ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G6E:0222:0424

Extra

PDB:
ATOM 1 O3' U A 221 49.792 107.346 20.839 1.00 47.21 O
ATOM 2 P A A 222 49.587 107.516 19.257 1.00 48.46 P
ATOM 3 OP1 A A 222 48.626 108.641 19.098 1.00 45.40 O
ATOM 4 OP2 A A 222 49.288 106.201 18.638 1.00 47.42 O
ATOM 5 O5' A A 222 51.028 107.967 18.748 1.00 46.29 O
ATOM 6 C5' A A 222 51.591 109.222 19.174 1.00 45.68 C
ATOM 7 C4' A A 222 53.068 109.249 18.900 1.00 44.03 C
ATOM 8 O4' A A 222 53.716 108.187 19.643 1.00 43.97 O
ATOM 9 C3' A A 222 53.452 108.965 17.466 1.00 45.71 C
ATOM 10 O3' A A 222 53.289 110.118 16.654 1.00 49.48 O
ATOM 11 C2' A A 222 54.894 108.488 17.603 1.00 43.66 C
ATOM 12 O2' A A 222 55.844 109.521 17.780 1.00 44.05 O
ATOM 13 C1' A A 222 54.805 107.675 18.892 1.00 42.22 C
ATOM 14 N9 A A 222 54.558 106.262 18.634 1.00 39.34 N
ATOM 15 C8 A A 222 53.350 105.627 18.495 1.00 39.98 C
ATOM 16 N7 A A 222 53.455 104.344 18.259 1.00 39.42 N
ATOM 17 C5 A A 222 54.822 104.120 18.241 1.00 35.51 C
ATOM 18 C6 A A 222 55.574 102.969 18.036 1.00 35.60 C
ATOM 19 N6 A A 222 55.030 101.777 17.785 1.00 38.61 N
ATOM 20 N1 A A 222 56.922 103.078 18.088 1.00 35.60 N
ATOM 21 C2 A A 222 57.456 104.281 18.325 1.00 34.91 C
ATOM 22 N3 A A 222 56.848 105.443 18.528 1.00 34.70 N
ATOM 23 C4 A A 222 55.514 105.291 18.474 1.00 36.97 C
ATOM 24 P C A 223 53.527 110.008 15.069 1.00 54.01 P
ATOM 25 OP1 C A 223 53.411 111.399 14.540 1.00 53.29 O
ATOM 26 OP2 C A 223 52.670 108.927 14.497 1.00 52.00 O
ATOM 27 O5' C A 223 55.049 109.547 14.988 1.00 50.63 O
TER

ATOM 1 O3' A B 423 60.589 117.187 16.470 1.00 49.51 O
ATOM 2 P A B 424 59.849 117.120 17.885 1.00 49.92 P
ATOM 3 OP1 A B 424 59.041 118.359 18.027 1.00 51.73 O
ATOM 4 OP2 A B 424 60.867 116.788 18.915 1.00 50.61 O
ATOM 5 O5' A B 424 58.870 115.878 17.719 1.00 50.28 O
ATOM 6 C5' A B 424 57.702 115.952 16.885 1.00 47.56 C
ATOM 7 C4' A B 424 56.911 114.679 17.019 1.00 47.90 C
ATOM 8 O4' A B 424 57.670 113.587 16.448 1.00 46.66 O
ATOM 9 C3' A B 424 56.652 114.264 18.458 1.00 48.38 C
ATOM 10 O3' A B 424 55.486 114.924 18.943 1.00 50.62 O
ATOM 11 C2' A B 424 56.499 112.750 18.353 1.00 46.84 C
ATOM 12 O2' A B 424 55.204 112.378 17.930 1.00 47.50 O
ATOM 13 C1' A B 424 57.490 112.420 17.230 1.00 45.29 C
ATOM 14 N9 A B 424 58.816 111.951 17.625 1.00 44.60 N
ATOM 15 C8 A B 424 59.914 112.711 17.947 1.00 44.63 C
ATOM 16 N7 A B 424 60.998 112.006 18.168 1.00 44.92 N
ATOM 17 C5 A B 424 60.582 110.693 17.998 1.00 43.10 C
ATOM 18 C6 A B 424 61.266 109.462 18.077 1.00 43.52 C
ATOM 19 N6 A B 424 62.570 109.349 18.350 1.00 42.63 N
ATOM 20 N1 A B 424 60.556 108.337 17.857 1.00 42.95 N
ATOM 21 C2 A B 424 59.251 108.448 17.581 1.00 44.91 C
ATOM 22 N3 A B 424 58.500 109.542 17.474 1.00 44.38 N
ATOM 23 C4 A B 424 59.235 110.644 17.691 1.00 44.00 C
ATOM 24 P A B 425 55.358 115.280 20.505 1.00 55.74 P
ATOM 25 OP1 A B 425 54.178 116.167 20.662 1.00 54.09 O
ATOM 26 OP2 A B 425 56.679 115.710 21.036 1.00 54.77 O
ATOM 27 O5' A B 425 54.998 113.885 21.181 1.00 55.89 O
TER

Atoms:
OP1: (48.626,108.641,19.098)
OP2: (49.288,106.201,18.638)
C3': (53.452,108.965,17.466)
C1': (54.805,107.675,18.892)
C5': (51.591,109.222,19.174)
O4': (53.716,108.187,19.643)
C8: (53.350,105.627,18.495)
O2': (55.844,109.521,17.780)
C6: (55.574,102.969,18.036)
C5: (54.822,104.120,18.241)
C4: (55.514,105.291,18.474)
P: (49.587,107.516,19.257)
C4': (53.068,109.249,18.900)
C2': (54.894,108.488,17.603)
C2: (57.456,104.281,18.325)
N1: (56.922,103.078,18.088)
N3: (56.848,105.443,18.528)
N6: (55.030,101.777,17.785)
N7: (53.455,104.344,18.259)
N9: (54.558,106.262,18.634)
O5': (51.028,107.967,18.748)
O3': (53.289,110.118,16.654)
OP1: (59.041,118.359,18.027)
OP2: (60.867,116.788,18.915)
C3': (56.652,114.264,18.458)
C1': (57.490,112.420,17.230)
C5': (57.702,115.952,16.885)
O4': (57.670,113.587,16.448)
C8: (59.914,112.711,17.947)
O2': (55.204,112.378,17.930)
C6: (61.266,109.462,18.077)
C5: (60.582,110.693,17.998)
C4: (59.235,110.644,17.691)
P: (59.849,117.120,17.885)
C4': (56.911,114.679,17.019)
C2': (56.499,112.750,18.353)
C2: (59.251,108.448,17.581)
N1: (60.556,108.337,17.857)
N3: (58.500,109.542,17.474)
N6: (62.570,109.349,18.350)
N7: (60.998,112.006,18.168)
N9: (58.816,111.951,17.625)
O5': (58.870,115.878,17.719)
O3': (55.486,114.924,18.943)
Image (generated by PyMOL):
PyMOL image
show in jmol