00 40.31 C
ATOM 22 N3 A A 222 56.877 105.324 18.357 1.00 40.32 N
ATOM 23 C4 A A 222 55.546 105.137 18.358 1.00 41.31 C
ATOM 24 P C A 223 53.516 109.705 14.858 1.00 51.38 P
ATOM 25 OP1 C A 223 53.139 111.008 14.239 1.00 51.43 O
ATOM 26 OP2 C A 223 52.826 108.455 14.422 1.00 50.85 O
ATOM 27 O5' C A 223 55.084 109.479 14.697 1.00 50.41 O
TER
ATOM 1 O3' A B 423 60.693 117.047 16.411 1.00 47.24 O
ATOM 2 P A B 424 59.763 116.869 17.701 1.00 48.12 P
ATOM 3 OP1 A B 424 58.872 118.056 17.807 1.00 48.64 O
ATOM 4 OP2 A B 424 60.651 116.511 18.834 1.00 48.78 O
ATOM 5 O5' A B 424 58.885 115.594 17.348 1.00 48.19 O
ATOM 6 C5' A B 424 57.685 115.702 16.584 1.00 47.40 C
ATOM 7 C4' A B 424 56.869 114.465 16.788 1.00 47.07 C
ATOM 8 O4' A B 424 57.602 113.337 16.261 1.00 46.72 O
ATOM 9 C3' A B 424 56.666 114.136 18.253 1.00 47.56 C
ATOM 10 O3' A B 424 55.530 114.834 18.736 1.00 49.27 O
ATOM 11 C2' A B 424 56.485 112.625 18.238 1.00 46.36 C
ATOM 12 O2' A B 424 55.179 112.251 17.859 1.00 45.93 O
ATOM 13 C1' A B 424 57.439 112.219 17.112 1.00 45.88 C
ATOM 14 N9 A B 424 58.772 111.767 17.503 1.00 44.72 N
ATOM 15 C8 A B 424 59.867 112.537 17.788 1.00 44.30 C
ATOM 16 N7 A B 424 60.957 111.843 18.010 1.00 44.54 N
ATOM 17 C5 A B 424 60.546 110.524 17.882 1.00 43.72 C
ATOM 18 C6 A B 424 61.236 109.298 17.983 1.00 43.00 C
ATOM 19 N6 A B 424 62.541 109.195 18.231 1.00 41.83 N
ATOM 20 N1 A B 424 60.528 108.164 17.812 1.00 43.36 N
ATOM 21 C2 A B 424 59.219 108.263 17.554 1.00 44.58 C
ATOM 22 N3 A B 424 58.461 109.354 17.425 1.00 44.81 N
ATOM 23 C4 A B 424 59.195 110.464 17.599 1.00 44.37 C
ATOM 24 P A B 425 55.364 115.090 20.308 1.00 51.41 P
ATOM 25 OP1 A B 425 54.157 115.933 20.482 1.00 50.87 O
ATOM 26 OP2 A B 425 56.661 115.530 20.884 1.00 50.96 O
ATOM 27 O5' A B 425 55.045 113.642 20.884 1.00 51.65 O
TER
Atoms:
OP1: (48.607,108.447,18.883)
OP2: (49.255,105.991,18.500)
C3': (53.468,108.741,17.282)
C1': (54.791,107.505,18.780)
C5': (51.552,109.027,18.935)
O4': (53.663,108.008,19.477)
C8: (53.375,105.423,18.455)
O2': (55.825,109.351,17.654)
C6: (55.652,102.806,17.954)
C5: (54.875,103.945,18.168)
C4: (55.546,105.137,18.358)
P: (49.557,107.320,19.076)
C4': (53.036,109.054,18.697)
C2': (54.910,108.290,17.475)
C2: (57.510,104.174,18.147)
N1: (56.999,102.951,17.952)
N3: (56.877,105.324,18.357)
N6: (55.136,101.597,17.751)
N7: (53.502,104.137,18.229)
N9: (54.573,106.087,18.543)
O5': (51.010,107.745,18.577)
O3': (53.343,109.875,16.443)
OP2: (49.255,105.991,18.500)
C3': (53.468,108.741,17.282)
C1': (54.791,107.505,18.780)
C5': (51.552,109.027,18.935)
O4': (53.663,108.008,19.477)
C8: (53.375,105.423,18.455)
O2': (55.825,109.351,17.654)
C6: (55.652,102.806,17.954)
C5: (54.875,103.945,18.168)
C4: (55.546,105.137,18.358)
P: (49.557,107.320,19.076)
C4': (53.036,109.054,18.697)
C2': (54.910,108.290,17.475)
C2: (57.510,104.174,18.147)
N1: (56.999,102.951,17.952)
N3: (56.877,105.324,18.357)
N6: (55.136,101.597,17.751)
N7: (53.502,104.137,18.229)
N9: (54.573,106.087,18.543)
O5': (51.010,107.745,18.577)
O3': (53.343,109.875,16.443)
OP1: (58.872,118.056,17.807)
OP2: (60.651,116.511,18.834)
C3': (56.666,114.136,18.253)
C1': (57.439,112.219,17.112)
C5': (57.685,115.702,16.584)
O4': (57.602,113.337,16.261)
C8: (59.867,112.537,17.788)
O2': (55.179,112.251,17.859)
C6: (61.236,109.298,17.983)
C5: (60.546,110.524,17.882)
C4: (59.195,110.464,17.599)
P: (59.763,116.869,17.701)
C4': (56.869,114.465,16.788)
C2': (56.485,112.625,18.238)
C2: (59.219,108.263,17.554)
N1: (60.528,108.164,17.812)
N3: (58.461,109.354,17.425)
N6: (62.541,109.195,18.231)
N7: (60.957,111.843,18.010)
N9: (58.772,111.767,17.503)
O5': (58.885,115.594,17.348)
O3': (55.530,114.834,18.736)
OP2: (60.651,116.511,18.834)
C3': (56.666,114.136,18.253)
C1': (57.439,112.219,17.112)
C5': (57.685,115.702,16.584)
O4': (57.602,113.337,16.261)
C8: (59.867,112.537,17.788)
O2': (55.179,112.251,17.859)
C6: (61.236,109.298,17.983)
C5: (60.546,110.524,17.882)
C4: (59.195,110.464,17.599)
P: (59.763,116.869,17.701)
C4': (56.869,114.465,16.788)
C2': (56.485,112.625,18.238)
C2: (59.219,108.263,17.554)
N1: (60.528,108.164,17.812)
N3: (58.461,109.354,17.425)
N6: (62.541,109.195,18.231)
N7: (60.957,111.843,18.010)
N9: (58.772,111.767,17.503)
O5': (58.885,115.594,17.348)
O3': (55.530,114.834,18.736)
Image (generated by PyMOL):