Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A918:A1309
Extra
PDB:
ATOM 1 O3' G A 917 237.876 109.279 -10.708 1.00 37.53 O
ATOM 2 P A A 918 238.435 109.310 -9.203 1.00 38.81 P
ATOM 3 OP1 A A 918 238.921 107.943 -8.821 1.00 37.56 O
ATOM 4 OP2 A A 918 237.415 109.972 -8.359 1.00 40.99 O
ATOM 5 O5' A A 918 239.665 110.289 -9.312 1.00 38.36 O
ATOM 6 C5' A A 918 240.927 109.837 -9.813 1.00 37.96 C
ATOM 7 C4' A A 918 242.037 110.652 -9.208 1.00 36.01 C
ATOM 8 O4' A A 918 241.953 112.025 -9.666 1.00 34.32 O
ATOM 9 C3' A A 918 241.993 110.736 -7.697 1.00 35.25 C
ATOM 10 O3' A A 918 242.662 109.621 -7.148 1.00 36.91 O
ATOM 11 C2' A A 918 242.727 112.035 -7.418 1.00 34.76 C
ATOM 12 O2' A A 918 244.113 111.814 -7.469 1.00 35.21 O
ATOM 13 C1' A A 918 242.350 112.890 -8.628 1.00 34.07 C
ATOM 14 N9 A A 918 241.307 113.904 -8.443 1.00 34.51 N
ATOM 15 C8 A A 918 240.013 113.876 -8.905 1.00 34.72 C
ATOM 16 N7 A A 918 239.346 114.987 -8.689 1.00 32.88 N
ATOM 17 C5 A A 918 240.249 115.786 -8.008 1.00 34.03 C
ATOM 18 C6 A A 918 240.159 117.091 -7.509 1.00 34.50 C
ATOM 19 N6 A A 918 239.078 117.858 -7.632 1.00 35.46 N
ATOM 20 N1 A A 918 241.233 117.595 -6.875 1.00 35.15 N
ATOM 21 C2 A A 918 242.320 116.831 -6.759 1.00 34.30 C
ATOM 22 N3 A A 918 242.532 115.596 -7.192 1.00 33.83 N
ATOM 23 C4 A A 918 241.448 115.123 -7.821 1.00 34.21 C
ATOM 24 P G A 919 242.252 109.078 -5.686 1.00 39.76 P
ATOM 25 OP1 G A 919 243.029 107.814 -5.444 1.00 37.99 O
ATOM 26 OP2 G A 919 240.776 109.069 -5.573 1.00 39.78 O
ATOM 27 O5' G A 919 242.824 110.184 -4.718 1.00 39.27 O
TER
ATOM 1 O3' A B1308 252.228 108.709 -6.833 1.00 50.72 O
ATOM 2 P A B1309 252.182 109.121 -8.380 1.00 49.88 P
ATOM 3 OP1 A B1309 252.550 107.897 -9.152 1.00 48.87 O
ATOM 4 OP2 A B1309 252.953 110.379 -8.533 1.00 48.46 O
ATOM 5 O5' A B1309 250.641 109.420 -8.647 1.00 50.10 O
ATOM 6 C5' A B1309 249.649 108.382 -8.490 1.00 47.54 C
ATOM 7 C4' A B1309 248.266 108.982 -8.394 1.00 45.15 C
ATOM 8 O4' A B1309 248.191 109.835 -7.219 1.00 43.89 O
ATOM 9 C3' A B1309 247.856 109.892 -9.542 1.00 44.20 C
ATOM 10 O3' A B1309 247.321 109.187 -10.638 1.00 42.99 O
ATOM 11 C2' A B1309 246.790 110.764 -8.902 1.00 44.41 C
ATOM 12 O2' A B1309 245.550 110.097 -8.841 1.00 46.05 O
ATOM 13 C1' A B1309 247.327 110.926 -7.482 1.00 43.74 C
ATOM 14 N9 A B1309 248.061 112.183 -7.319 1.00 42.18 N
ATOM 15 C8 A B1309 249.412 112.395 -7.300 1.00 41.15 C
ATOM 16 N7 A B1309 249.746 113.652 -7.136 1.00 40.56 N
ATOM 17 C5 A B1309 248.533 114.311 -7.035 1.00 39.31 C
ATOM 18 C6 A B1309 248.206 115.657 -6.835 1.00 39.44 C
ATOM 19 N6 A B1309 249.110 116.620 -6.675 1.00 40.23 N
ATOM 20 N1 A B1309 246.897 115.988 -6.797 1.00 39.85 N
ATOM 21 C2 A B1309 245.989 115.021 -6.934 1.00 38.74 C
ATOM 22 N3 A B1309 246.172 113.719 -7.111 1.00 39.87 N
ATOM 23 C4 A B1309 247.485 113.424 -7.154 1.00 41.25 C
