Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01057:01217
Extra
PDB:
ATOM 1 O3' A A1056 21.723 91.698 110.681 1.00 34.72 O
ATOM 2 P A A1057 22.332 92.018 112.129 1.00 34.44 P
ATOM 3 OP1 A A1057 22.933 90.763 112.627 1.00 32.21 O
ATOM 4 OP2 A A1057 21.301 92.713 112.938 1.00 33.51 O
ATOM 5 O5' A A1057 23.506 93.051 111.841 1.00 35.09 O
ATOM 6 C5' A A1057 24.720 92.629 111.182 1.00 35.23 C
ATOM 7 C4' A A1057 25.552 93.831 110.810 1.00 33.32 C
ATOM 8 O4' A A1057 24.813 94.639 109.860 1.00 32.89 O
ATOM 9 C3' A A1057 25.849 94.791 111.950 1.00 33.88 C
ATOM 10 O3' A A1057 26.967 94.380 112.715 1.00 35.59 O
ATOM 11 C2' A A1057 26.122 96.095 111.219 1.00 33.00 C
ATOM 12 O2' A A1057 27.441 96.176 110.722 1.00 33.47 O
ATOM 13 C1' A A1057 25.112 96.010 110.069 1.00 33.07 C
ATOM 14 N9 A A1057 23.869 96.722 110.362 1.00 31.72 N
ATOM 15 C8 A A1057 22.794 96.293 111.101 1.00 33.01 C
ATOM 16 N7 A A1057 21.848 97.194 111.232 1.00 33.01 N
ATOM 17 C5 A A1057 22.324 98.283 110.517 1.00 32.20 C
ATOM 18 C6 A A1057 21.796 99.567 110.277 1.00 31.82 C
ATOM 19 N6 A A1057 20.624 99.987 110.745 1.00 30.83 N
ATOM 20 N1 A A1057 22.531 100.417 109.526 1.00 31.96 N
ATOM 21 C2 A A1057 23.709 99.996 109.051 1.00 30.26 C
ATOM 22 N3 A A1057 24.311 98.820 109.207 1.00 29.57 N
ATOM 23 C4 A A1057 23.562 98.000 109.962 1.00 32.21 C
ATOM 24 P G A1058 26.968 94.591 114.308 1.00 38.48 P
ATOM 25 OP1 G A1058 28.386 94.471 114.732 1.00 36.97 O
ATOM 26 OP2 G A1058 25.960 93.675 114.890 1.00 39.83 O
ATOM 27 O5' G A1058 26.497 96.103 114.516 1.00 33.40 O
TER
ATOM 1 O3' C B1216 12.776 104.238 112.941 1.00 39.30 O
ATOM 2 P G B1217 12.807 104.014 111.355 1.00 39.31 P
ATOM 3 OP1 G B1217 12.553 105.344 110.756 1.00 37.91 O
ATOM 4 OP2 G B1217 11.940 102.858 111.000 1.00 37.82 O
ATOM 5 O5' G B1217 14.311 103.597 111.049 1.00 41.55 O
ATOM 6 C5' G B1217 15.400 104.526 111.227 1.00 40.39 C
ATOM 7 C4' G B1217 16.710 103.828 110.957 1.00 40.75 C
ATOM 8 O4' G B1217 16.886 102.759 111.922 1.00 41.21 O
ATOM 9 C3' G B1217 16.767 103.144 109.601 1.00 40.21 C
ATOM 10 O3' G B1217 17.177 104.073 108.601 1.00 38.88 O
ATOM 11 C2' G B1217 17.757 102.008 109.834 1.00 40.26 C
ATOM 12 O2' G B1217 19.104 102.427 109.766 1.00 40.79 O
ATOM 13 C1' G B1217 17.434 101.619 111.281 1.00 40.81 C
ATOM 14 N9 G B1217 16.484 100.522 111.430 1.00 40.79 N
