ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1993:A2264

Extra

PDB:
ATOM 1 O3' U A1992 89.269 -26.147 -33.881 1.00 26.70 O
ATOM 2 P A A1993 88.602 -27.531 -33.403 1.00 48.67 P
ATOM 3 OP1 A A1993 87.209 -27.558 -33.942 1.00 34.03 O
ATOM 4 OP2 A A1993 88.808 -27.653 -31.922 1.00 21.64 O
ATOM 5 O5' A A1993 89.503 -28.594 -34.157 1.00 34.27 O
ATOM 6 C5' A A1993 90.905 -28.579 -34.002 1.00 24.27 C
ATOM 7 C4' A A1993 91.495 -29.853 -34.496 1.00 21.59 C
ATOM 8 O4' A A1993 90.973 -30.954 -33.720 1.00 27.80 O
ATOM 9 C3' A A1993 91.135 -30.186 -35.910 1.00 28.00 C
ATOM 10 O3' A A1993 91.978 -29.549 -36.830 1.00 28.60 O
ATOM 11 C2' A A1993 91.176 -31.712 -35.961 1.00 30.47 C
ATOM 12 O2' A A1993 92.494 -32.175 -36.189 1.00 29.91 O
ATOM 13 C1' A A1993 90.762 -32.083 -34.532 1.00 31.07 C
ATOM 14 N9 A A1993 89.332 -32.470 -34.413 1.00 33.63 N
ATOM 15 C8 A A1993 88.434 -31.836 -33.580 1.00 27.65 C
ATOM 16 N7 A A1993 87.233 -32.349 -33.622 1.00 26.80 N
ATOM 17 C5 A A1993 87.344 -33.392 -34.531 1.00 26.62 C
ATOM 18 C6 A A1993 86.411 -34.321 -34.995 1.00 27.65 C
ATOM 19 N6 A A1993 85.160 -34.295 -34.558 1.00 37.04 N
ATOM 20 N1 A A1993 86.772 -35.259 -35.891 1.00 24.15 N
ATOM 21 C2 A A1993 88.043 -35.222 -36.280 1.00 31.57 C
ATOM 22 N3 A A1993 89.037 -34.403 -35.909 1.00 31.79 N
ATOM 23 C4 A A1993 88.623 -33.497 -35.012 1.00 30.25 C
ATOM 24 P C A1994 91.328 -28.803 -38.069 1.00 37.05 P
ATOM 25 OP1 C A1994 92.330 -27.880 -38.631 1.00 37.42 O
ATOM 26 OP2 C A1994 90.026 -28.259 -37.585 1.00 35.83 O
ATOM 27 O5' C A1994 91.104 -29.998 -39.066 1.00 28.84 O
TER

ATOM 1 O3' A B2263 95.317 -34.895 -41.966 1.00 34.85 O
ATOM 2 P A B2264 96.306 -35.743 -41.046 1.00 32.40 P
ATOM 3 OP1 A B2264 97.631 -35.110 -41.149 1.00 32.63 O
ATOM 4 OP2 A B2264 96.171 -37.192 -41.436 1.00 24.12 O
ATOM 5 O5' A B2264 95.688 -35.525 -39.584 1.00 36.69 O
ATOM 6 C5' A B2264 95.308 -34.238 -39.110 1.00 28.66 C
ATOM 7 C4' A B2264 94.055 -34.294 -38.244 1.00 29.19 C
ATOM 8 O4' A B2264 92.952 -34.796 -39.026 1.00 33.84 O
ATOM 9 C3' A B2264 94.107 -35.200 -37.013 1.00 36.23 C
ATOM 10 O3' A B2264 94.632 -34.535 -35.865 1.00 36.83 O
ATOM 11 C2' A B2264 92.661 -35.650 -36.829 1.00 32.17 C
ATOM 12 O2' A B2264 91.941 -34.694 -36.066 1.00 35.56 O
ATOM 13 C1' A B2264 92.116 -35.611 -38.248 1.00 33.45 C
ATOM 14 N9 A B2264 92.054 -36.925 -38.889 1.00 34.21 N
ATOM 15 C8 A B2264 93.057 -37.784 -39.163 1.00 34.10 C
ATOM 16 N7 A B2264 92.662 -38.840 -39.824 1.00 31.30 N
ATOM 17 C5 A B2264 91.323 -38.647 -40.030 1.00 29.52 C
ATOM 18 C6 A B2264 90.350 -39.420 -40.679 1.00 35.97 C
ATOM 19 N6 A B2264 90.617 -40.593 -41.269 1.00 37.94 N
ATOM 20 N1 A B2264 89.086 -38.942 -40.698 1.00 35.83 N
ATOM 21 C2 A B2264 88.870 -37.764 -40.109 1.00 37.84 C
ATOM 22 N3 A B2264 89.715 -36.950 -39.468 1.00 37.00 N
ATOM 23 C4 A B2264 90.943 -37.460 -39.470 1.00 32.88 C
ATOM 24 P A B2265 95.700 -35.276 -34.923 1.00 42.94 P
ATOM 25 OP1 A B2265 97.026 -34.663 -35.192 1.00 64.56 O
ATOM 26 OP2 A B2265 95.540 -36.742 -35.140 1.00 34.15 O
ATOM 27 O5' A B2265 95.220 -34.875 -33.472 1.00 26.70 O
TER

Atoms:
OP1: (87.209,-27.558,-33.942)
OP2: (88.808,-27.653,-31.922)
C3': (91.135,-30.186,-35.910)
C1': (90.762,-32.083,-34.532)
C5': (90.905,-28.579,-34.002)
O4': (90.973,-30.954,-33.720)
C8: (88.434,-31.836,-33.580)
O2': (92.494,-32.175,-36.189)
C6: (86.411,-34.321,-34.995)
C5: (87.344,-33.392,-34.531)
C4: (88.623,-33.497,-35.012)
P: (88.602,-27.531,-33.403)
C4': (91.495,-29.853,-34.496)
C2': (91.176,-31.712,-35.961)
C2: (88.043,-35.222,-36.280)
N1: (86.772,-35.259,-35.891)
N3: (89.037,-34.403,-35.909)
N6: (85.160,-34.295,-34.558)
N7: (87.233,-32.349,-33.622)
N9: (89.332,-32.470,-34.413)
O5': (89.503,-28.594,-34.157)
O3': (91.978,-29.549,-36.830)
OP1: (97.631,-35.110,-41.149)
OP2: (96.171,-37.192,-41.436)
C3': (94.107,-35.200,-37.013)
C1': (92.116,-35.611,-38.248)
C5': (95.308,-34.238,-39.110)
O4': (92.952,-34.796,-39.026)
C8: (93.057,-37.784,-39.163)
O2': (91.941,-34.694,-36.066)
C6: (90.350,-39.420,-40.679)
C5: (91.323,-38.647,-40.030)
C4: (90.943,-37.460,-39.470)
P: (96.306,-35.743,-41.046)
C4': (94.055,-34.294,-38.244)
C2': (92.661,-35.650,-36.829)
C2: (88.870,-37.764,-40.109)
N1: (89.086,-38.942,-40.698)
N3: (89.715,-36.950,-39.468)
N6: (90.617,-40.593,-41.269)
N7: (92.662,-38.840,-39.824)
N9: (92.054,-36.925,-38.889)
O5': (95.688,-35.525,-39.584)
O3': (94.632,-34.535,-35.865)
Image (generated by PyMOL):
PyMOL image
show in jmol