Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:0222:0424
Extra
PDB:
ATOM 1 O3' U A 221 49.781 107.664 21.179 1.00 43.72 O
ATOM 2 P A A 222 49.700 107.875 19.596 1.00 44.77 P
ATOM 3 OP1 A A 222 48.838 109.064 19.379 1.00 43.42 O
ATOM 4 OP2 A A 222 49.361 106.593 18.929 1.00 43.79 O
ATOM 5 O5' A A 222 51.195 108.258 19.212 1.00 45.44 O
ATOM 6 C5' A A 222 51.756 109.513 19.644 1.00 45.46 C
ATOM 7 C4' A A 222 53.221 109.564 19.320 1.00 43.96 C
ATOM 8 O4' A A 222 53.903 108.514 20.049 1.00 44.94 O
ATOM 9 C3' A A 222 53.558 109.271 17.875 1.00 45.21 C
ATOM 10 O3' A A 222 53.364 110.415 17.057 1.00 46.73 O
ATOM 11 C2' A A 222 55.006 108.815 17.969 1.00 43.70 C
ATOM 12 O2' A A 222 55.913 109.878 18.137 1.00 45.41 O
ATOM 13 C1' A A 222 54.972 108.006 19.263 1.00 44.48 C
ATOM 14 N9 A A 222 54.746 106.583 19.018 1.00 41.67 N
ATOM 15 C8 A A 222 53.555 105.917 18.882 1.00 41.28 C
ATOM 16 N7 A A 222 53.694 104.639 18.628 1.00 40.96 N
ATOM 17 C5 A A 222 55.066 104.452 18.600 1.00 39.47 C
ATOM 18 C6 A A 222 55.858 103.321 18.364 1.00 40.19 C
ATOM 19 N6 A A 222 55.355 102.120 18.084 1.00 42.77 N
ATOM 20 N1 A A 222 57.200 103.467 18.420 1.00 39.65 N
ATOM 21 C2 A A 222 57.698 104.680 18.685 1.00 38.29 C
ATOM 22 N3 A A 222 57.056 105.821 18.911 1.00 37.52 N
ATOM 23 C4 A A 222 55.726 105.636 18.853 1.00 39.44 C
ATOM 24 P C A 223 53.551 110.293 15.465 1.00 47.56 P
ATOM 25 OP1 C A 223 53.403 111.669 14.931 1.00 47.50 O
ATOM 26 OP2 C A 223 52.704 109.195 14.919 1.00 47.05 O
ATOM 27 O5' C A 223 55.070 109.856 15.339 1.00 44.53 O
TER
ATOM 1 O3' A B 423 60.704 117.562 16.989 1.00 49.48 O
ATOM 2 P A B 424 59.964 117.414 18.399 1.00 49.83 P
ATOM 3 OP1 A B 424 59.164 118.643 18.630 1.00 52.07 O
ATOM 4 OP2 A B 424 60.976 117.001 19.406 1.00 50.28 O
ATOM 5 O5' A B 424 58.977 116.189 18.162 1.00 48.80 O
ATOM 6 C5' A B 424 57.781 116.321 17.374 1.00 44.47 C
ATOM 7 C4' A B 424 56.971 115.053 17.479 1.00 43.53 C
ATOM 8 O4' A B 424 57.714 113.960 16.876 1.00 41.69 O
ATOM 9 C3' A B 424 56.719 114.608 18.911 1.00 42.85 C
ATOM 10 O3' A B 424 55.567 115.269 19.430 1.00 44.86 O
ATOM 11 C2' A B 424 56.555 113.098 18.774 1.00 40.72 C
ATOM 12 O2' A B 424 55.259 112.746 18.345 1.00 39.40 O
ATOM 13 C1' A B 424 57.542 112.784 17.644 1.00 39.89 C
ATOM 14 N9 A B 424 58.870 112.317 18.042 1.00 38.63 N
ATOM 15 C8 A B 424 59.958 113.075 18.398 1.00 37.86 C
ATOM 16 N7 A B 424 61.041 112.372 18.628 1.00 38.38 N
ATOM 17 C5 A B 424 60.637 111.060 18.423 1.00 38.65 C
ATOM 18 C6 A B 424 61.323 109.830 18.499 1.00 38.24 C
ATOM 19 N6 A B 424 62.618 109.717 18.796 1.00 37.29 N
ATOM 20 N1 A B 424 60.621 108.706 18.253 1.00 37.35 N
ATOM 21 C2 A B 424 59.323 108.816 17.948 1.00 37.85 C
ATOM 22 N3 A B 424 58.572 109.907 17.835 1.00 37.23 N
ATOM 23 C4 A B 424 59.295 111.010 18.085 1.00 38.80 C
