Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:A62:B81
Extra
PDB:
ATOM 1 O3' G A 61 -19.913 -45.597 6.182 1.00 76.49 O
ATOM 2 P A A 62 -18.426 -46.159 6.023 1.00 75.66 P
ATOM 3 OP1 A A 62 -18.180 -46.461 4.595 1.00 76.87 O
ATOM 4 OP2 A A 62 -18.254 -47.207 7.059 1.00 75.41 O
ATOM 5 O5' A A 62 -17.514 -44.916 6.419 1.00 72.75 O
ATOM 6 C5' A A 62 -17.770 -43.632 5.878 1.00 70.25 C
ATOM 7 C4' A A 62 -17.499 -42.622 6.968 1.00 67.19 C
ATOM 8 O4' A A 62 -18.555 -42.692 7.955 1.00 66.05 O
ATOM 9 C3' A A 62 -16.271 -42.907 7.817 1.00 65.52 C
ATOM 10 O3' A A 62 -15.056 -42.591 7.146 1.00 64.75 O
ATOM 11 C2' A A 62 -16.559 -41.999 9.002 1.00 63.88 C
ATOM 12 O2' A A 62 -16.358 -40.636 8.682 1.00 63.57 O
ATOM 13 C1' A A 62 -18.043 -42.287 9.214 1.00 63.92 C
ATOM 14 N9 A A 62 -18.332 -43.301 10.234 1.00 62.70 N
ATOM 15 C8 A A 62 -18.547 -44.638 10.040 1.00 62.94 C
ATOM 16 N7 A A 62 -18.786 -45.304 11.147 1.00 62.28 N
ATOM 17 C5 A A 62 -18.727 -44.341 12.139 1.00 61.05 C
ATOM 18 C6 A A 62 -18.893 -44.400 13.543 1.00 60.11 C
ATOM 19 N6 A A 62 -19.160 -45.526 14.209 1.00 60.28 N
ATOM 20 N1 A A 62 -18.771 -43.253 14.247 1.00 59.11 N
ATOM 21 C2 A A 62 -18.498 -42.119 13.585 1.00 59.28 C
ATOM 22 N3 A A 62 -18.322 -41.941 12.274 1.00 60.09 N
ATOM 23 C4 A A 62 -18.449 -43.099 11.596 1.00 61.23 C
ATOM 24 P A A 63 -13.692 -43.305 7.604 1.00 63.99 P
ATOM 25 OP1 A A 63 -12.697 -43.058 6.533 1.00 64.71 O
ATOM 26 OP2 A A 63 -13.973 -44.697 8.034 1.00 63.74 O
ATOM 27 O5' A A 63 -13.289 -42.478 8.916 1.00 61.38 O
TER
ATOM 1 O3' C B 80 -14.361 -33.311 11.871 1.00 59.02 O
ATOM 2 P A B 81 -15.580 -33.329 10.845 1.00 59.52 P
ATOM 3 OP1 A B 81 -14.999 -33.143 9.495 1.00 59.68 O
ATOM 4 OP2 A B 81 -16.631 -32.396 11.320 1.00 59.46 O
ATOM 5 O5' A B 81 -16.124 -34.824 10.998 1.00 58.92 O
ATOM 6 C5' A B 81 -15.346 -35.912 10.528 1.00 58.49 C
ATOM 7 C4' A B 81 -15.966 -37.228 10.942 1.00 58.45 C
ATOM 8 O4' A B 81 -16.064 -37.278 12.383 1.00 58.53 O
ATOM 9 C3' A B 81 -17.401 -37.444 10.497 1.00 59.24 C
ATOM 10 O3' A B 81 -17.457 -37.864 9.157 1.00 60.42 O
ATOM 11 C2' A B 81 -17.821 -38.546 11.456 1.00 59.10 C
ATOM 12 O2' A B 81 -17.212 -39.786 11.177 1.00 59.06 O
ATOM 13 C1' A B 81 -17.235 -37.995 12.747 1.00 58.42 C
ATOM 14 N9 A B 81 -18.165 -37.132 13.470 1.00 57.80 N
ATOM 15 C8 A B 81 -18.163 -35.767 13.549 1.00 58.01 C
ATOM 16 N7 A B 81 -19.134 -35.272 14.279 1.00 58.25 N
ATOM 17 C5 A B 81 -19.823 -36.392 14.710 1.00 58.34 C
ATOM 18 C6 A B 81 -20.965 -36.564 15.530 1.00 58.54 C
ATOM 19 N6 A B 81 -21.639 -35.555 16.083 1.00 58.54 N
ATOM 20 N1 A B 81 -21.392 -37.825 15.761 1.00 58.51 N
ATOM 21 C2 A B 81 -20.719 -38.845 15.206 1.00 58.41 C
ATOM 22 N3 A B 81 -19.633 -38.809 14.429 1.00 58.03 N
ATOM 23 C4 A B 81 -19.235 -37.544 14.217 1.00 57.83 C
ATOM 24 P G B 82 -18.473 -37.155 8.146 1.00 61.95 P
