Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2889:2884
Extra
PDB:
ATOM 1 O3' A A 888 -35.356 -39.513 94.014 1.00118.66 O
ATOM 2 P A A 889 -34.225 -39.640 95.144 1.00119.74 P
ATOM 3 OP1 A A 889 -33.731 -41.038 95.127 1.00121.44 O
ATOM 4 OP2 A A 889 -34.795 -39.104 96.399 1.00119.56 O
ATOM 5 O5' A A 889 -33.099 -38.670 94.600 1.00118.45 O
ATOM 6 C5' A A 889 -32.713 -38.695 93.234 1.00118.02 C
ATOM 7 C4' A A 889 -32.125 -37.377 92.821 1.00116.39 C
ATOM 8 O4' A A 889 -33.185 -36.395 92.705 1.00115.16 O
ATOM 9 C3' A A 889 -31.150 -36.756 93.810 1.00116.10 C
ATOM 10 O3' A A 889 -29.837 -37.268 93.684 1.00116.78 O
ATOM 11 C2' A A 889 -31.256 -35.270 93.503 1.00114.29 C
ATOM 12 O2' A A 889 -30.493 -34.935 92.345 1.00113.60 O
ATOM 13 C1' A A 889 -32.741 -35.141 93.168 1.00113.92 C
ATOM 14 N9 A A 889 -33.546 -34.768 94.350 1.00113.87 N
ATOM 15 C8 A A 889 -34.161 -35.607 95.246 1.00115.11 C
ATOM 16 N7 A A 889 -34.813 -34.987 96.200 1.00114.75 N
ATOM 17 C5 A A 889 -34.614 -33.642 95.918 1.00113.17 C
ATOM 18 C6 A A 889 -35.049 -32.466 96.561 1.00112.13 C
ATOM 19 N6 A A 889 -35.810 -32.463 97.670 1.00112.56 N
ATOM 20 N1 A A 889 -34.681 -31.280 96.017 1.00110.66 N
ATOM 21 C2 A A 889 -33.927 -31.293 94.911 1.00110.29 C
ATOM 22 N3 A A 889 -33.462 -32.332 94.220 1.00111.17 N
ATOM 23 C4 A A 889 -33.839 -33.493 94.782 1.00112.61 C
ATOM 24 P U A 890 -28.817 -37.189 94.921 1.00126.33 P
ATOM 25 OP1 U A 890 -27.579 -37.886 94.500 1.00127.15 O
ATOM 26 OP2 U A 890 -29.546 -37.682 96.119 1.00127.27 O
ATOM 27 O5' U A 890 -28.537 -35.624 95.061 1.00124.62 O
TER
ATOM 1 O3' G B 883 -37.507 -32.768 106.337 1.00114.51 O
ATOM 2 P G B 884 -39.065 -32.531 106.003 1.00123.62 P
ATOM 3 OP1 G B 884 -39.474 -31.287 106.704 1.00122.70 O
ATOM 4 OP2 G B 884 -39.781 -33.800 106.318 1.00125.21 O
ATOM 5 O5' G B 884 -39.058 -32.284 104.428 1.00122.48 O
ATOM 6 C5' G B 884 -38.601 -31.056 103.882 1.00120.87 C
ATOM 7 C4' G B 884 -38.561 -31.108 102.378 1.00120.16 C
ATOM 8 O4' G B 884 -37.513 -32.022 101.954 1.00120.90 O
ATOM 9 C3' G B 884 -39.818 -31.636 101.710 1.00120.43 C
ATOM 10 O3' G B 884 -40.817 -30.647 101.541 1.00119.36 O
ATOM 11 C2' G B 884 -39.285 -32.228 100.411 1.00120.42 C
ATOM 12 O2' G B 884 -39.006 -31.213 99.465 1.00118.91 O
ATOM 13 C1' G B 884 -37.961 -32.818 100.888 1.00121.25 C
ATOM 14 N9 G B 884 -38.146 -34.172 101.408 1.00122.98 N
ATOM 15 C8 G B 884 -38.758 -34.416 102.603 1.00123.85 C
ATOM 16 N7 G B 884 -38.859 -35.662 102.898 1.00125.40 N
ATOM 17 C5 G B 884 -38.273 -36.294 101.819 1.00125.56 C
ATOM 18 C6 G B 884 -38.116 -37.681 101.620 1.00127.05 C
ATOM 19 O6 G B 884 -38.479 -38.591 102.385 1.00128.50 O
ATOM 20 N1 G B 884 -37.469 -37.923 100.407 1.00126.75 N
ATOM 21 C2 G B 884 -37.044 -36.956 99.517 1.00125.22 C
ATOM 22 N2 G B 884 -36.444 -37.400 98.399 1.00125.24 N
ATOM 23 N3 G B 884 -37.205 -35.650 99.700 1.00123.82 N
ATOM 24 C4 G B 884 -37.826 -35.393 100.871 1.00124.08 C
ATOM 25 P U B 885 -42.357 -30.984 101.875 1.00114.39 P
