ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCS:0222:0424

Extra

PDB:
ATOM 1 O3' U A 221 49.845 107.141 21.065 1.00 49.36 O
ATOM 2 P A A 222 49.647 107.358 19.493 1.00 50.15 P
ATOM 3 OP1 A A 222 48.737 108.522 19.368 1.00 47.75 O
ATOM 4 OP2 A A 222 49.286 106.070 18.863 1.00 49.30 O
ATOM 5 O5' A A 222 51.106 107.762 18.992 1.00 50.99 O
ATOM 6 C5' A A 222 51.715 108.988 19.442 1.00 51.39 C
ATOM 7 C4' A A 222 53.184 108.989 19.127 1.00 51.60 C
ATOM 8 O4' A A 222 53.831 107.901 19.833 1.00 53.29 O
ATOM 9 C3' A A 222 53.530 108.717 17.680 1.00 53.37 C
ATOM 10 O3' A A 222 53.380 109.877 16.879 1.00 56.44 O
ATOM 11 C2' A A 222 54.974 108.238 17.775 1.00 52.49 C
ATOM 12 O2' A A 222 55.926 109.271 17.919 1.00 51.75 O
ATOM 13 C1' A A 222 54.926 107.426 19.066 1.00 52.64 C
ATOM 14 N9 A A 222 54.731 106.008 18.803 1.00 51.36 N
ATOM 15 C8 A A 222 53.558 105.312 18.684 1.00 51.75 C
ATOM 16 N7 A A 222 53.729 104.036 18.436 1.00 51.79 N
ATOM 17 C5 A A 222 55.106 103.887 18.393 1.00 50.29 C
ATOM 18 C6 A A 222 55.926 102.776 18.166 1.00 50.92 C
ATOM 19 N6 A A 222 55.458 101.550 17.938 1.00 51.69 N
ATOM 20 N1 A A 222 57.264 102.969 18.180 1.00 50.48 N
ATOM 21 C2 A A 222 57.726 104.203 18.407 1.00 50.70 C
ATOM 22 N3 A A 222 57.053 105.326 18.635 1.00 49.25 N
ATOM 23 C4 A A 222 55.733 105.095 18.615 1.00 50.04 C
ATOM 24 P C A 223 53.615 109.776 15.293 1.00 59.11 P
ATOM 25 OP1 C A 223 53.504 111.167 14.769 1.00 58.23 O
ATOM 26 OP2 C A 223 52.761 108.698 14.711 1.00 58.87 O
ATOM 27 O5' C A 223 55.127 109.289 15.197 1.00 56.21 O
TER

ATOM 1 O3' A B 423 60.827 117.037 16.840 1.00 51.16 O
ATOM 2 P A B 424 59.900 116.926 18.136 1.00 52.23 P
ATOM 3 OP1 A B 424 59.034 118.131 18.157 1.00 51.41 O
ATOM 4 OP2 A B 424 60.773 116.629 19.298 1.00 52.33 O
ATOM 5 O5' A B 424 59.010 115.643 17.830 1.00 51.09 O
ATOM 6 C5' A B 424 57.796 115.739 17.075 1.00 49.33 C
ATOM 7 C4' A B 424 57.009 114.468 17.234 1.00 49.72 C
ATOM 8 O4' A B 424 57.772 113.379 16.660 1.00 48.79 O
ATOM 9 C3' A B 424 56.785 114.058 18.680 1.00 49.76 C
ATOM 10 O3' A B 424 55.616 114.686 19.193 1.00 52.90 O
ATOM 11 C2' A B 424 56.628 112.550 18.577 1.00 47.89 C
ATOM 12 O2' A B 424 55.327 112.209 18.146 1.00 45.54 O
ATOM 13 C1' A B 424 57.617 112.221 17.456 1.00 47.28 C
ATOM 14 N9 A B 424 58.953 111.779 17.849 1.00 45.49 N
ATOM 15 C8 A B 424 60.046 112.551 18.144 1.00 45.65 C
ATOM 16 N7 A B 424 61.142 111.860 18.352 1.00 45.12 N
ATOM 17 C5 A B 424 60.734 110.540 18.207 1.00 44.35 C
ATOM 18 C6 A B 424 61.428 109.314 18.280 1.00 43.64 C
ATOM 19 N6 A B 424 62.736 109.209 18.517 1.00 42.34 N
ATOM 20 N1 A B 424 60.721 108.183 18.091 1.00 43.34 N
ATOM 21 C2 A B 424 59.411 108.282 17.846 1.00 44.55 C
ATOM 22 N3 A B 424 58.650 109.368 17.745 1.00 44.07 N
ATOM 23 C4 A B 424 59.381 110.477 17.931 1.00 44.80 C
ATOM 24 P A B 425 55.506 115.016 20.765 1.00 56.89 P
ATOM 25 OP1 A B 425 54.315 115.892 20.944 1.00 54.91 O
ATOM 26 OP2 A B 425 56.833 115.465 21.267 1.00 55.77 O
ATOM 27 O5' A B 425 55.194 113.604 21.434 1.00 56.68 O
TER

Atoms:
OP1: (48.737,108.522,19.368)
OP2: (49.286,106.070,18.863)
C3': (53.530,108.717,17.680)
C1': (54.926,107.426,19.066)
C5': (51.715,108.988,19.442)
O4': (53.831,107.901,19.833)
C8: (53.558,105.312,18.684)
O2': (55.926,109.271,17.919)
C6: (55.926,102.776,18.166)
C5: (55.106,103.887,18.393)
C4: (55.733,105.095,18.615)
P: (49.647,107.358,19.493)
C4': (53.184,108.989,19.127)
C2': (54.974,108.238,17.775)
C2: (57.726,104.203,18.407)
N1: (57.264,102.969,18.180)
N3: (57.053,105.326,18.635)
N6: (55.458,101.550,17.938)
N7: (53.729,104.036,18.436)
N9: (54.731,106.008,18.803)
O5': (51.106,107.762,18.992)
O3': (53.380,109.877,16.879)
OP1: (59.034,118.131,18.157)
OP2: (60.773,116.629,19.298)
C3': (56.785,114.058,18.680)
C1': (57.617,112.221,17.456)
C5': (57.796,115.739,17.075)
O4': (57.772,113.379,16.660)
C8: (60.046,112.551,18.144)
O2': (55.327,112.209,18.146)
C6: (61.428,109.314,18.280)
C5: (60.734,110.540,18.207)
C4: (59.381,110.477,17.931)
P: (59.900,116.926,18.136)
C4': (57.009,114.468,17.234)
C2': (56.628,112.550,18.577)
C2: (59.411,108.282,17.846)
N1: (60.721,108.183,18.091)
N3: (58.650,109.368,17.745)
N6: (62.736,109.209,18.517)
N7: (61.142,111.860,18.352)
N9: (58.953,111.779,17.849)
O5': (59.010,115.643,17.830)
O3': (55.616,114.686,19.193)
Image (generated by PyMOL):
PyMOL image
show in jmol