ATOM 24 P G B1310 247.475 109.798 -12.119 1.00 42.01 P
ATOM 25 OP1 G B1310 246.558 109.061 -13.048 1.00 41.32 O
ATOM 26 OP2 G B1310 248.933 109.804 -12.393 1.00 45.83 O
ATOM 27 O5' G B1310 246.967 111.306 -11.993 1.00 39.48 O
TER
ATOM 2 P A A 918 238.435 109.310 -9.203 1.00 38.81 P
ATOM 3 OP1 A A 918 238.921 107.943 -8.821 1.00 37.56 O
ATOM 4 OP2 A A 918 237.415 109.972 -8.359 1.00 40.99 O
ATOM 5 O5' A A 918 239.665 110.289 -9.312 1.00 38.36 O
ATOM 6 C5' A A 918 240.927 109.837 -9.813 1.00 37.96 C
ATOM 7 C4' A A 918 242.037 110.652 -9.208 1.00 36.01 C
ATOM 8 O4' A A 918 241.953 112.025 -9.666 1.00 34.32 O
ATOM 9 C3' A A 918 241.993 110.736 -7.697 1.00 35.25 C
ATOM 10 O3' A A 918 242.662 109.621 -7.148 1.00 36.91 O
ATOM 11 C2' A A 918 242.727 112.035 -7.418 1.00 34.76 C
ATOM 12 O2' A A 918 244.113 111.814 -7.469 1.00 35.21 O
ATOM 13 C1' A A 918 242.350 112.890 -8.628 1.00 34.07 C
ATOM 14 N9 A A 918 241.307 113.904 -8.443 1.00 34.51 N
ATOM 15 C8 A A 918 240.013 113.876 -8.905 1.00 34.72 C
ATOM 16 N7 A A 918 239.346 114.987 -8.689 1.00 32.88 N
ATOM 17 C5 A A 918 240.249 115.786 -8.008 1.00 34.03 C
ATOM 18 C6 A A 918 240.159 117.091 -7.509 1.00 34.50 C
ATOM 19 N6 A A 918 239.078 117.858 -7.632 1.00 35.46 N
ATOM 20 N1 A A 918 241.233 117.595 -6.875 1.00 35.15 N
ATOM 21 C2 A A 918 242.320 116.831 -6.759 1.00 34.30 C
ATOM 22 N3 A A 918 242.532 115.596 -7.192 1.00 33.83 N
ATOM 23 C4 A A 918 241.448 115.123 -7.821 1.00 34.21 C
ATOM 24 P G A 919 242.252 109.078 -5.686 1.00 39.76 P
ATOM 25 OP1 G A 919 243.029 107.814 -5.444 1.00 37.99 O
ATOM 26 OP2 G A 919 240.776 109.069 -5.573 1.00 39.78 O
ATOM 27 O5' G A 919 242.824 110.184 -4.718 1.00 39.27 O
TER
ATOM 1 O3' A B1308 252.228 108.709 -6.833 1.00 50.72 O
ATOM 2 P A B1309 252.182 109.121 -8.380 1.00 49.88 P
ATOM 3 OP1 A B1309 252.550 107.897 -9.152 1.00 48.87 O
ATOM 4 OP2 A B1309 252.953 110.379 -8.533 1.00 48.46 O
ATOM 5 O5' A B1309 250.641 109.420 -8.647 1.00 50.10 O
ATOM 6 C5' A B1309 249.649 108.382 -8.490 1.00 47.54 C
ATOM 7 C4' A B1309 248.266 108.982 -8.394 1.00 45.15 C
ATOM 8 O4' A B1309 248.191 109.835 -7.219 1.00 43.89 O
ATOM 9 C3' A B1309 247.856 109.892 -9.542 1.00 44.20 C
ATOM 10 O3' A B1309 247.321 109.187 -10.638 1.00 42.99 O
ATOM 11 C2' A B1309 246.790 110.764 -8.902 1.00 44.41 C
ATOM 12 O2' A B1309 245.550 110.097 -8.841 1.00 46.05 O
ATOM 13 C1' A B1309 247.327 110.926 -7.482 1.00 43.74 C
ATOM 14 N9 A B1309 248.061 112.183 -7.319 1.00 42.18 N
ATOM 15 C8 A B1309 249.412 112.395 -7.300 1.00 41.15 C
ATOM 16 N7 A B1309 249.746 113.652 -7.136 1.00 40.56 N
ATOM 17 C5 A B1309 248.533 114.311 -7.035 1.00 39.31 C
ATOM 18 C6 A B1309 248.206 115.657 -6.835 1.00 39.44 C
ATOM 19 N6 A B1309 249.110 116.620 -6.675 1.00 40.23 N
ATOM 20 N1 A B1309 246.897 115.988 -6.797 1.00 39.85 N
ATOM 21 C2 A B1309 245.989 115.021 -6.934 1.00 38.74 C
ATOM 22 N3 A B1309 246.172 113.719 -7.111 1.00 39.87 N