ATOM 25 OP1 G B 82 -17.922 -37.287 6.776 1.00 62.09 O
ATOM 26 OP2 G B 82 -18.814 -35.810 8.661 1.00 62.50 O
ATOM 27 O5' G B 82 -19.767 -38.072 8.301 1.00 62.16 O
TER
ATOM 2 P A A 62 -18.426 -46.159 6.023 1.00 75.66 P
ATOM 3 OP1 A A 62 -18.180 -46.461 4.595 1.00 76.87 O
ATOM 4 OP2 A A 62 -18.254 -47.207 7.059 1.00 75.41 O
ATOM 5 O5' A A 62 -17.514 -44.916 6.419 1.00 72.75 O
ATOM 6 C5' A A 62 -17.770 -43.632 5.878 1.00 70.25 C
ATOM 7 C4' A A 62 -17.499 -42.622 6.968 1.00 67.19 C
ATOM 8 O4' A A 62 -18.555 -42.692 7.955 1.00 66.05 O
ATOM 9 C3' A A 62 -16.271 -42.907 7.817 1.00 65.52 C
ATOM 10 O3' A A 62 -15.056 -42.591 7.146 1.00 64.75 O
ATOM 11 C2' A A 62 -16.559 -41.999 9.002 1.00 63.88 C
ATOM 12 O2' A A 62 -16.358 -40.636 8.682 1.00 63.57 O
ATOM 13 C1' A A 62 -18.043 -42.287 9.214 1.00 63.92 C
ATOM 14 N9 A A 62 -18.332 -43.301 10.234 1.00 62.70 N
ATOM 15 C8 A A 62 -18.547 -44.638 10.040 1.00 62.94 C
ATOM 16 N7 A A 62 -18.786 -45.304 11.147 1.00 62.28 N
ATOM 17 C5 A A 62 -18.727 -44.341 12.139 1.00 61.05 C
ATOM 18 C6 A A 62 -18.893 -44.400 13.543 1.00 60.11 C
ATOM 19 N6 A A 62 -19.160 -45.526 14.209 1.00 60.28 N
ATOM 20 N1 A A 62 -18.771 -43.253 14.247 1.00 59.11 N
ATOM 21 C2 A A 62 -18.498 -42.119 13.585 1.00 59.28 C
ATOM 22 N3 A A 62 -18.322 -41.941 12.274 1.00 60.09 N
ATOM 23 C4 A A 62 -18.449 -43.099 11.596 1.00 61.23 C
ATOM 24 P A A 63 -13.692 -43.305 7.604 1.00 63.99 P
ATOM 25 OP1 A A 63 -12.697 -43.058 6.533 1.00 64.71 O
ATOM 26 OP2 A A 63 -13.973 -44.697 8.034 1.00 63.74 O
ATOM 27 O5' A A 63 -13.289 -42.478 8.916 1.00 61.38 O
TER
ATOM 1 O3' C B 80 -14.361 -33.311 11.871 1.00 59.02 O
ATOM 2 P A B 81 -15.580 -33.329 10.845 1.00 59.52 P
ATOM 3 OP1 A B 81 -14.999 -33.143 9.495 1.00 59.68 O
ATOM 4 OP2 A B 81 -16.631 -32.396 11.320 1.00 59.46 O
ATOM 5 O5' A B 81 -16.124 -34.824 10.998 1.00 58.92 O
ATOM 6 C5' A B 81 -15.346 -35.912 10.528 1.00 58.49 C
ATOM 7 C4' A B 81 -15.966 -37.228 10.942 1.00 58.45 C
ATOM 8 O4' A B 81 -16.064 -37.278 12.383 1.00 58.53 O
ATOM 9 C3' A B 81 -17.401 -37.444 10.497 1.00 59.24 C
ATOM 10 O3' A B 81 -17.457 -37.864 9.157 1.00 60.42 O
ATOM 11 C2' A B 81 -17.821 -38.546 11.456 1.00 59.10 C
ATOM 12 O2' A B 81 -17.212 -39.786 11.177 1.00 59.06 O
ATOM 13 C1' A B 81 -17.235 -37.995 12.747 1.00 58.42 C
ATOM 14 N9 A B 81 -18.165 -37.132 13.470 1.00 57.80 N
ATOM 15 C8 A B 81 -18.163 -35.767 13.549 1.00 58.01 C
ATOM 16 N7 A B 81 -19.134 -35.272 14.279 1.00 58.25 N
ATOM 17 C5 A B 81 -19.823 -36.392 14.710 1.00 58.34 C
ATOM 18 C6 A B 81 -20.965 -36.564 15.530 1.00 58.54 C
ATOM 19 N6 A B 81 -21.639 -35.555 16.083 1.00 58.54 N
ATOM 20 N1 A B 81 -21.392 -37.825 15.761 1.00 58.51 N
ATOM 21 C2 A B 81 -20.719 -38.845 15.206 1.00 58.41 C
ATOM 22 N3 A B 81 -19.633 -38.809 14.429 1.00 58.03 N
