ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXB:A82:B61

Extra

PDB:
ATOM 1 O3' C A 81 -6.261 -32.405 6.991 1.00 88.91 O
ATOM 2 P A A 82 -6.418 -31.189 5.964 1.00 90.01 P
ATOM 3 OP1 A A 82 -7.812 -30.691 6.058 1.00 89.47 O
ATOM 4 OP2 A A 82 -5.879 -31.602 4.646 1.00 91.17 O
ATOM 5 O5' A A 82 -5.401 -30.118 6.573 1.00 89.74 O
ATOM 6 C5' A A 82 -5.700 -29.457 7.790 1.00 89.57 C
ATOM 7 C4' A A 82 -4.620 -28.450 8.115 1.00 90.39 C
ATOM 8 O4' A A 82 -3.373 -29.149 8.334 1.00 90.15 O
ATOM 9 C3' A A 82 -4.296 -27.480 6.994 1.00 92.49 C
ATOM 10 O3' A A 82 -5.197 -26.399 6.995 1.00 93.95 O
ATOM 11 C2' A A 82 -2.883 -27.053 7.361 1.00 92.65 C
ATOM 12 O2' A A 82 -2.844 -26.102 8.404 1.00 92.60 O
ATOM 13 C1' A A 82 -2.298 -28.388 7.812 1.00 91.24 C
ATOM 14 N9 A A 82 -1.677 -29.116 6.707 1.00 91.92 N
ATOM 15 C8 A A 82 -2.192 -30.177 6.013 1.00 92.30 C
ATOM 16 N7 A A 82 -1.409 -30.626 5.061 1.00 93.08 N
ATOM 17 C5 A A 82 -0.304 -29.800 5.132 1.00 93.26 C
ATOM 18 C6 A A 82 0.892 -29.751 4.386 1.00 94.17 C
ATOM 19 N6 A A 82 1.164 -30.596 3.388 1.00 95.05 N
ATOM 20 N1 A A 82 1.796 -28.799 4.709 1.00 94.23 N
ATOM 21 C2 A A 82 1.513 -27.953 5.713 1.00 93.69 C
ATOM 22 N3 A A 82 0.425 -27.900 6.483 1.00 92.79 N
ATOM 23 C4 A A 82 -0.452 -28.860 6.139 1.00 92.63 C
ATOM 24 P G A 83 -5.750 -25.870 5.592 1.00 96.92 P
ATOM 25 OP1 G A 83 -7.085 -25.274 5.839 1.00 96.92 O
ATOM 26 OP2 G A 83 -5.600 -26.935 4.571 1.00 97.06 O
ATOM 27 O5' G A 83 -4.691 -24.727 5.236 1.00 98.77 O
TER

ATOM 1 O3' G B 60 -3.487 -18.173 9.570 1.00108.58 O
ATOM 2 P A B 61 -4.141 -18.246 11.026 1.00106.97 P
ATOM 3 OP1 A B 61 -5.333 -17.362 11.015 1.00107.64 O
ATOM 4 OP2 A B 61 -3.063 -18.053 12.026 1.00106.26 O
ATOM 5 O5' A B 61 -4.623 -19.764 11.124 1.00104.39 O
ATOM 6 C5' A B 61 -5.402 -20.319 10.076 1.00102.65 C
ATOM 7 C4' A B 61 -4.921 -21.719 9.769 1.00100.09 C
ATOM 8 O4' A B 61 -3.581 -21.680 9.227 1.00 99.60 O
ATOM 9 C3' A B 61 -4.720 -22.619 10.973 1.00 98.32 C
ATOM 10 O3' A B 61 -5.958 -23.032 11.536 1.00 97.29 O
ATOM 11 C2' A B 61 -3.939 -23.747 10.308 1.00 97.19 C
ATOM 12 O2' A B 61 -4.739 -24.577 9.483 1.00 97.01 O
ATOM 13 C1' A B 61 -2.972 -22.942 9.448 1.00 97.69 C
ATOM 14 N9 A B 61 -1.650 -22.780 10.057 1.00 96.85 N
ATOM 15 C8 A B 61 -1.202 -21.746 10.833 1.00 97.42 C
ATOM 16 N7 A B 61 0.040 -21.881 11.239 1.00 96.75 N
ATOM 17 C5 A B 61 0.438 -23.091 10.695 1.00 95.79 C
ATOM 18 C6 A B 61 1.650 -23.818 10.746 1.00 94.88 C
ATOM 19 N6 A B 61 2.740 -23.413 11.403 1.00 95.02 N
ATOM 20 N1 A B 61 1.710 -24.997 10.089 1.00 94.08 N
ATOM 21 C2 A B 61 0.629 -25.421 9.418 1.00 94.15 C
ATOM 22 N3 A B 61 -0.560 -24.827 9.297 1.00 94.97 N
ATOM 23 C4 A B 61 -0.593 -23.657 9.963 1.00 95.79 C
ATOM 24 P A B 62 -6.014 -23.501 13.067 1.00 96.04 P
ATOM 25 OP1 A B 62 -7.435 -23.512 13.475 1.00 96.26 O
ATOM 26 OP2 A B 62 -5.038 -22.735 13.874 1.00 96.07 O
ATOM 27 O5' A B 62 -5.469 -24.998 12.966 1.00 94.66 O
TER

Atoms:
OP1: (-7.812,-30.691,6.058)
OP2: (-5.879,-31.602,4.646)
C3': (-4.296,-27.480,6.994)
C1': (-2.298,-28.388,7.812)
C5': (-5.700,-29.457,7.790)
O4': (-3.373,-29.149,8.334)
C8: (-2.192,-30.177,6.013)
O2': (-2.844,-26.102,8.404)
C6: (0.892,-29.751,4.386)
C5: (-0.304,-29.800,5.132)
C4: (-0.452,-28.860,6.139)
P: (-6.418,-31.189,5.964)
C4': (-4.620,-28.450,8.115)
C2': (-2.883,-27.053,7.361)
C2: (1.513,-27.953,5.713)
N1: (1.796,-28.799,4.709)
N3: (0.425,-27.900,6.483)
N6: (1.164,-30.596,3.388)
N7: (-1.409,-30.626,5.061)
N9: (-1.677,-29.116,6.707)
O5': (-5.401,-30.118,6.573)
O3': (-5.197,-26.399,6.995)
OP1: (-5.333,-17.362,11.015)
OP2: (-3.063,-18.053,12.026)
C3': (-4.720,-22.619,10.973)
C1': (-2.972,-22.942,9.448)
C5': (-5.402,-20.319,10.076)
O4': (-3.581,-21.680,9.227)
C8: (-1.202,-21.746,10.833)
O2': (-4.739,-24.577,9.483)
C6: (1.650,-23.818,10.746)
C5: (0.438,-23.091,10.695)
C4: (-0.593,-23.657,9.963)
P: (-4.141,-18.246,11.026)
C4': (-4.921,-21.719,9.769)
C2': (-3.939,-23.747,10.308)
C2: (0.629,-25.421,9.418)
N1: (1.710,-24.997,10.089)
N3: (-0.560,-24.827,9.297)
N6: (2.740,-23.413,11.403)
N7: (0.040,-21.881,11.239)
N9: (-1.650,-22.780,10.057)
O5': (-4.623,-19.764,11.124)
O3': (-5.958,-23.032,11.536)
Image (generated by PyMOL):
PyMOL image
show in jmol