ATOM 24 P A B 425 55.436 115.537 21.011 1.00 48.78 P
ATOM 25 OP1 A B 425 54.248 116.403 21.208 1.00 47.07 O
ATOM 26 OP2 A B 425 56.744 115.949 21.571 1.00 48.84 O
ATOM 27 O5' A B 425 55.108 114.102 21.610 1.00 50.60 O
TER
ATOM 2 P A A 222 49.700 107.875 19.596 1.00 44.77 P
ATOM 3 OP1 A A 222 48.838 109.064 19.379 1.00 43.42 O
ATOM 4 OP2 A A 222 49.361 106.593 18.929 1.00 43.79 O
ATOM 5 O5' A A 222 51.195 108.258 19.212 1.00 45.44 O
ATOM 6 C5' A A 222 51.756 109.513 19.644 1.00 45.46 C
ATOM 7 C4' A A 222 53.221 109.564 19.320 1.00 43.96 C
ATOM 8 O4' A A 222 53.903 108.514 20.049 1.00 44.94 O
ATOM 9 C3' A A 222 53.558 109.271 17.875 1.00 45.21 C
ATOM 10 O3' A A 222 53.364 110.415 17.057 1.00 46.73 O
ATOM 11 C2' A A 222 55.006 108.815 17.969 1.00 43.70 C
ATOM 12 O2' A A 222 55.913 109.878 18.137 1.00 45.41 O
ATOM 13 C1' A A 222 54.972 108.006 19.263 1.00 44.48 C
ATOM 14 N9 A A 222 54.746 106.583 19.018 1.00 41.67 N
ATOM 15 C8 A A 222 53.555 105.917 18.882 1.00 41.28 C
ATOM 16 N7 A A 222 53.694 104.639 18.628 1.00 40.96 N
ATOM 17 C5 A A 222 55.066 104.452 18.600 1.00 39.47 C
ATOM 18 C6 A A 222 55.858 103.321 18.364 1.00 40.19 C
ATOM 19 N6 A A 222 55.355 102.120 18.084 1.00 42.77 N
ATOM 20 N1 A A 222 57.200 103.467 18.420 1.00 39.65 N
ATOM 21 C2 A A 222 57.698 104.680 18.685 1.00 38.29 C
ATOM 22 N3 A A 222 57.056 105.821 18.911 1.00 37.52 N
ATOM 23 C4 A A 222 55.726 105.636 18.853 1.00 39.44 C
ATOM 24 P C A 223 53.551 110.293 15.465 1.00 47.56 P
ATOM 25 OP1 C A 223 53.403 111.669 14.931 1.00 47.50 O
ATOM 26 OP2 C A 223 52.704 109.195 14.919 1.00 47.05 O
ATOM 27 O5' C A 223 55.070 109.856 15.339 1.00 44.53 O
TER
ATOM 1 O3' A B 423 60.704 117.562 16.989 1.00 49.48 O
ATOM 2 P A B 424 59.964 117.414 18.399 1.00 49.83 P
ATOM 3 OP1 A B 424 59.164 118.643 18.630 1.00 52.07 O
ATOM 4 OP2 A B 424 60.976 117.001 19.406 1.00 50.28 O
ATOM 5 O5' A B 424 58.977 116.189 18.162 1.00 48.80 O
ATOM 6 C5' A B 424 57.781 116.321 17.374 1.00 44.47 C
ATOM 7 C4' A B 424 56.971 115.053 17.479 1.00 43.53 C
ATOM 8 O4' A B 424 57.714 113.960 16.876 1.00 41.69 O
ATOM 9 C3' A B 424 56.719 114.608 18.911 1.00 42.85 C
ATOM 10 O3' A B 424 55.567 115.269 19.430 1.00 44.86 O
ATOM 11 C2' A B 424 56.555 113.098 18.774 1.00 40.72 C
ATOM 12 O2' A B 424 55.259 112.746 18.345 1.00 39.40 O
ATOM 13 C1' A B 424 57.542 112.784 17.644 1.00 39.89 C
ATOM 14 N9 A B 424 58.870 112.317 18.042 1.00 38.63 N
ATOM 15 C8 A B 424 59.958 113.075 18.398 1.00 37.86 C
ATOM 16 N7 A B 424 61.041 112.372 18.628 1.00 38.38 N
ATOM 17 C5 A B 424 60.637 111.060 18.423 1.00 38.65 C
ATOM 18 C6 A B 424 61.323 109.830 18.499 1.00 38.24 C
ATOM 19 N6 A B 424 62.618 109.717 18.796 1.00 37.29 N
ATOM 20 N1 A B 424 60.621 108.706 18.253 1.00 37.35 N
ATOM 21 C2 A B 424 59.323 108.816 17.948 1.00 37.85 C