ATOM 23 C4 A B 81 -19.235 -37.544 14.217 1.00 57.83 C
ATOM 24 P G B 82 -18.473 -37.155 8.146 1.00 61.95 P
ATOM 25 OP1 G B 82 -17.922 -37.287 6.776 1.00 62.09 O
ATOM 26 OP2 G B 82 -18.814 -35.810 8.661 1.00 62.50 O
ATOM 27 O5' G B 82 -19.767 -38.072 8.301 1.00 62.16 O
TER
Atoms:
OP1: (-18.180,-46.461,4.595)
OP2: (-18.254,-47.207,7.059)
C3': (-16.271,-42.907,7.817)
C1': (-18.043,-42.287,9.214)
C5': (-17.770,-43.632,5.878)
O4': (-18.555,-42.692,7.955)
C8: (-18.547,-44.638,10.040)
O2': (-16.358,-40.636,8.682)
C6: (-18.893,-44.400,13.543)
C5: (-18.727,-44.341,12.139)
C4: (-18.449,-43.099,11.596)
P: (-18.426,-46.159,6.023)
C4': (-17.499,-42.622,6.968)
C2': (-16.559,-41.999,9.002)
C2: (-18.498,-42.119,13.585)
N1: (-18.771,-43.253,14.247)
N3: (-18.322,-41.941,12.274)
N6: (-19.160,-45.526,14.209)
N7: (-18.786,-45.304,11.147)
N9: (-18.332,-43.301,10.234)
O5': (-17.514,-44.916,6.419)
O3': (-15.056,-42.591,7.146)
OP2: (-18.254,-47.207,7.059)
C3': (-16.271,-42.907,7.817)
C1': (-18.043,-42.287,9.214)
C5': (-17.770,-43.632,5.878)
O4': (-18.555,-42.692,7.955)
C8: (-18.547,-44.638,10.040)
O2': (-16.358,-40.636,8.682)
C6: (-18.893,-44.400,13.543)
C5: (-18.727,-44.341,12.139)
C4: (-18.449,-43.099,11.596)
P: (-18.426,-46.159,6.023)
C4': (-17.499,-42.622,6.968)
C2': (-16.559,-41.999,9.002)
C2: (-18.498,-42.119,13.585)
N1: (-18.771,-43.253,14.247)
N3: (-18.322,-41.941,12.274)
N6: (-19.160,-45.526,14.209)
N7: (-18.786,-45.304,11.147)
N9: (-18.332,-43.301,10.234)
O5': (-17.514,-44.916,6.419)
O3': (-15.056,-42.591,7.146)
OP1: (-14.999,-33.143,9.495)
OP2: (-16.631,-32.396,11.320)
C3': (-17.401,-37.444,10.497)
C1': (-17.235,-37.995,12.747)
C5': (-15.346,-35.912,10.528)
O4': (-16.064,-37.278,12.383)
C8: (-18.163,-35.767,13.549)
O2': (-17.212,-39.786,11.177)
C6: (-20.965,-36.564,15.530)
C5: (-19.823,-36.392,14.710)
C4: (-19.235,-37.544,14.217)
P: (-15.580,-33.329,10.845)
C4': (-15.966,-37.228,10.942)
C2': (-17.821,-38.546,11.456)
C2: (-20.719,-38.845,15.206)
N1: (-21.392,-37.825,15.761)
N3: (-19.633,-38.809,14.429)
N6: (-21.639,-35.555,16.083)
N7: (-19.134,-35.272,14.279)
N9: (-18.165,-37.132,13.470)
O5': (-16.124,-34.824,10.998)
O3': (-17.457,-37.864,9.157)
OP2: (-16.631,-32.396,11.320)
C3': (-17.401,-37.444,10.497)
C1': (-17.235,-37.995,12.747)
C5': (-15.346,-35.912,10.528)
O4': (-16.064,-37.278,12.383)
C8: (-18.163,-35.767,13.549)
O2': (-17.212,-39.786,11.177)
C6: (-20.965,-36.564,15.530)
C5: (-19.823,-36.392,14.710)
C4: (-19.235,-37.544,14.217)
P: (-15.580,-33.329,10.845)
C4': (-15.966,-37.228,10.942)
C2': (-17.821,-38.546,11.456)
C2: (-20.719,-38.845,15.206)
N1: (-21.392,-37.825,15.761)
N3: (-19.633,-38.809,14.429)
N6: (-21.639,-35.555,16.083)
N7: (-19.134,-35.272,14.279)
N9: (-18.165,-37.132,13.470)
O5': (-16.124,-34.824,10.998)
O3': (-17.457,-37.864,9.157)
Image (generated by PyMOL):