ATOM 23 C4 A B1309 247.485 113.424 -7.154 1.00 41.25 C
ATOM 24 P G B1310 247.475 109.798 -12.119 1.00 42.01 P
ATOM 25 OP1 G B1310 246.558 109.061 -13.048 1.00 41.32 O
ATOM 26 OP2 G B1310 248.933 109.804 -12.393 1.00 45.83 O
ATOM 27 O5' G B1310 246.967 111.306 -11.993 1.00 39.48 O
TER
Atoms:
OP1: (238.921,107.943,-8.821)
OP2: (237.415,109.972,-8.359)
C3': (241.993,110.736,-7.697)
C1': (242.350,112.890,-8.628)
C5': (240.927,109.837,-9.813)
O4': (241.953,112.025,-9.666)
C8: (240.013,113.876,-8.905)
O2': (244.113,111.814,-7.469)
C6: (240.159,117.091,-7.509)
C5: (240.249,115.786,-8.008)
C4: (241.448,115.123,-7.821)
P: (238.435,109.310,-9.203)
C4': (242.037,110.652,-9.208)
C2': (242.727,112.035,-7.418)
C2: (242.320,116.831,-6.759)
N1: (241.233,117.595,-6.875)
N3: (242.532,115.596,-7.192)
N6: (239.078,117.858,-7.632)
N7: (239.346,114.987,-8.689)
N9: (241.307,113.904,-8.443)
O5': (239.665,110.289,-9.312)
O3': (242.662,109.621,-7.148)
OP2: (237.415,109.972,-8.359)
C3': (241.993,110.736,-7.697)
C1': (242.350,112.890,-8.628)
C5': (240.927,109.837,-9.813)
O4': (241.953,112.025,-9.666)
C8: (240.013,113.876,-8.905)
O2': (244.113,111.814,-7.469)
C6: (240.159,117.091,-7.509)
C5: (240.249,115.786,-8.008)
C4: (241.448,115.123,-7.821)
P: (238.435,109.310,-9.203)
C4': (242.037,110.652,-9.208)
C2': (242.727,112.035,-7.418)
C2: (242.320,116.831,-6.759)
N1: (241.233,117.595,-6.875)
N3: (242.532,115.596,-7.192)
N6: (239.078,117.858,-7.632)
N7: (239.346,114.987,-8.689)
N9: (241.307,113.904,-8.443)
O5': (239.665,110.289,-9.312)
O3': (242.662,109.621,-7.148)
OP1: (252.550,107.897,-9.152)
OP2: (252.953,110.379,-8.533)
C3': (247.856,109.892,-9.542)
C1': (247.327,110.926,-7.482)
C5': (249.649,108.382,-8.490)
O4': (248.191,109.835,-7.219)
C8: (249.412,112.395,-7.300)
O2': (245.550,110.097,-8.841)
C6: (248.206,115.657,-6.835)
C5: (248.533,114.311,-7.035)
C4: (247.485,113.424,-7.154)
P: (252.182,109.121,-8.380)
C4': (248.266,108.982,-8.394)
C2': (246.790,110.764,-8.902)
C2: (245.989,115.021,-6.934)
N1: (246.897,115.988,-6.797)
N3: (246.172,113.719,-7.111)
N6: (249.110,116.620,-6.675)
N7: (249.746,113.652,-7.136)
N9: (248.061,112.183,-7.319)
O5': (250.641,109.420,-8.647)
O3': (247.321,109.187,-10.638)
OP2: (252.953,110.379,-8.533)
C3': (247.856,109.892,-9.542)
C1': (247.327,110.926,-7.482)
C5': (249.649,108.382,-8.490)
O4': (248.191,109.835,-7.219)
C8: (249.412,112.395,-7.300)
O2': (245.550,110.097,-8.841)
C6: (248.206,115.657,-6.835)
C5: (248.533,114.311,-7.035)
C4: (247.485,113.424,-7.154)
P: (252.182,109.121,-8.380)
C4': (248.266,108.982,-8.394)
C2': (246.790,110.764,-8.902)
C2: (245.989,115.021,-6.934)
N1: (246.897,115.988,-6.797)
N3: (246.172,113.719,-7.111)
N6: (249.110,116.620,-6.675)
N7: (249.746,113.652,-7.136)
N9: (248.061,112.183,-7.319)
O5': (250.641,109.420,-8.647)
O3': (247.321,109.187,-10.638)
Image (generated by PyMOL):