ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXB:A62:B81

Extra

PDB:
ATOM 1 O3' G A 61 -20.029 -45.638 5.497 1.00100.53 O
ATOM 2 P A A 62 -18.524 -46.182 5.612 1.00101.14 P
ATOM 3 OP1 A A 62 -17.990 -46.301 4.233 1.00102.82 O
ATOM 4 OP2 A A 62 -18.508 -47.360 6.518 1.00101.26 O
ATOM 5 O5' A A 62 -17.768 -45.003 6.376 1.00 97.38 O
ATOM 6 C5' A A 62 -17.682 -43.716 5.790 1.00 95.38 C
ATOM 7 C4' A A 62 -17.345 -42.714 6.871 1.00 92.34 C
ATOM 8 O4' A A 62 -18.389 -42.723 7.878 1.00 90.91 O
ATOM 9 C3' A A 62 -16.111 -43.036 7.694 1.00 90.78 C
ATOM 10 O3' A A 62 -14.914 -42.756 6.996 1.00 90.35 O
ATOM 11 C2' A A 62 -16.348 -42.104 8.870 1.00 88.68 C
ATOM 12 O2' A A 62 -16.129 -40.747 8.530 1.00 87.86 O
ATOM 13 C1' A A 62 -17.829 -42.366 9.129 1.00 88.72 C
ATOM 14 N9 A A 62 -18.084 -43.417 10.115 1.00 88.15 N
ATOM 15 C8 A A 62 -18.173 -44.763 9.889 1.00 89.15 C
ATOM 16 N7 A A 62 -18.405 -45.471 10.969 1.00 88.86 N
ATOM 17 C5 A A 62 -18.473 -44.528 11.977 1.00 87.17 C
ATOM 18 C6 A A 62 -18.695 -44.635 13.367 1.00 86.17 C
ATOM 19 N6 A A 62 -18.895 -45.796 13.988 1.00 86.97 N
ATOM 20 N1 A A 62 -18.700 -43.500 14.100 1.00 84.83 N
ATOM 21 C2 A A 62 -18.495 -42.330 13.473 1.00 84.50 C
ATOM 22 N3 A A 62 -18.277 -42.104 12.174 1.00 85.09 N
ATOM 23 C4 A A 62 -18.277 -43.253 11.470 1.00 86.73 C
ATOM 24 P A A 63 -13.559 -43.507 7.418 1.00 90.29 P
ATOM 25 OP1 A A 63 -12.587 -43.252 6.332 1.00 91.24 O
ATOM 26 OP2 A A 63 -13.838 -44.904 7.831 1.00 89.92 O
ATOM 27 O5' A A 63 -13.107 -42.688 8.723 1.00 88.57 O
TER

ATOM 1 O3' C B 80 -14.025 -33.611 11.568 1.00 80.05 O
ATOM 2 P A B 81 -15.262 -33.622 10.554 1.00 81.27 P
ATOM 3 OP1 A B 81 -14.700 -33.423 9.198 1.00 81.96 O
ATOM 4 OP2 A B 81 -16.312 -32.689 11.029 1.00 81.76 O
ATOM 5 O5' A B 81 -15.822 -35.110 10.707 1.00 80.35 O
ATOM 6 C5' A B 81 -15.022 -36.218 10.324 1.00 80.29 C
ATOM 7 C4' A B 81 -15.656 -37.511 10.796 1.00 80.44 C
ATOM 8 O4' A B 81 -15.724 -37.523 12.243 1.00 80.86 O
ATOM 9 C3' A B 81 -17.103 -37.717 10.381 1.00 81.01 C
ATOM 10 O3' A B 81 -17.197 -38.177 9.052 1.00 81.81 O
ATOM 11 C2' A B 81 -17.526 -38.768 11.392 1.00 80.46 C
ATOM 12 O2' A B 81 -16.950 -40.028 11.150 1.00 79.25 O
ATOM 13 C1' A B 81 -16.914 -38.179 12.656 1.00 80.73 C
ATOM 14 N9 A B 81 -17.816 -37.249 13.341 1.00 81.54 N
ATOM 15 C8 A B 81 -17.737 -35.886 13.395 1.00 82.36 C
ATOM 16 N7 A B 81 -18.701 -35.320 14.083 1.00 83.01 N
ATOM 17 C5 A B 81 -19.470 -36.387 14.510 1.00 82.89 C
ATOM 18 C6 A B 81 -20.646 -36.469 15.291 1.00 83.49 C
ATOM 19 N6 A B 81 -21.275 -35.404 15.798 1.00 84.37 N
ATOM 20 N1 A B 81 -21.159 -37.696 15.533 1.00 83.11 N
ATOM 21 C2 A B 81 -20.534 -38.768 15.025 1.00 82.22 C
ATOM 22 N3 A B 81 -19.428 -38.815 14.285 1.00 81.56 N
ATOM 23 C4 A B 81 -18.939 -37.583 14.060 1.00 81.88 C
ATOM 24 P G B 82 -18.123 -37.389 8.009 1.00 84.21 P
ATOM 25 OP1 G B 82 -17.539 -37.565 6.661 1.00 84.84 O
ATOM 26 OP2 G B 82 -18.362 -36.018 8.507 1.00 84.99 O
ATOM 27 O5' G B 82 -19.497 -38.204 8.092 1.00 84.72 O
TER

Atoms:
OP1: (-17.990,-46.301,4.233)
OP2: (-18.508,-47.360,6.518)
C3': (-16.111,-43.036,7.694)
C1': (-17.829,-42.366,9.129)
C5': (-17.682,-43.716,5.790)
O4': (-18.389,-42.723,7.878)
C8: (-18.173,-44.763,9.889)
O2': (-16.129,-40.747,8.530)
C6: (-18.695,-44.635,13.367)
C5: (-18.473,-44.528,11.977)
C4: (-18.277,-43.253,11.470)
P: (-18.524,-46.182,5.612)
C4': (-17.345,-42.714,6.871)
C2': (-16.348,-42.104,8.870)
C2: (-18.495,-42.330,13.473)
N1: (-18.700,-43.500,14.100)
N3: (-18.277,-42.104,12.174)
N6: (-18.895,-45.796,13.988)
N7: (-18.405,-45.471,10.969)
N9: (-18.084,-43.417,10.115)
O5': (-17.768,-45.003,6.376)
O3': (-14.914,-42.756,6.996)
OP1: (-14.700,-33.423,9.198)
OP2: (-16.312,-32.689,11.029)
C3': (-17.103,-37.717,10.381)
C1': (-16.914,-38.179,12.656)
C5': (-15.022,-36.218,10.324)
O4': (-15.724,-37.523,12.243)
C8: (-17.737,-35.886,13.395)
O2': (-16.950,-40.028,11.150)
C6: (-20.646,-36.469,15.291)
C5: (-19.470,-36.387,14.510)
C4: (-18.939,-37.583,14.060)
P: (-15.262,-33.622,10.554)
C4': (-15.656,-37.511,10.796)
C2': (-17.526,-38.768,11.392)
C2: (-20.534,-38.768,15.025)
N1: (-21.159,-37.696,15.533)
N3: (-19.428,-38.815,14.285)
N6: (-21.275,-35.404,15.798)
N7: (-18.701,-35.320,14.083)
N9: (-17.816,-37.249,13.341)
O5': (-15.822,-35.110,10.707)
O3': (-17.197,-38.177,9.052)
Image (generated by PyMOL):
PyMOL image
show in jmol