Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:A82:B61
Extra
PDB:
ATOM 1 O3' C A 81 -6.514 -32.859 6.651 1.00 67.22 O
ATOM 2 P A A 82 -6.722 -31.669 5.599 1.00 68.57 P
ATOM 3 OP1 A A 82 -8.123 -31.201 5.697 1.00 68.02 O
ATOM 4 OP2 A A 82 -6.180 -32.093 4.285 1.00 68.98 O
ATOM 5 O5' A A 82 -5.747 -30.545 6.183 1.00 68.41 O
ATOM 6 C5' A A 82 -6.048 -29.887 7.405 1.00 68.31 C
ATOM 7 C4' A A 82 -4.913 -28.955 7.771 1.00 68.86 C
ATOM 8 O4' A A 82 -3.700 -29.724 7.961 1.00 68.93 O
ATOM 9 C3' A A 82 -4.530 -27.985 6.672 1.00 70.12 C
ATOM 10 O3' A A 82 -5.411 -26.885 6.641 1.00 70.87 O
ATOM 11 C2' A A 82 -3.110 -27.608 7.073 1.00 70.10 C
ATOM 12 O2' A A 82 -3.044 -26.681 8.135 1.00 70.04 O
ATOM 13 C1' A A 82 -2.581 -28.963 7.530 1.00 69.49 C
ATOM 14 N9 A A 82 -1.867 -29.660 6.460 1.00 70.20 N
ATOM 15 C8 A A 82 -2.274 -30.763 5.760 1.00 70.85 C
ATOM 16 N7 A A 82 -1.417 -31.163 4.846 1.00 71.36 N
ATOM 17 C5 A A 82 -0.376 -30.256 4.950 1.00 71.13 C
ATOM 18 C6 A A 82 0.849 -30.121 4.258 1.00 71.36 C
ATOM 19 N6 A A 82 1.243 -30.945 3.281 1.00 71.57 N
ATOM 20 N1 A A 82 1.662 -29.099 4.611 1.00 71.24 N
ATOM 21 C2 A A 82 1.275 -28.270 5.591 1.00 70.82 C
ATOM 22 N3 A A 82 0.153 -28.296 6.311 1.00 70.47 N
ATOM 23 C4 A A 82 -0.638 -29.321 5.939 1.00 70.64 C
ATOM 24 P G A 83 -5.901 -26.362 5.212 1.00 73.09 P
ATOM 25 OP1 G A 83 -7.214 -25.705 5.388 1.00 73.47 O
ATOM 26 OP2 G A 83 -5.746 -27.448 4.215 1.00 73.20 O
ATOM 27 O5' G A 83 -4.802 -25.257 4.876 1.00 74.78 O
TER
ATOM 1 O3' G B 60 -3.729 -18.531 9.297 1.00 82.54 O
ATOM 2 P A B 61 -4.296 -18.730 10.785 1.00 80.90 P
ATOM 3 OP1 A B 61 -5.488 -17.859 10.924 1.00 81.12 O
ATOM 4 OP2 A B 61 -3.174 -18.619 11.750 1.00 80.31 O
ATOM 5 O5' A B 61 -4.758 -20.258 10.762 1.00 78.29 O
ATOM 6 C5' A B 61 -5.451 -20.773 9.633 1.00 75.54 C
ATOM 7 C4' A B 61 -5.022 -22.199 9.351 1.00 72.85 C
ATOM 8 O4' A B 61 -3.687 -22.231 8.792 1.00 72.03 O
ATOM 9 C3' A B 61 -4.841 -23.089 10.566 1.00 71.22 C
ATOM 10 O3' A B 61 -6.077 -23.450 11.140 1.00 69.84 O
ATOM 11 C2' A B 61 -4.132 -24.261 9.908 1.00 70.58 C
ATOM 12 O2' A B 61 -4.994 -25.053 9.110 1.00 70.37 O
ATOM 13 C1' A B 61 -3.127 -23.509 9.041 1.00 70.60 C
ATOM 14 N9 A B 61 -1.820 -23.378 9.684 1.00 69.81 N
ATOM 15 C8 A B 61 -1.380 -22.359 10.485 1.00 70.08 C
ATOM 16 N7 A B 61 -0.155 -22.521 10.930 1.00 69.68 N
ATOM 17 C5 A B 61 0.238 -23.731 10.385 1.00 68.83 C
ATOM 18 C6 A B 61 1.435 -24.473 10.471 1.00 68.31 C
ATOM 19 N6 A B 61 2.501 -24.078 11.174 1.00 68.57 N
ATOM 20 N1 A B 61 1.500 -25.648 9.808 1.00 67.92 N
ATOM 21 C2 A B 61 0.436 -26.051 9.098 1.00 68.10 C
ATOM 22 N3 A B 61 -0.740 -25.438 8.942 1.00 68.40 N
ATOM 23 C4 A B 61 -0.777 -24.274 9.616 1.00 68.88 C
