ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CME:0222:0424

Extra

PDB:
ATOM 1 O3' U A 221 49.288 106.288 20.367 1.00 41.01 O
ATOM 2 P A A 222 49.087 106.348 18.773 1.00 42.29 P
ATOM 3 OP1 A A 222 48.031 107.374 18.551 1.00 38.18 O
ATOM 4 OP2 A A 222 48.903 104.972 18.239 1.00 43.07 O
ATOM 5 O5' A A 222 50.490 106.873 18.227 1.00 39.23 O
ATOM 6 C5' A A 222 51.013 108.136 18.666 1.00 40.48 C
ATOM 7 C4' A A 222 52.506 108.163 18.510 1.00 41.61 C
ATOM 8 O4' A A 222 53.098 107.086 19.278 1.00 42.76 O
ATOM 9 C3' A A 222 52.986 107.882 17.107 1.00 42.77 C
ATOM 10 O3' A A 222 52.890 109.009 16.279 1.00 45.51 O
ATOM 11 C2' A A 222 54.416 107.420 17.333 1.00 43.08 C
ATOM 12 O2' A A 222 55.335 108.467 17.581 1.00 42.12 O
ATOM 13 C1' A A 222 54.234 106.577 18.592 1.00 42.67 C
ATOM 14 N9 A A 222 53.984 105.176 18.258 1.00 41.64 N
ATOM 15 C8 A A 222 52.784 104.530 18.084 1.00 41.41 C
ATOM 16 N7 A A 222 52.912 103.255 17.813 1.00 41.04 N
ATOM 17 C5 A A 222 54.286 103.052 17.806 1.00 39.89 C
ATOM 18 C6 A A 222 55.076 101.905 17.605 1.00 41.08 C
ATOM 19 N6 A A 222 54.577 100.688 17.365 1.00 42.35 N
ATOM 20 N1 A A 222 56.419 102.050 17.664 1.00 41.02 N
ATOM 21 C2 A A 222 56.921 103.261 17.909 1.00 40.72 C
ATOM 22 N3 A A 222 56.284 104.407 18.121 1.00 41.20 N
ATOM 23 C4 A A 222 54.955 104.229 18.060 1.00 40.21 C
ATOM 24 P C A 223 52.974 108.809 14.700 1.00 48.81 P
ATOM 25 OP1 C A 223 52.387 110.016 14.054 1.00 50.17 O
ATOM 26 OP2 C A 223 52.434 107.456 14.375 1.00 49.49 O
ATOM 27 O5' C A 223 54.537 108.765 14.432 1.00 46.23 O
TER

ATOM 1 O3' A B 423 60.038 116.096 16.095 1.00 39.87 O
ATOM 2 P A B 424 59.235 115.943 17.475 1.00 41.66 P
ATOM 3 OP1 A B 424 58.348 117.134 17.621 1.00 40.73 O
ATOM 4 OP2 A B 424 60.224 115.627 18.540 1.00 41.19 O
ATOM 5 O5' A B 424 58.327 114.658 17.233 1.00 41.22 O
ATOM 6 C5' A B 424 57.162 114.731 16.393 1.00 41.68 C
ATOM 7 C4' A B 424 56.372 113.463 16.515 1.00 42.02 C
ATOM 8 O4' A B 424 57.145 112.382 15.952 1.00 41.83 O
ATOM 9 C3' A B 424 56.104 113.047 17.949 1.00 43.28 C
ATOM 10 O3' A B 424 54.921 113.685 18.427 1.00 45.30 O
ATOM 11 C2' A B 424 55.960 111.534 17.838 1.00 43.09 C
ATOM 12 O2' A B 424 54.670 111.150 17.404 1.00 44.90 O
ATOM 13 C1' A B 424 56.964 111.212 16.728 1.00 40.61 C
ATOM 14 N9 A B 424 58.285 110.736 17.135 1.00 38.20 N
ATOM 15 C8 A B 424 59.393 111.491 17.432 1.00 37.29 C
ATOM 16 N7 A B 424 60.470 110.778 17.668 1.00 35.84 N
ATOM 17 C5 A B 424 60.036 109.467 17.540 1.00 33.15 C
ATOM 18 C6 A B 424 60.702 108.245 17.657 1.00 32.21 C
ATOM 19 N6 A B 424 62.003 108.143 17.934 1.00 29.93 N
ATOM 20 N1 A B 424 59.983 107.116 17.475 1.00 32.65 N
ATOM 21 C2 A B 424 58.681 107.224 17.195 1.00 33.85 C
ATOM 22 N3 A B 424 57.941 108.319 17.055 1.00 35.25 N
ATOM 23 C4 A B 424 58.687 109.423 17.239 1.00 35.43 C
ATOM 24 P A B 425 54.771 114.031 19.989 1.00 49.02 P
ATOM 25 OP1 A B 425 53.566 114.900 20.151 1.00 46.94 O
ATOM 26 OP2 A B 425 56.104 114.488 20.503 1.00 45.14 O
ATOM 27 O5' A B 425 54.426 112.630 20.661 1.00 47.01 O
TER

Atoms:
OP1: (48.031,107.374,18.551)
OP2: (48.903,104.972,18.239)
C3': (52.986,107.882,17.107)
C1': (54.234,106.577,18.592)
C5': (51.013,108.136,18.666)
O4': (53.098,107.086,19.278)
C8: (52.784,104.530,18.084)
O2': (55.335,108.467,17.581)
C6: (55.076,101.905,17.605)
C5: (54.286,103.052,17.806)
C4: (54.955,104.229,18.060)
P: (49.087,106.348,18.773)
C4': (52.506,108.163,18.510)
C2': (54.416,107.420,17.333)
C2: (56.921,103.261,17.909)
N1: (56.419,102.050,17.664)
N3: (56.284,104.407,18.121)
N6: (54.577,100.688,17.365)
N7: (52.912,103.255,17.813)
N9: (53.984,105.176,18.258)
O5': (50.490,106.873,18.227)
O3': (52.890,109.009,16.279)
OP1: (58.348,117.134,17.621)
OP2: (60.224,115.627,18.540)
C3': (56.104,113.047,17.949)
C1': (56.964,111.212,16.728)
C5': (57.162,114.731,16.393)
O4': (57.145,112.382,15.952)
C8: (59.393,111.491,17.432)
O2': (54.670,111.150,17.404)
C6: (60.702,108.245,17.657)
C5: (60.036,109.467,17.540)
C4: (58.687,109.423,17.239)
P: (59.235,115.943,17.475)
C4': (56.372,113.463,16.515)
C2': (55.960,111.534,17.838)
C2: (58.681,107.224,17.195)
N1: (59.983,107.116,17.475)
N3: (57.941,108.319,17.055)
N6: (62.003,108.143,17.934)
N7: (60.470,110.778,17.668)
N9: (58.285,110.736,17.135)
O5': (58.327,114.658,17.233)
O3': (54.921,113.685,18.427)
Image (generated by PyMOL):
PyMOL image
show in jmol