ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A1963:A1966

Extra

PDB:
ATOM 1 O3' G A1962 -82.444 -12.641 8.523 1.00 28.72 O
ATOM 2 P A A1963 -83.011 -12.595 10.016 1.00 33.92 P
ATOM 3 OP1 A A1963 -81.981 -13.129 10.926 1.00 52.43 O
ATOM 4 OP2 A A1963 -84.374 -13.169 10.048 1.00 45.10 O
ATOM 5 O5' A A1963 -83.129 -11.027 10.282 1.00 39.11 O
ATOM 6 C5' A A1963 -82.066 -10.351 10.942 1.00 39.19 C
ATOM 7 C4' A A1963 -80.852 -10.261 10.046 1.00 33.17 C
ATOM 8 O4' A A1963 -81.261 -9.743 8.759 1.00 33.21 O
ATOM 9 C3' A A1963 -79.771 -9.323 10.551 1.00 33.26 C
ATOM 10 O3' A A1963 -78.887 -10.015 11.441 1.00 34.40 O
ATOM 11 C2' A A1963 -79.076 -9.011 9.234 1.00 34.98 C
ATOM 12 O2' A A1963 -78.199 -10.034 8.822 1.00 34.59 O
ATOM 13 C1' A A1963 -80.209 -8.970 8.219 1.00 40.21 C
ATOM 14 N9 A A1963 -80.665 -7.617 7.874 1.00 44.32 N
ATOM 15 C8 A A1963 -81.896 -7.069 8.063 1.00 48.84 C
ATOM 16 N7 A A1963 -81.993 -5.835 7.636 1.00 50.25 N
ATOM 17 C5 A A1963 -80.741 -5.553 7.131 1.00 42.99 C
ATOM 18 C6 A A1963 -80.185 -4.408 6.532 1.00 48.78 C
ATOM 19 N6 A A1963 -80.845 -3.264 6.329 1.00 63.79 N
ATOM 20 N1 A A1963 -78.908 -4.471 6.139 1.00 44.02 N
ATOM 21 C2 A A1963 -78.236 -5.596 6.342 1.00 53.55 C
ATOM 22 N3 A A1963 -78.647 -6.727 6.890 1.00 55.58 N
ATOM 23 C4 A A1963 -79.919 -6.637 7.269 1.00 41.49 C
ATOM 24 P A A1964 -78.959 -9.957 13.054 1.00 39.83 P
ATOM 25 OP1 A A1964 -79.100 -11.326 13.608 1.00 44.05 O
ATOM 26 OP2 A A1964 -79.894 -8.901 13.513 1.00 46.84 O
ATOM 27 O5' A A1964 -77.450 -9.472 13.301 1.00 61.07 O
TER

ATOM 1 O3' A B1965 -75.164 -18.193 12.522 1.00 30.60 O
ATOM 2 P A B1966 -75.291 -18.349 10.949 1.00 37.81 P
ATOM 3 OP1 A B1966 -76.247 -19.456 10.740 1.00 42.13 O
ATOM 4 OP2 A B1966 -73.961 -18.388 10.290 1.00 36.91 O
ATOM 5 O5' A B1966 -75.996 -16.957 10.576 1.00 35.20 O
ATOM 6 C5' A B1966 -75.309 -15.714 10.828 1.00 34.43 C
ATOM 7 C4' A B1966 -76.117 -14.465 10.502 1.00 29.24 C
ATOM 8 O4' A B1966 -75.502 -13.320 11.141 1.00 39.58 O
ATOM 9 C3' A B1966 -76.141 -14.073 9.040 1.00 34.95 C
ATOM 10 O3' A B1966 -77.188 -14.741 8.363 1.00 39.98 O
ATOM 11 C2' A B1966 -76.473 -12.593 9.117 1.00 41.00 C
ATOM 12 O2' A B1966 -77.866 -12.393 9.208 1.00 47.62 O
ATOM 13 C1' A B1966 -75.797 -12.150 10.406 1.00 37.56 C
ATOM 14 N9 A B1966 -74.564 -11.413 10.161 1.00 34.12 N
ATOM 15 C8 A B1966 -73.296 -11.858 10.367 1.00 42.09 C
ATOM 16 N7 A B1966 -72.376 -10.984 10.055 1.00 52.55 N
ATOM 17 C5 A B1966 -73.095 -9.886 9.614 1.00 51.72 C
ATOM 18 C6 A B1966 -72.703 -8.620 9.142 1.00 56.14 C
ATOM 19 N6 A B1966 -71.421 -8.264 9.043 1.00 65.95 N
ATOM 20 N1 A B1966 -73.657 -7.746 8.773 1.00 47.43 N
ATOM 21 C2 A B1966 -74.924 -8.126 8.879 1.00 51.78 C
ATOM 22 N3 A B1966 -75.412 -9.289 9.313 1.00 58.58 N
ATOM 23 C4 A B1966 -74.440 -10.136 9.669 1.00 41.84 C
ATOM 24 P G B1967 -77.086 -14.988 6.769 1.00 43.13 P
ATOM 25 OP1 G B1967 -78.116 -16.004 6.414 1.00 42.82 O
ATOM 26 OP2 G B1967 -75.641 -15.229 6.446 1.00 39.38 O
ATOM 27 O5' G B1967 -77.567 -13.586 6.147 1.00 35.19 O
TER

Atoms:
OP1: (-81.981,-13.129,10.926)
OP2: (-84.374,-13.169,10.048)
C3': (-79.771,-9.323,10.551)
C1': (-80.209,-8.970,8.219)
C5': (-82.066,-10.351,10.942)
O4': (-81.261,-9.743,8.759)
C8: (-81.896,-7.069,8.063)
O2': (-78.199,-10.034,8.822)
C6: (-80.185,-4.408,6.532)
C5: (-80.741,-5.553,7.131)
C4: (-79.919,-6.637,7.269)
P: (-83.011,-12.595,10.016)
C4': (-80.852,-10.261,10.046)
C2': (-79.076,-9.011,9.234)
C2: (-78.236,-5.596,6.342)
N1: (-78.908,-4.471,6.139)
N3: (-78.647,-6.727,6.890)
N6: (-80.845,-3.264,6.329)
N7: (-81.993,-5.835,7.636)
N9: (-80.665,-7.617,7.874)
O5': (-83.129,-11.027,10.282)
O3': (-78.887,-10.015,11.441)
OP1: (-76.247,-19.456,10.740)
OP2: (-73.961,-18.388,10.290)
C3': (-76.141,-14.073,9.040)
C1': (-75.797,-12.150,10.406)
C5': (-75.309,-15.714,10.828)
O4': (-75.502,-13.320,11.141)
C8: (-73.296,-11.858,10.367)
O2': (-77.866,-12.393,9.208)
C6: (-72.703,-8.620,9.142)
C5: (-73.095,-9.886,9.614)
C4: (-74.440,-10.136,9.669)
P: (-75.291,-18.349,10.949)
C4': (-76.117,-14.465,10.502)
C2': (-76.473,-12.593,9.117)
C2: (-74.924,-8.126,8.879)
N1: (-73.657,-7.746,8.773)
N3: (-75.412,-9.289,9.313)
N6: (-71.421,-8.264,9.043)
N7: (-72.376,-10.984,10.055)
N9: (-74.564,-11.413,10.161)
O5': (-75.996,-16.957,10.576)
O3': (-77.188,-14.741,8.363)
Image (generated by PyMOL):
PyMOL image
show in jmol