ATOM 24 P A B 62 -6.149 -23.747 12.711 1.00 68.12 P
ATOM 25 OP1 A B 62 -7.567 -23.596 13.109 1.00 68.45 O
ATOM 26 OP2 A B 62 -5.102 -22.977 13.419 1.00 67.86 O
ATOM 27 O5' A B 62 -5.726 -25.286 12.780 1.00 66.82 O
TER
ATOM 2 P A A 82 -6.722 -31.669 5.599 1.00 68.57 P
ATOM 3 OP1 A A 82 -8.123 -31.201 5.697 1.00 68.02 O
ATOM 4 OP2 A A 82 -6.180 -32.093 4.285 1.00 68.98 O
ATOM 5 O5' A A 82 -5.747 -30.545 6.183 1.00 68.41 O
ATOM 6 C5' A A 82 -6.048 -29.887 7.405 1.00 68.31 C
ATOM 7 C4' A A 82 -4.913 -28.955 7.771 1.00 68.86 C
ATOM 8 O4' A A 82 -3.700 -29.724 7.961 1.00 68.93 O
ATOM 9 C3' A A 82 -4.530 -27.985 6.672 1.00 70.12 C
ATOM 10 O3' A A 82 -5.411 -26.885 6.641 1.00 70.87 O
ATOM 11 C2' A A 82 -3.110 -27.608 7.073 1.00 70.10 C
ATOM 12 O2' A A 82 -3.044 -26.681 8.135 1.00 70.04 O
ATOM 13 C1' A A 82 -2.581 -28.963 7.530 1.00 69.49 C
ATOM 14 N9 A A 82 -1.867 -29.660 6.460 1.00 70.20 N
ATOM 15 C8 A A 82 -2.274 -30.763 5.760 1.00 70.85 C
ATOM 16 N7 A A 82 -1.417 -31.163 4.846 1.00 71.36 N
ATOM 17 C5 A A 82 -0.376 -30.256 4.950 1.00 71.13 C
ATOM 18 C6 A A 82 0.849 -30.121 4.258 1.00 71.36 C
ATOM 19 N6 A A 82 1.243 -30.945 3.281 1.00 71.57 N
ATOM 20 N1 A A 82 1.662 -29.099 4.611 1.00 71.24 N
ATOM 21 C2 A A 82 1.275 -28.270 5.591 1.00 70.82 C
ATOM 22 N3 A A 82 0.153 -28.296 6.311 1.00 70.47 N
ATOM 23 C4 A A 82 -0.638 -29.321 5.939 1.00 70.64 C
ATOM 24 P G A 83 -5.901 -26.362 5.212 1.00 73.09 P
ATOM 25 OP1 G A 83 -7.214 -25.705 5.388 1.00 73.47 O
ATOM 26 OP2 G A 83 -5.746 -27.448 4.215 1.00 73.20 O
ATOM 27 O5' G A 83 -4.802 -25.257 4.876 1.00 74.78 O
TER
ATOM 1 O3' G B 60 -3.729 -18.531 9.297 1.00 82.54 O
ATOM 2 P A B 61 -4.296 -18.730 10.785 1.00 80.90 P
ATOM 3 OP1 A B 61 -5.488 -17.859 10.924 1.00 81.12 O
ATOM 4 OP2 A B 61 -3.174 -18.619 11.750 1.00 80.31 O
ATOM 5 O5' A B 61 -4.758 -20.258 10.762 1.00 78.29 O
ATOM 6 C5' A B 61 -5.451 -20.773 9.633 1.00 75.54 C
ATOM 7 C4' A B 61 -5.022 -22.199 9.351 1.00 72.85 C
ATOM 8 O4' A B 61 -3.687 -22.231 8.792 1.00 72.03 O
ATOM 9 C3' A B 61 -4.841 -23.089 10.566 1.00 71.22 C
ATOM 10 O3' A B 61 -6.077 -23.450 11.140 1.00 69.84 O
ATOM 11 C2' A B 61 -4.132 -24.261 9.908 1.00 70.58 C
ATOM 12 O2' A B 61 -4.994 -25.053 9.110 1.00 70.37 O
ATOM 13 C1' A B 61 -3.127 -23.509 9.041 1.00 70.60 C
ATOM 14 N9 A B 61 -1.820 -23.378 9.684 1.00 69.81 N
ATOM 15 C8 A B 61 -1.380 -22.359 10.485 1.00 70.08 C
ATOM 16 N7 A B 61 -0.155 -22.521 10.930 1.00 69.68 N
ATOM 17 C5 A B 61 0.238 -23.731 10.385 1.00 68.83 C
ATOM 18 C6 A B 61 1.435 -24.473 10.471 1.00 68.31 C
ATOM 19 N6 A B 61 2.501 -24.078 11.174 1.00 68.57 N
ATOM 20 N1 A B 61 1.500 -25.648 9.808 1.00 67.92 N
ATOM 21 C2 A B 61 0.436 -26.051 9.098 1.00 68.10 C