ATOM 22 N3 A B 424 58.572 109.907 17.835 1.00 37.23 N
ATOM 23 C4 A B 424 59.295 111.010 18.085 1.00 38.80 C
ATOM 24 P A B 425 55.436 115.537 21.011 1.00 48.78 P
ATOM 25 OP1 A B 425 54.248 116.403 21.208 1.00 47.07 O
ATOM 26 OP2 A B 425 56.744 115.949 21.571 1.00 48.84 O
ATOM 27 O5' A B 425 55.108 114.102 21.610 1.00 50.60 O
TER
Atoms:
OP1: (48.838,109.064,19.379)
OP2: (49.361,106.593,18.929)
C3': (53.558,109.271,17.875)
C1': (54.972,108.006,19.263)
C5': (51.756,109.513,19.644)
O4': (53.903,108.514,20.049)
C8: (53.555,105.917,18.882)
O2': (55.913,109.878,18.137)
C6: (55.858,103.321,18.364)
C5: (55.066,104.452,18.600)
C4: (55.726,105.636,18.853)
P: (49.700,107.875,19.596)
C4': (53.221,109.564,19.320)
C2': (55.006,108.815,17.969)
C2: (57.698,104.680,18.685)
N1: (57.200,103.467,18.420)
N3: (57.056,105.821,18.911)
N6: (55.355,102.120,18.084)
N7: (53.694,104.639,18.628)
N9: (54.746,106.583,19.018)
O5': (51.195,108.258,19.212)
O3': (53.364,110.415,17.057)
OP2: (49.361,106.593,18.929)
C3': (53.558,109.271,17.875)
C1': (54.972,108.006,19.263)
C5': (51.756,109.513,19.644)
O4': (53.903,108.514,20.049)
C8: (53.555,105.917,18.882)
O2': (55.913,109.878,18.137)
C6: (55.858,103.321,18.364)
C5: (55.066,104.452,18.600)
C4: (55.726,105.636,18.853)
P: (49.700,107.875,19.596)
C4': (53.221,109.564,19.320)
C2': (55.006,108.815,17.969)
C2: (57.698,104.680,18.685)
N1: (57.200,103.467,18.420)
N3: (57.056,105.821,18.911)
N6: (55.355,102.120,18.084)
N7: (53.694,104.639,18.628)
N9: (54.746,106.583,19.018)
O5': (51.195,108.258,19.212)
O3': (53.364,110.415,17.057)
OP1: (59.164,118.643,18.630)
OP2: (60.976,117.001,19.406)
C3': (56.719,114.608,18.911)
C1': (57.542,112.784,17.644)
C5': (57.781,116.321,17.374)
O4': (57.714,113.960,16.876)
C8: (59.958,113.075,18.398)
O2': (55.259,112.746,18.345)
C6: (61.323,109.830,18.499)
C5: (60.637,111.060,18.423)
C4: (59.295,111.010,18.085)
P: (59.964,117.414,18.399)
C4': (56.971,115.053,17.479)
C2': (56.555,113.098,18.774)
C2: (59.323,108.816,17.948)
N1: (60.621,108.706,18.253)
N3: (58.572,109.907,17.835)
N6: (62.618,109.717,18.796)
N7: (61.041,112.372,18.628)
N9: (58.870,112.317,18.042)
O5': (58.977,116.189,18.162)
O3': (55.567,115.269,19.430)
OP2: (60.976,117.001,19.406)
C3': (56.719,114.608,18.911)
C1': (57.542,112.784,17.644)
C5': (57.781,116.321,17.374)
O4': (57.714,113.960,16.876)
C8: (59.958,113.075,18.398)
O2': (55.259,112.746,18.345)
C6: (61.323,109.830,18.499)
C5: (60.637,111.060,18.423)
C4: (59.295,111.010,18.085)
P: (59.964,117.414,18.399)
C4': (56.971,115.053,17.479)
C2': (56.555,113.098,18.774)
C2: (59.323,108.816,17.948)
N1: (60.621,108.706,18.253)
N3: (58.572,109.907,17.835)
N6: (62.618,109.717,18.796)
N7: (61.041,112.372,18.628)
N9: (58.870,112.317,18.042)
O5': (58.977,116.189,18.162)
O3': (55.567,115.269,19.430)
Image (generated by PyMOL):