Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CPW:0554:0580
Extra
PDB:
ATOM 1 O3' A A 553 -0.888 90.457 98.399 1.00 55.56 O
ATOM 2 P A A 554 -0.929 89.937 99.916 1.00 55.96 P
ATOM 3 OP1 A A 554 -1.088 88.459 99.861 1.00 53.09 O
ATOM 4 OP2 A A 554 -1.900 90.767 100.684 1.00 54.75 O
ATOM 5 O5' A A 554 0.519 90.285 100.481 1.00 55.39 O
ATOM 6 C5' A A 554 1.707 89.697 99.911 1.00 52.55 C
ATOM 7 C4' A A 554 2.920 90.489 100.326 1.00 50.70 C
ATOM 8 O4' A A 554 2.816 91.839 99.792 1.00 49.37 O
ATOM 9 C3' A A 554 3.069 90.696 101.824 1.00 50.83 C
ATOM 10 O3' A A 554 3.686 89.591 102.475 1.00 51.39 O
ATOM 11 C2' A A 554 3.901 91.967 101.902 1.00 48.87 C
ATOM 12 O2' A A 554 5.275 91.702 101.701 1.00 48.89 O
ATOM 13 C1' A A 554 3.359 92.765 100.716 1.00 48.18 C
ATOM 14 N9 A A 554 2.310 93.710 101.100 1.00 47.17 N
ATOM 15 C8 A A 554 0.972 93.459 101.272 1.00 48.62 C
ATOM 16 N7 A A 554 0.280 94.506 101.653 1.00 48.00 N
ATOM 17 C5 A A 554 1.223 95.519 101.727 1.00 48.18 C
ATOM 18 C6 A A 554 1.128 96.883 102.075 1.00 48.34 C
ATOM 19 N6 A A 554 -0.012 97.484 102.410 1.00 48.21 N
ATOM 20 N1 A A 554 2.261 97.616 102.057 1.00 46.28 N
ATOM 21 C2 A A 554 3.400 97.019 101.696 1.00 46.62 C
ATOM 22 N3 A A 554 3.617 95.754 101.339 1.00 47.26 N
ATOM 23 C4 A A 554 2.476 95.045 101.381 1.00 47.75 C
ATOM 24 P U A 555 3.107 89.086 103.891 1.00 51.36 P
ATOM 25 OP1 U A 555 4.049 88.066 104.404 1.00 47.20 O
ATOM 26 OP2 U A 555 1.671 88.735 103.708 1.00 50.57 O
ATOM 27 O5' U A 555 3.154 90.381 104.824 1.00 49.20 O
TER
ATOM 1 O3' A B 579 -6.393 102.666 106.345 1.00 61.71 O
ATOM 2 P G B 580 -6.384 103.014 104.776 1.00 61.97 P
ATOM 3 OP1 G B 580 -6.229 104.487 104.646 1.00 60.74 O
ATOM 4 OP2 G B 580 -7.547 102.340 104.139 1.00 62.09 O
ATOM 5 O5' G B 580 -5.090 102.267 104.220 1.00 60.07 O
ATOM 6 C5' G B 580 -3.763 102.577 104.700 1.00 55.78 C
ATOM 7 C4' G B 580 -2.766 101.628 104.081 1.00 55.35 C
ATOM 8 O4' G B 580 -3.000 100.288 104.586 1.00 54.93 O
ATOM 9 C3' G B 580 -2.876 101.506 102.565 1.00 54.68 C
ATOM 10 O3' G B 580 -2.057 102.460 101.910 1.00 55.30 O
ATOM 11 C2' G B 580 -2.362 100.097 102.289 1.00 53.98 C
ATOM 12 O2' G B 580 -0.960 100.032 102.137 1.00 55.61 O
ATOM 13 C1' G B 580 -2.807 99.340 103.544 1.00 53.77 C
ATOM 14 N9 G B 580 -4.075 98.661 103.316 1.00 52.66 N
ATOM 15 C8 G B 580 -5.330 99.141 103.614 1.00 54.73 C
ATOM 16 N7 G B 580 -6.286 98.341 103.239 1.00 54.42 N
ATOM 17 C5 G B 580 -5.625 97.262 102.673 1.00 52.99 C
ATOM 18 C6 G B 580 -6.139 96.099 102.092 1.00 52.46 C
ATOM 19 O6 G B 580 -7.318 95.781 101.951 1.00 55.85 O
ATOM 20 N1 G B 580 -5.128 95.258 101.644 1.00 50.87 N
ATOM 21 C2 G B 580 -3.785 95.517 101.747 1.00 51.35 C
ATOM 22 N2 G B 580 -2.958 94.579 101.265 1.00 51.65 N
ATOM 23 N3 G B 580 -3.288 96.615 102.286 1.00 51.87 N
ATOM 24 C4 G B 580 -4.259 97.439 102.726 1.00 52.28 C
