ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CXC:0222:0424

Extra

PDB:
ATOM 1 O3' U A 221 50.161 108.056 21.190 1.00 62.49 O
ATOM 2 P A A 222 50.031 108.268 19.607 1.00 62.83 P
ATOM 3 OP1 A A 222 49.059 109.383 19.411 1.00 60.51 O
ATOM 4 OP2 A A 222 49.807 106.953 18.938 1.00 60.27 O
ATOM 5 O5' A A 222 51.492 108.730 19.190 1.00 61.89 O
ATOM 6 C5' A A 222 52.014 109.978 19.627 1.00 60.74 C
ATOM 7 C4' A A 222 53.487 110.004 19.396 1.00 61.84 C
ATOM 8 O4' A A 222 54.085 108.917 20.148 1.00 62.37 O
ATOM 9 C3' A A 222 53.927 109.745 17.967 1.00 63.35 C
ATOM 10 O3' A A 222 53.877 110.906 17.150 1.00 67.13 O
ATOM 11 C2' A A 222 55.341 109.205 18.148 1.00 62.91 C
ATOM 12 O2' A A 222 56.297 110.232 18.335 1.00 61.59 O
ATOM 13 C1' A A 222 55.192 108.394 19.436 1.00 61.72 C
ATOM 14 N9 A A 222 54.949 106.975 19.169 1.00 59.71 N
ATOM 15 C8 A A 222 53.749 106.328 18.975 1.00 58.12 C
ATOM 16 N7 A A 222 53.880 105.047 18.727 1.00 57.97 N
ATOM 17 C5 A A 222 55.256 104.836 18.769 1.00 57.40 C
ATOM 18 C6 A A 222 56.044 103.688 18.590 1.00 58.00 C
ATOM 19 N6 A A 222 55.536 102.484 18.299 1.00 59.58 N
ATOM 20 N1 A A 222 57.384 103.817 18.711 1.00 57.07 N
ATOM 21 C2 A A 222 57.885 105.023 18.979 1.00 56.20 C
ATOM 22 N3 A A 222 57.253 106.175 19.159 1.00 56.17 N
ATOM 23 C4 A A 222 55.923 106.011 19.043 1.00 58.02 C
ATOM 24 P C A 223 54.020 110.754 15.552 1.00 69.22 P
ATOM 25 OP1 C A 223 53.948 112.117 14.960 1.00 68.30 O
ATOM 26 OP2 C A 223 53.068 109.698 15.086 1.00 68.53 O
ATOM 27 O5' C A 223 55.506 110.208 15.393 1.00 66.90 O
TER

ATOM 1 O3' A B 423 61.038 117.921 16.762 1.00 66.28 O
ATOM 2 P A B 424 60.257 117.790 18.148 1.00 66.26 P
ATOM 3 OP1 A B 424 59.395 119.003 18.317 1.00 65.78 O
ATOM 4 OP2 A B 424 61.279 117.448 19.180 1.00 67.82 O
ATOM 5 O5' A B 424 59.330 116.520 17.913 1.00 64.29 O
ATOM 6 C5' A B 424 58.133 116.621 17.130 1.00 64.53 C
ATOM 7 C4' A B 424 57.296 115.385 17.320 1.00 63.68 C
ATOM 8 O4' A B 424 57.973 114.248 16.720 1.00 64.24 O
ATOM 9 C3' A B 424 57.076 114.985 18.768 1.00 62.76 C
ATOM 10 O3' A B 424 55.961 115.664 19.326 1.00 60.61 O
ATOM 11 C2' A B 424 56.856 113.482 18.676 1.00 62.11 C
ATOM 12 O2' A B 424 55.526 113.209 18.283 1.00 62.28 O
ATOM 13 C1' A B 424 57.797 113.099 17.530 1.00 61.08 C
ATOM 14 N9 A B 424 59.129 112.650 17.935 1.00 58.08 N
ATOM 15 C8 A B 424 60.211 113.434 18.222 1.00 57.25 C
ATOM 16 N7 A B 424 61.295 112.757 18.501 1.00 57.08 N
ATOM 17 C5 A B 424 60.897 111.433 18.404 1.00 54.82 C
ATOM 18 C6 A B 424 61.590 110.211 18.570 1.00 54.13 C
ATOM 19 N6 A B 424 62.883 110.114 18.883 1.00 52.15 N
ATOM 20 N1 A B 424 60.895 109.073 18.397 1.00 53.90 N
ATOM 21 C2 A B 424 59.601 109.158 18.079 1.00 55.39 C
ATOM 22 N3 A B 424 58.846 110.234 17.892 1.00 56.20 N
ATOM 23 C4 A B 424 59.561 111.354 18.070 1.00 55.69 C
ATOM 24 P A B 425 55.917 115.934 20.907 1.00 62.58 P
ATOM 25 OP1 A B 425 54.803 116.878 21.187 1.00 60.82 O
ATOM 26 OP2 A B 425 57.298 116.264 21.356 1.00 61.34 O
ATOM 27 O5' A B 425 55.555 114.513 21.517 1.00 60.85 O
TER

Atoms:
OP1: (49.059,109.383,19.411)
OP2: (49.807,106.953,18.938)
C3': (53.927,109.745,17.967)
C1': (55.192,108.394,19.436)
C5': (52.014,109.978,19.627)
O4': (54.085,108.917,20.148)
C8: (53.749,106.328,18.975)
O2': (56.297,110.232,18.335)
C6: (56.044,103.688,18.590)
C5: (55.256,104.836,18.769)
C4: (55.923,106.011,19.043)
P: (50.031,108.268,19.607)
C4': (53.487,110.004,19.396)
C2': (55.341,109.205,18.148)
C2: (57.885,105.023,18.979)
N1: (57.384,103.817,18.711)
N3: (57.253,106.175,19.159)
N6: (55.536,102.484,18.299)
N7: (53.880,105.047,18.727)
N9: (54.949,106.975,19.169)
O5': (51.492,108.730,19.190)
O3': (53.877,110.906,17.150)
OP1: (59.395,119.003,18.317)
OP2: (61.279,117.448,19.180)
C3': (57.076,114.985,18.768)
C1': (57.797,113.099,17.530)
C5': (58.133,116.621,17.130)
O4': (57.973,114.248,16.720)
C8: (60.211,113.434,18.222)
O2': (55.526,113.209,18.283)
C6: (61.590,110.211,18.570)
C5: (60.897,111.433,18.404)
C4: (59.561,111.354,18.070)
P: (60.257,117.790,18.148)
C4': (57.296,115.385,17.320)
C2': (56.856,113.482,18.676)
C2: (59.601,109.158,18.079)
N1: (60.895,109.073,18.397)
N3: (58.846,110.234,17.892)
N6: (62.883,110.114,18.883)
N7: (61.295,112.757,18.501)
N9: (59.129,112.650,17.935)
O5': (59.330,116.520,17.913)
O3': (55.961,115.664,19.326)
Image (generated by PyMOL):
PyMOL image
show in jmol