ATOM 26 OP1 U B 885 -43.014 -29.718 102.289 1.00113.34 O
ATOM 27 OP2 U B 885 -42.363 -32.123 102.822 1.00116.06 O
ATOM 28 O5' U B 885 -42.918 -31.441 100.460 1.00114.25 O
TER
ATOM 2 P A A 889 -34.225 -39.640 95.144 1.00119.74 P
ATOM 3 OP1 A A 889 -33.731 -41.038 95.127 1.00121.44 O
ATOM 4 OP2 A A 889 -34.795 -39.104 96.399 1.00119.56 O
ATOM 5 O5' A A 889 -33.099 -38.670 94.600 1.00118.45 O
ATOM 6 C5' A A 889 -32.713 -38.695 93.234 1.00118.02 C
ATOM 7 C4' A A 889 -32.125 -37.377 92.821 1.00116.39 C
ATOM 8 O4' A A 889 -33.185 -36.395 92.705 1.00115.16 O
ATOM 9 C3' A A 889 -31.150 -36.756 93.810 1.00116.10 C
ATOM 10 O3' A A 889 -29.837 -37.268 93.684 1.00116.78 O
ATOM 11 C2' A A 889 -31.256 -35.270 93.503 1.00114.29 C
ATOM 12 O2' A A 889 -30.493 -34.935 92.345 1.00113.60 O
ATOM 13 C1' A A 889 -32.741 -35.141 93.168 1.00113.92 C
ATOM 14 N9 A A 889 -33.546 -34.768 94.350 1.00113.87 N
ATOM 15 C8 A A 889 -34.161 -35.607 95.246 1.00115.11 C
ATOM 16 N7 A A 889 -34.813 -34.987 96.200 1.00114.75 N
ATOM 17 C5 A A 889 -34.614 -33.642 95.918 1.00113.17 C
ATOM 18 C6 A A 889 -35.049 -32.466 96.561 1.00112.13 C
ATOM 19 N6 A A 889 -35.810 -32.463 97.670 1.00112.56 N
ATOM 20 N1 A A 889 -34.681 -31.280 96.017 1.00110.66 N
ATOM 21 C2 A A 889 -33.927 -31.293 94.911 1.00110.29 C
ATOM 22 N3 A A 889 -33.462 -32.332 94.220 1.00111.17 N
ATOM 23 C4 A A 889 -33.839 -33.493 94.782 1.00112.61 C
ATOM 24 P U A 890 -28.817 -37.189 94.921 1.00126.33 P
ATOM 25 OP1 U A 890 -27.579 -37.886 94.500 1.00127.15 O
ATOM 26 OP2 U A 890 -29.546 -37.682 96.119 1.00127.27 O
ATOM 27 O5' U A 890 -28.537 -35.624 95.061 1.00124.62 O
TER
ATOM 1 O3' G B 883 -37.507 -32.768 106.337 1.00114.51 O
ATOM 2 P G B 884 -39.065 -32.531 106.003 1.00123.62 P
ATOM 3 OP1 G B 884 -39.474 -31.287 106.704 1.00122.70 O
ATOM 4 OP2 G B 884 -39.781 -33.800 106.318 1.00125.21 O
ATOM 5 O5' G B 884 -39.058 -32.284 104.428 1.00122.48 O
ATOM 6 C5' G B 884 -38.601 -31.056 103.882 1.00120.87 C
ATOM 7 C4' G B 884 -38.561 -31.108 102.378 1.00120.16 C
ATOM 8 O4' G B 884 -37.513 -32.022 101.954 1.00120.90 O
ATOM 9 C3' G B 884 -39.818 -31.636 101.710 1.00120.43 C
ATOM 10 O3' G B 884 -40.817 -30.647 101.541 1.00119.36 O
ATOM 11 C2' G B 884 -39.285 -32.228 100.411 1.00120.42 C
ATOM 12 O2' G B 884 -39.006 -31.213 99.465 1.00118.91 O
ATOM 13 C1' G B 884 -37.961 -32.818 100.888 1.00121.25 C
ATOM 14 N9 G B 884 -38.146 -34.172 101.408 1.00122.98 N
ATOM 15 C8 G B 884 -38.758 -34.416 102.603 1.00123.85 C
ATOM 16 N7 G B 884 -38.859 -35.662 102.898 1.00125.40 N
ATOM 17 C5 G B 884 -38.273 -36.294 101.819 1.00125.56 C
ATOM 18 C6 G B 884 -38.116 -37.681 101.620 1.00127.05 C
ATOM 19 O6 G B 884 -38.479 -38.591 102.385 1.00128.50 O
ATOM 20 N1 G B 884 -37.469 -37.923 100.407 1.00126.75 N
ATOM 21 C2 G B 884 -37.044 -36.956 99.517 1.00125.22 C
ATOM 22 N2 G B 884 -36.444 -37.400 98.399 1.00125.24 N
ATOM 23 N3 G B 884 -37.205 -35.650 99.700 1.00123.82 N