ATOM 25 P A B 581 -2.644 103.906 101.534 1.00 58.66 P
ATOM 26 OP1 A B 581 -2.454 104.789 102.717 1.00 56.93 O
ATOM 27 OP2 A B 581 -3.997 103.771 100.940 1.00 58.01 O
ATOM 28 O5' A B 581 -1.650 104.393 100.388 1.00 58.66 O
TER
ATOM 2 P A A 554 -0.929 89.937 99.916 1.00 55.96 P
ATOM 3 OP1 A A 554 -1.088 88.459 99.861 1.00 53.09 O
ATOM 4 OP2 A A 554 -1.900 90.767 100.684 1.00 54.75 O
ATOM 5 O5' A A 554 0.519 90.285 100.481 1.00 55.39 O
ATOM 6 C5' A A 554 1.707 89.697 99.911 1.00 52.55 C
ATOM 7 C4' A A 554 2.920 90.489 100.326 1.00 50.70 C
ATOM 8 O4' A A 554 2.816 91.839 99.792 1.00 49.37 O
ATOM 9 C3' A A 554 3.069 90.696 101.824 1.00 50.83 C
ATOM 10 O3' A A 554 3.686 89.591 102.475 1.00 51.39 O
ATOM 11 C2' A A 554 3.901 91.967 101.902 1.00 48.87 C
ATOM 12 O2' A A 554 5.275 91.702 101.701 1.00 48.89 O
ATOM 13 C1' A A 554 3.359 92.765 100.716 1.00 48.18 C
ATOM 14 N9 A A 554 2.310 93.710 101.100 1.00 47.17 N
ATOM 15 C8 A A 554 0.972 93.459 101.272 1.00 48.62 C
ATOM 16 N7 A A 554 0.280 94.506 101.653 1.00 48.00 N
ATOM 17 C5 A A 554 1.223 95.519 101.727 1.00 48.18 C
ATOM 18 C6 A A 554 1.128 96.883 102.075 1.00 48.34 C
ATOM 19 N6 A A 554 -0.012 97.484 102.410 1.00 48.21 N
ATOM 20 N1 A A 554 2.261 97.616 102.057 1.00 46.28 N
ATOM 21 C2 A A 554 3.400 97.019 101.696 1.00 46.62 C
ATOM 22 N3 A A 554 3.617 95.754 101.339 1.00 47.26 N
ATOM 23 C4 A A 554 2.476 95.045 101.381 1.00 47.75 C
ATOM 24 P U A 555 3.107 89.086 103.891 1.00 51.36 P
ATOM 25 OP1 U A 555 4.049 88.066 104.404 1.00 47.20 O
ATOM 26 OP2 U A 555 1.671 88.735 103.708 1.00 50.57 O
ATOM 27 O5' U A 555 3.154 90.381 104.824 1.00 49.20 O
TER
ATOM 1 O3' A B 579 -6.393 102.666 106.345 1.00 61.71 O
ATOM 2 P G B 580 -6.384 103.014 104.776 1.00 61.97 P
ATOM 3 OP1 G B 580 -6.229 104.487 104.646 1.00 60.74 O
ATOM 4 OP2 G B 580 -7.547 102.340 104.139 1.00 62.09 O
ATOM 5 O5' G B 580 -5.090 102.267 104.220 1.00 60.07 O
ATOM 6 C5' G B 580 -3.763 102.577 104.700 1.00 55.78 C
ATOM 7 C4' G B 580 -2.766 101.628 104.081 1.00 55.35 C
ATOM 8 O4' G B 580 -3.000 100.288 104.586 1.00 54.93 O
ATOM 9 C3' G B 580 -2.876 101.506 102.565 1.00 54.68 C
ATOM 10 O3' G B 580 -2.057 102.460 101.910 1.00 55.30 O
ATOM 11 C2' G B 580 -2.362 100.097 102.289 1.00 53.98 C
ATOM 12 O2' G B 580 -0.960 100.032 102.137 1.00 55.61 O
ATOM 13 C1' G B 580 -2.807 99.340 103.544 1.00 53.77 C
ATOM 14 N9 G B 580 -4.075 98.661 103.316 1.00 52.66 N
ATOM 15 C8 G B 580 -5.330 99.141 103.614 1.00 54.73 C
ATOM 16 N7 G B 580 -6.286 98.341 103.239 1.00 54.42 N
ATOM 17 C5 G B 580 -5.625 97.262 102.673 1.00 52.99 C
ATOM 18 C6 G B 580 -6.139 96.099 102.092 1.00 52.46 C
ATOM 19 O6 G B 580 -7.318 95.781 101.951 1.00 55.85 O
ATOM 20 N1 G B 580 -5.128 95.258 101.644 1.00 50.87 N
ATOM 21 C2 G B 580 -3.785 95.517 101.747 1.00 51.35 C
ATOM 22 N2 G B 580 -2.958 94.579 101.265 1.00 51.65 N
