Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A918:A1309
Extra
PDB:
ATOM 1 O3' G A 917 238.322 109.438 -10.572 1.00 67.09 O
ATOM 2 P A A 918 238.942 109.470 -9.089 1.00 68.66 P
ATOM 3 OP1 A A 918 239.436 108.092 -8.771 1.00 67.01 O
ATOM 4 OP2 A A 918 237.962 110.128 -8.176 1.00 70.33 O
ATOM 5 O5' A A 918 240.178 110.441 -9.243 1.00 66.67 O
ATOM 6 C5' A A 918 241.449 109.959 -9.692 1.00 64.82 C
ATOM 7 C4' A A 918 242.546 110.775 -9.071 1.00 62.63 C
ATOM 8 O4' A A 918 242.436 112.156 -9.502 1.00 60.67 O
ATOM 9 C3' A A 918 242.486 110.836 -7.560 1.00 61.65 C
ATOM 10 O3' A A 918 243.178 109.743 -7.008 1.00 63.55 O
ATOM 11 C2' A A 918 243.198 112.136 -7.250 1.00 60.95 C
ATOM 12 O2' A A 918 244.584 111.922 -7.302 1.00 61.85 O
ATOM 13 C1' A A 918 242.817 113.009 -8.445 1.00 59.96 C
ATOM 14 N9 A A 918 241.762 114.006 -8.234 1.00 59.15 N
ATOM 15 C8 A A 918 240.446 113.932 -8.620 1.00 60.39 C
ATOM 16 N7 A A 918 239.765 115.035 -8.404 1.00 58.36 N
ATOM 17 C5 A A 918 240.688 115.881 -7.809 1.00 57.78 C
ATOM 18 C6 A A 918 240.596 117.208 -7.365 1.00 57.73 C
ATOM 19 N6 A A 918 239.492 117.949 -7.466 1.00 57.79 N
ATOM 20 N1 A A 918 241.691 117.761 -6.815 1.00 57.42 N
ATOM 21 C2 A A 918 242.798 117.024 -6.725 1.00 58.43 C
ATOM 22 N3 A A 918 243.013 115.773 -7.116 1.00 57.98 N
ATOM 23 C4 A A 918 241.908 115.251 -7.663 1.00 58.03 C
ATOM 24 P G A 919 242.746 109.172 -5.570 1.00 66.94 P
ATOM 25 OP1 G A 919 243.501 107.896 -5.335 1.00 64.69 O
ATOM 26 OP2 G A 919 241.257 109.171 -5.511 1.00 67.45 O
ATOM 27 O5' G A 919 243.300 110.267 -4.558 1.00 67.34 O
TER
ATOM 1 O3' A B1308 252.918 108.878 -6.830 1.00 81.11 O
ATOM 2 P A B1309 252.692 109.341 -8.350 1.00 81.07 P
ATOM 3 OP1 A B1309 252.966 108.144 -9.202 1.00 80.44 O
ATOM 4 OP2 A B1309 253.438 110.609 -8.572 1.00 80.76 O
ATOM 5 O5' A B1309 251.134 109.648 -8.437 1.00 80.99 O
ATOM 6 C5' A B1309 250.159 108.587 -8.358 1.00 78.83 C
ATOM 7 C4' A B1309 248.768 109.163 -8.259 1.00 77.07 C
ATOM 8 O4' A B1309 248.691 110.017 -7.085 1.00 77.66 O
ATOM 9 C3' A B1309 248.353 110.072 -9.399 1.00 76.40 C
ATOM 10 O3' A B1309 247.831 109.349 -10.485 1.00 75.65 O
ATOM 11 C2' A B1309 247.284 110.943 -8.759 1.00 76.31 C
ATOM 12 O2' A B1309 246.045 110.273 -8.692 1.00 77.12 O
ATOM 13 C1' A B1309 247.816 111.099 -7.337 1.00 76.14 C
ATOM 14 N9 A B1309 248.526 112.360 -7.110 1.00 75.24 N
ATOM 15 C8 A B1309 249.872 112.572 -6.973 1.00 74.81 C
ATOM 16 N7 A B1309 250.188 113.829 -6.766 1.00 74.63 N
ATOM 17 C5 A B1309 248.970 114.488 -6.772 1.00 74.36 C
ATOM 18 C6 A B1309 248.626 115.836 -6.606 1.00 75.03 C
ATOM 19 N6 A B1309 249.515 116.801 -6.386 1.00 78.61 N
ATOM 20 N1 A B1309 247.319 116.168 -6.670 1.00 74.46 N
ATOM 21 C2 A B1309 246.429 115.202 -6.882 1.00 74.18 C
ATOM 22 N3 A B1309 246.628 113.896 -7.050 1.00 75.47 N
ATOM 23 C4 A B1309 247.938 113.600 -6.984 1.00 75.27 C