ATOM 22 N3 A B 61 -0.740 -25.438 8.942 1.00 68.40 N
ATOM 23 C4 A B 61 -0.777 -24.274 9.616 1.00 68.88 C
ATOM 24 P A B 62 -6.149 -23.747 12.711 1.00 68.12 P
ATOM 25 OP1 A B 62 -7.567 -23.596 13.109 1.00 68.45 O
ATOM 26 OP2 A B 62 -5.102 -22.977 13.419 1.00 67.86 O
ATOM 27 O5' A B 62 -5.726 -25.286 12.780 1.00 66.82 O
TER
Atoms:
OP1: (-8.123,-31.201,5.697)
OP2: (-6.180,-32.093,4.285)
C3': (-4.530,-27.985,6.672)
C1': (-2.581,-28.963,7.530)
C5': (-6.048,-29.887,7.405)
O4': (-3.700,-29.724,7.961)
C8: (-2.274,-30.763,5.760)
O2': (-3.044,-26.681,8.135)
C6: (0.849,-30.121,4.258)
C5: (-0.376,-30.256,4.950)
C4: (-0.638,-29.321,5.939)
P: (-6.722,-31.669,5.599)
C4': (-4.913,-28.955,7.771)
C2': (-3.110,-27.608,7.073)
C2: (1.275,-28.270,5.591)
N1: (1.662,-29.099,4.611)
N3: (0.153,-28.296,6.311)
N6: (1.243,-30.945,3.281)
N7: (-1.417,-31.163,4.846)
N9: (-1.867,-29.660,6.460)
O5': (-5.747,-30.545,6.183)
O3': (-5.411,-26.885,6.641)
OP2: (-6.180,-32.093,4.285)
C3': (-4.530,-27.985,6.672)
C1': (-2.581,-28.963,7.530)
C5': (-6.048,-29.887,7.405)
O4': (-3.700,-29.724,7.961)
C8: (-2.274,-30.763,5.760)
O2': (-3.044,-26.681,8.135)
C6: (0.849,-30.121,4.258)
C5: (-0.376,-30.256,4.950)
C4: (-0.638,-29.321,5.939)
P: (-6.722,-31.669,5.599)
C4': (-4.913,-28.955,7.771)
C2': (-3.110,-27.608,7.073)
C2: (1.275,-28.270,5.591)
N1: (1.662,-29.099,4.611)
N3: (0.153,-28.296,6.311)
N6: (1.243,-30.945,3.281)
N7: (-1.417,-31.163,4.846)
N9: (-1.867,-29.660,6.460)
O5': (-5.747,-30.545,6.183)
O3': (-5.411,-26.885,6.641)
OP1: (-5.488,-17.859,10.924)
OP2: (-3.174,-18.619,11.750)
C3': (-4.841,-23.089,10.566)
C1': (-3.127,-23.509,9.041)
C5': (-5.451,-20.773,9.633)
O4': (-3.687,-22.231,8.792)
C8: (-1.380,-22.359,10.485)
O2': (-4.994,-25.053,9.110)
C6: (1.435,-24.473,10.471)
C5: (0.238,-23.731,10.385)
C4: (-0.777,-24.274,9.616)
P: (-4.296,-18.730,10.785)
C4': (-5.022,-22.199,9.351)
C2': (-4.132,-24.261,9.908)
C2: (0.436,-26.051,9.098)
N1: (1.500,-25.648,9.808)
N3: (-0.740,-25.438,8.942)
N6: (2.501,-24.078,11.174)
N7: (-0.155,-22.521,10.930)
N9: (-1.820,-23.378,9.684)
O5': (-4.758,-20.258,10.762)
O3': (-6.077,-23.450,11.140)
OP2: (-3.174,-18.619,11.750)
C3': (-4.841,-23.089,10.566)
C1': (-3.127,-23.509,9.041)
C5': (-5.451,-20.773,9.633)
O4': (-3.687,-22.231,8.792)
C8: (-1.380,-22.359,10.485)
O2': (-4.994,-25.053,9.110)
C6: (1.435,-24.473,10.471)
C5: (0.238,-23.731,10.385)
C4: (-0.777,-24.274,9.616)
P: (-4.296,-18.730,10.785)
C4': (-5.022,-22.199,9.351)
C2': (-4.132,-24.261,9.908)
C2: (0.436,-26.051,9.098)
N1: (1.500,-25.648,9.808)
N3: (-0.740,-25.438,8.942)
N6: (2.501,-24.078,11.174)
N7: (-0.155,-22.521,10.930)
N9: (-1.820,-23.378,9.684)
O5': (-4.758,-20.258,10.762)
O3': (-6.077,-23.450,11.140)
Image (generated by PyMOL):