ATOM 23 N3 G B 580 -3.288 96.615 102.286 1.00 51.87 N
ATOM 24 C4 G B 580 -4.259 97.439 102.726 1.00 52.28 C
ATOM 25 P A B 581 -2.644 103.906 101.534 1.00 58.66 P
ATOM 26 OP1 A B 581 -2.454 104.789 102.717 1.00 56.93 O
ATOM 27 OP2 A B 581 -3.997 103.771 100.940 1.00 58.01 O
ATOM 28 O5' A B 581 -1.650 104.393 100.388 1.00 58.66 O
TER
Atoms:
OP1: (-1.088,88.459,99.861)
OP2: (-1.900,90.767,100.684)
C3': (3.069,90.696,101.824)
C1': (3.359,92.765,100.716)
C5': (1.707,89.697,99.911)
O4': (2.816,91.839,99.792)
C8: (0.972,93.459,101.272)
O2': (5.275,91.702,101.701)
C6: (1.128,96.883,102.075)
C5: (1.223,95.519,101.727)
C4: (2.476,95.045,101.381)
P: (-0.929,89.937,99.916)
C4': (2.920,90.489,100.326)
C2': (3.901,91.967,101.902)
C2: (3.400,97.019,101.696)
N1: (2.261,97.616,102.057)
N3: (3.617,95.754,101.339)
N6: (-0.012,97.484,102.410)
N7: (0.280,94.506,101.653)
N9: (2.310,93.710,101.100)
O5': (0.519,90.285,100.481)
O3': (3.686,89.591,102.475)
OP2: (-1.900,90.767,100.684)
C3': (3.069,90.696,101.824)
C1': (3.359,92.765,100.716)
C5': (1.707,89.697,99.911)
O4': (2.816,91.839,99.792)
C8: (0.972,93.459,101.272)
O2': (5.275,91.702,101.701)
C6: (1.128,96.883,102.075)
C5: (1.223,95.519,101.727)
C4: (2.476,95.045,101.381)
P: (-0.929,89.937,99.916)
C4': (2.920,90.489,100.326)
C2': (3.901,91.967,101.902)
C2: (3.400,97.019,101.696)
N1: (2.261,97.616,102.057)
N3: (3.617,95.754,101.339)
N6: (-0.012,97.484,102.410)
N7: (0.280,94.506,101.653)
N9: (2.310,93.710,101.100)
O5': (0.519,90.285,100.481)
O3': (3.686,89.591,102.475)
OP1: (-6.229,104.487,104.646)
OP2: (-7.547,102.340,104.139)
C3': (-2.876,101.506,102.565)
C1': (-2.807,99.340,103.544)
C5': (-3.763,102.577,104.700)
O6: (-7.318,95.781,101.951)
O4': (-3.000,100.288,104.586)
C8: (-5.330,99.141,103.614)
C2: (-3.785,95.517,101.747)
C6: (-6.139,96.099,102.092)
C5: (-5.625,97.262,102.673)
C4: (-4.259,97.439,102.726)
P: (-6.384,103.014,104.776)
C4': (-2.766,101.628,104.081)
C2': (-2.362,100.097,102.289)
O2': (-0.960,100.032,102.137)
N1: (-5.128,95.258,101.644)
N2: (-2.958,94.579,101.265)
N3: (-3.288,96.615,102.286)
N7: (-6.286,98.341,103.239)
N9: (-4.075,98.661,103.316)
O5': (-5.090,102.267,104.220)
O3': (-2.057,102.460,101.910)
OP2: (-7.547,102.340,104.139)
C3': (-2.876,101.506,102.565)
C1': (-2.807,99.340,103.544)
C5': (-3.763,102.577,104.700)
O6: (-7.318,95.781,101.951)
O4': (-3.000,100.288,104.586)
C8: (-5.330,99.141,103.614)
C2: (-3.785,95.517,101.747)
C6: (-6.139,96.099,102.092)
C5: (-5.625,97.262,102.673)
C4: (-4.259,97.439,102.726)
P: (-6.384,103.014,104.776)
C4': (-2.766,101.628,104.081)
C2': (-2.362,100.097,102.289)
O2': (-0.960,100.032,102.137)
N1: (-5.128,95.258,101.644)
N2: (-2.958,94.579,101.265)
N3: (-3.288,96.615,102.286)
N7: (-6.286,98.341,103.239)
N9: (-4.075,98.661,103.316)
O5': (-5.090,102.267,104.220)
O3': (-2.057,102.460,101.910)
Image (generated by PyMOL):