ATOM 24 P G B1310 248.045 109.907 -11.981 1.00 75.68 P
ATOM 25 OP1 G B1310 247.136 109.127 -12.880 1.00 76.43 O
ATOM 26 OP2 G B1310 249.519 109.912 -12.226 1.00 77.09 O
ATOM 27 O5' G B1310 247.513 111.418 -11.949 1.00 72.74 O
TER
ATOM 2 P A A 918 238.942 109.470 -9.089 1.00 68.66 P
ATOM 3 OP1 A A 918 239.436 108.092 -8.771 1.00 67.01 O
ATOM 4 OP2 A A 918 237.962 110.128 -8.176 1.00 70.33 O
ATOM 5 O5' A A 918 240.178 110.441 -9.243 1.00 66.67 O
ATOM 6 C5' A A 918 241.449 109.959 -9.692 1.00 64.82 C
ATOM 7 C4' A A 918 242.546 110.775 -9.071 1.00 62.63 C
ATOM 8 O4' A A 918 242.436 112.156 -9.502 1.00 60.67 O
ATOM 9 C3' A A 918 242.486 110.836 -7.560 1.00 61.65 C
ATOM 10 O3' A A 918 243.178 109.743 -7.008 1.00 63.55 O
ATOM 11 C2' A A 918 243.198 112.136 -7.250 1.00 60.95 C
ATOM 12 O2' A A 918 244.584 111.922 -7.302 1.00 61.85 O
ATOM 13 C1' A A 918 242.817 113.009 -8.445 1.00 59.96 C
ATOM 14 N9 A A 918 241.762 114.006 -8.234 1.00 59.15 N
ATOM 15 C8 A A 918 240.446 113.932 -8.620 1.00 60.39 C
ATOM 16 N7 A A 918 239.765 115.035 -8.404 1.00 58.36 N
ATOM 17 C5 A A 918 240.688 115.881 -7.809 1.00 57.78 C
ATOM 18 C6 A A 918 240.596 117.208 -7.365 1.00 57.73 C
ATOM 19 N6 A A 918 239.492 117.949 -7.466 1.00 57.79 N
ATOM 20 N1 A A 918 241.691 117.761 -6.815 1.00 57.42 N
ATOM 21 C2 A A 918 242.798 117.024 -6.725 1.00 58.43 C
ATOM 22 N3 A A 918 243.013 115.773 -7.116 1.00 57.98 N
ATOM 23 C4 A A 918 241.908 115.251 -7.663 1.00 58.03 C
ATOM 24 P G A 919 242.746 109.172 -5.570 1.00 66.94 P
ATOM 25 OP1 G A 919 243.501 107.896 -5.335 1.00 64.69 O
ATOM 26 OP2 G A 919 241.257 109.171 -5.511 1.00 67.45 O
ATOM 27 O5' G A 919 243.300 110.267 -4.558 1.00 67.34 O
TER
ATOM 1 O3' A B1308 252.918 108.878 -6.830 1.00 81.11 O
ATOM 2 P A B1309 252.692 109.341 -8.350 1.00 81.07 P
ATOM 3 OP1 A B1309 252.966 108.144 -9.202 1.00 80.44 O
ATOM 4 OP2 A B1309 253.438 110.609 -8.572 1.00 80.76 O
ATOM 5 O5' A B1309 251.134 109.648 -8.437 1.00 80.99 O
ATOM 6 C5' A B1309 250.159 108.587 -8.358 1.00 78.83 C
ATOM 7 C4' A B1309 248.768 109.163 -8.259 1.00 77.07 C
ATOM 8 O4' A B1309 248.691 110.017 -7.085 1.00 77.66 O
ATOM 9 C3' A B1309 248.353 110.072 -9.399 1.00 76.40 C
ATOM 10 O3' A B1309 247.831 109.349 -10.485 1.00 75.65 O
ATOM 11 C2' A B1309 247.284 110.943 -8.759 1.00 76.31 C
ATOM 12 O2' A B1309 246.045 110.273 -8.692 1.00 77.12 O
ATOM 13 C1' A B1309 247.816 111.099 -7.337 1.00 76.14 C
ATOM 14 N9 A B1309 248.526 112.360 -7.110 1.00 75.24 N
ATOM 15 C8 A B1309 249.872 112.572 -6.973 1.00 74.81 C
ATOM 16 N7 A B1309 250.188 113.829 -6.766 1.00 74.63 N
ATOM 17 C5 A B1309 248.970 114.488 -6.772 1.00 74.36 C
ATOM 18 C6 A B1309 248.626 115.836 -6.606 1.00 75.03 C
ATOM 19 N6 A B1309 249.515 116.801 -6.386 1.00 78.61 N
ATOM 20 N1 A B1309 247.319 116.168 -6.670 1.00 74.46 N
ATOM 21 C2 A B1309 246.429 115.202 -6.882 1.00 74.18 C
ATOM 22 N3 A B1309 246.628 113.896 -7.050 1.00 75.47 N