ATOM 24 C4 G B 884 -37.826 -35.393 100.871 1.00124.08 C
ATOM 25 P U B 885 -42.357 -30.984 101.875 1.00114.39 P
ATOM 26 OP1 U B 885 -43.014 -29.718 102.289 1.00113.34 O
ATOM 27 OP2 U B 885 -42.363 -32.123 102.822 1.00116.06 O
ATOM 28 O5' U B 885 -42.918 -31.441 100.460 1.00114.25 O
TER
Atoms:
OP1: (-33.731,-41.038,95.127)
OP2: (-34.795,-39.104,96.399)
C3': (-31.150,-36.756,93.810)
C1': (-32.741,-35.141,93.168)
C5': (-32.713,-38.695,93.234)
O4': (-33.185,-36.395,92.705)
C8: (-34.161,-35.607,95.246)
O2': (-30.493,-34.935,92.345)
C6: (-35.049,-32.466,96.561)
C5: (-34.614,-33.642,95.918)
C4: (-33.839,-33.493,94.782)
P: (-34.225,-39.640,95.144)
C4': (-32.125,-37.377,92.821)
C2': (-31.256,-35.270,93.503)
C2: (-33.927,-31.293,94.911)
N1: (-34.681,-31.280,96.017)
N3: (-33.462,-32.332,94.220)
N6: (-35.810,-32.463,97.670)
N7: (-34.813,-34.987,96.200)
N9: (-33.546,-34.768,94.350)
O5': (-33.099,-38.670,94.600)
O3': (-29.837,-37.268,93.684)
OP2: (-34.795,-39.104,96.399)
C3': (-31.150,-36.756,93.810)
C1': (-32.741,-35.141,93.168)
C5': (-32.713,-38.695,93.234)
O4': (-33.185,-36.395,92.705)
C8: (-34.161,-35.607,95.246)
O2': (-30.493,-34.935,92.345)
C6: (-35.049,-32.466,96.561)
C5: (-34.614,-33.642,95.918)
C4: (-33.839,-33.493,94.782)
P: (-34.225,-39.640,95.144)
C4': (-32.125,-37.377,92.821)
C2': (-31.256,-35.270,93.503)
C2: (-33.927,-31.293,94.911)
N1: (-34.681,-31.280,96.017)
N3: (-33.462,-32.332,94.220)
N6: (-35.810,-32.463,97.670)
N7: (-34.813,-34.987,96.200)
N9: (-33.546,-34.768,94.350)
O5': (-33.099,-38.670,94.600)
O3': (-29.837,-37.268,93.684)
OP1: (-39.474,-31.287,106.704)
OP2: (-39.781,-33.800,106.318)
C3': (-39.818,-31.636,101.710)
C1': (-37.961,-32.818,100.888)
C5': (-38.601,-31.056,103.882)
O6: (-38.479,-38.591,102.385)
O4': (-37.513,-32.022,101.954)
C8: (-38.758,-34.416,102.603)
C2: (-37.044,-36.956,99.517)
C6: (-38.116,-37.681,101.620)
C5: (-38.273,-36.294,101.819)
C4: (-37.826,-35.393,100.871)
P: (-39.065,-32.531,106.003)
C4': (-38.561,-31.108,102.378)
C2': (-39.285,-32.228,100.411)
O2': (-39.006,-31.213,99.465)
N1: (-37.469,-37.923,100.407)
N2: (-36.444,-37.400,98.399)
N3: (-37.205,-35.650,99.700)
N7: (-38.859,-35.662,102.898)
N9: (-38.146,-34.172,101.408)
O5': (-39.058,-32.284,104.428)
O3': (-40.817,-30.647,101.541)
OP2: (-39.781,-33.800,106.318)
C3': (-39.818,-31.636,101.710)
C1': (-37.961,-32.818,100.888)
C5': (-38.601,-31.056,103.882)
O6: (-38.479,-38.591,102.385)
O4': (-37.513,-32.022,101.954)
C8: (-38.758,-34.416,102.603)
C2: (-37.044,-36.956,99.517)
C6: (-38.116,-37.681,101.620)
C5: (-38.273,-36.294,101.819)
C4: (-37.826,-35.393,100.871)
P: (-39.065,-32.531,106.003)
C4': (-38.561,-31.108,102.378)
C2': (-39.285,-32.228,100.411)
O2': (-39.006,-31.213,99.465)
N1: (-37.469,-37.923,100.407)
N2: (-36.444,-37.400,98.399)
N3: (-37.205,-35.650,99.700)
N7: (-38.859,-35.662,102.898)
N9: (-38.146,-34.172,101.408)
O5': (-39.058,-32.284,104.428)
O3': (-40.817,-30.647,101.541)
Image (generated by PyMOL):