ATOM 23 C4 A B1309 247.938 113.600 -6.984 1.00 75.27 C
ATOM 24 P G B1310 248.045 109.907 -11.981 1.00 75.68 P
ATOM 25 OP1 G B1310 247.136 109.127 -12.880 1.00 76.43 O
ATOM 26 OP2 G B1310 249.519 109.912 -12.226 1.00 77.09 O
ATOM 27 O5' G B1310 247.513 111.418 -11.949 1.00 72.74 O
TER
Atoms:
OP1: (239.436,108.092,-8.771)
OP2: (237.962,110.128,-8.176)
C3': (242.486,110.836,-7.560)
C1': (242.817,113.009,-8.445)
C5': (241.449,109.959,-9.692)
O4': (242.436,112.156,-9.502)
C8: (240.446,113.932,-8.620)
O2': (244.584,111.922,-7.302)
C6: (240.596,117.208,-7.365)
C5: (240.688,115.881,-7.809)
C4: (241.908,115.251,-7.663)
P: (238.942,109.470,-9.089)
C4': (242.546,110.775,-9.071)
C2': (243.198,112.136,-7.250)
C2: (242.798,117.024,-6.725)
N1: (241.691,117.761,-6.815)
N3: (243.013,115.773,-7.116)
N6: (239.492,117.949,-7.466)
N7: (239.765,115.035,-8.404)
N9: (241.762,114.006,-8.234)
O5': (240.178,110.441,-9.243)
O3': (243.178,109.743,-7.008)
OP2: (237.962,110.128,-8.176)
C3': (242.486,110.836,-7.560)
C1': (242.817,113.009,-8.445)
C5': (241.449,109.959,-9.692)
O4': (242.436,112.156,-9.502)
C8: (240.446,113.932,-8.620)
O2': (244.584,111.922,-7.302)
C6: (240.596,117.208,-7.365)
C5: (240.688,115.881,-7.809)
C4: (241.908,115.251,-7.663)
P: (238.942,109.470,-9.089)
C4': (242.546,110.775,-9.071)
C2': (243.198,112.136,-7.250)
C2: (242.798,117.024,-6.725)
N1: (241.691,117.761,-6.815)
N3: (243.013,115.773,-7.116)
N6: (239.492,117.949,-7.466)
N7: (239.765,115.035,-8.404)
N9: (241.762,114.006,-8.234)
O5': (240.178,110.441,-9.243)
O3': (243.178,109.743,-7.008)
OP1: (252.966,108.144,-9.202)
OP2: (253.438,110.609,-8.572)
C3': (248.353,110.072,-9.399)
C1': (247.816,111.099,-7.337)
C5': (250.159,108.587,-8.358)
O4': (248.691,110.017,-7.085)
C8: (249.872,112.572,-6.973)
O2': (246.045,110.273,-8.692)
C6: (248.626,115.836,-6.606)
C5: (248.970,114.488,-6.772)
C4: (247.938,113.600,-6.984)
P: (252.692,109.341,-8.350)
C4': (248.768,109.163,-8.259)
C2': (247.284,110.943,-8.759)
C2: (246.429,115.202,-6.882)
N1: (247.319,116.168,-6.670)
N3: (246.628,113.896,-7.050)
N6: (249.515,116.801,-6.386)
N7: (250.188,113.829,-6.766)
N9: (248.526,112.360,-7.110)
O5': (251.134,109.648,-8.437)
O3': (247.831,109.349,-10.485)
OP2: (253.438,110.609,-8.572)
C3': (248.353,110.072,-9.399)
C1': (247.816,111.099,-7.337)
C5': (250.159,108.587,-8.358)
O4': (248.691,110.017,-7.085)
C8: (249.872,112.572,-6.973)
O2': (246.045,110.273,-8.692)
C6: (248.626,115.836,-6.606)
C5: (248.970,114.488,-6.772)
C4: (247.938,113.600,-6.984)
P: (252.692,109.341,-8.350)
C4': (248.768,109.163,-8.259)
C2': (247.284,110.943,-8.759)
C2: (246.429,115.202,-6.882)
N1: (247.319,116.168,-6.670)
N3: (246.628,113.896,-7.050)
N6: (249.515,116.801,-6.386)
N7: (250.188,113.829,-6.766)
N9: (248.526,112.360,-7.110)
O5': (251.134,109.648,-8.437)
O3': (247.831,109.349,-10.485)
Image (generated by PyMOL):