ATOM 15 C8 G B1217 15.112 100.613 111.444 1.00 40.50 C
ATOM 16 N7 G B1217 14.525 99.463 111.625 1.00 39.94 N
ATOM 17 C5 G B1217 15.567 98.555 111.732 1.00 40.01 C
ATOM 18 C6 G B1217 15.545 97.155 111.945 1.00 41.04 C
ATOM 19 O6 G B1217 14.566 96.414 112.095 1.00 45.38 O
ATOM 20 N1 G B1217 16.829 96.621 111.985 1.00 40.64 N
ATOM 21 C2 G B1217 17.989 97.343 111.846 1.00 39.81 C
ATOM 22 N2 G B1217 19.131 96.648 111.931 1.00 36.47 N
ATOM 23 N3 G B1217 18.024 98.653 111.646 1.00 40.89 N
ATOM 24 C4 G B1217 16.785 99.190 111.603 1.00 41.16 C
ATOM 25 P A B1218 16.560 103.982 107.121 1.00 41.84 P
ATOM 26 OP1 A B1218 16.779 105.297 106.461 1.00 39.18 O
ATOM 27 OP2 A B1218 15.182 103.412 107.178 1.00 42.54 O
ATOM 28 O5' A B1218 17.484 102.904 106.409 1.00 38.90 O
TER
ATOM 2 P A A1057 22.332 92.018 112.129 1.00 34.44 P
ATOM 3 OP1 A A1057 22.933 90.763 112.627 1.00 32.21 O
ATOM 4 OP2 A A1057 21.301 92.713 112.938 1.00 33.51 O
ATOM 5 O5' A A1057 23.506 93.051 111.841 1.00 35.09 O
ATOM 6 C5' A A1057 24.720 92.629 111.182 1.00 35.23 C
ATOM 7 C4' A A1057 25.552 93.831 110.810 1.00 33.32 C
ATOM 8 O4' A A1057 24.813 94.639 109.860 1.00 32.89 O
ATOM 9 C3' A A1057 25.849 94.791 111.950 1.00 33.88 C
ATOM 10 O3' A A1057 26.967 94.380 112.715 1.00 35.59 O
ATOM 11 C2' A A1057 26.122 96.095 111.219 1.00 33.00 C
ATOM 12 O2' A A1057 27.441 96.176 110.722 1.00 33.47 O
ATOM 13 C1' A A1057 25.112 96.010 110.069 1.00 33.07 C
ATOM 14 N9 A A1057 23.869 96.722 110.362 1.00 31.72 N
ATOM 15 C8 A A1057 22.794 96.293 111.101 1.00 33.01 C
ATOM 16 N7 A A1057 21.848 97.194 111.232 1.00 33.01 N
ATOM 17 C5 A A1057 22.324 98.283 110.517 1.00 32.20 C
ATOM 18 C6 A A1057 21.796 99.567 110.277 1.00 31.82 C
ATOM 19 N6 A A1057 20.624 99.987 110.745 1.00 30.83 N
ATOM 20 N1 A A1057 22.531 100.417 109.526 1.00 31.96 N
ATOM 21 C2 A A1057 23.709 99.996 109.051 1.00 30.26 C
ATOM 22 N3 A A1057 24.311 98.820 109.207 1.00 29.57 N
ATOM 23 C4 A A1057 23.562 98.000 109.962 1.00 32.21 C
ATOM 24 P G A1058 26.968 94.591 114.308 1.00 38.48 P
ATOM 25 OP1 G A1058 28.386 94.471 114.732 1.00 36.97 O
ATOM 26 OP2 G A1058 25.960 93.675 114.890 1.00 39.83 O
ATOM 27 O5' G A1058 26.497 96.103 114.516 1.00 33.40 O
TER
ATOM 1 O3' C B1216 12.776 104.238 112.941 1.00 39.30 O
ATOM 2 P G B1217 12.807 104.014 111.355 1.00 39.31 P
ATOM 3 OP1 G B1217 12.553 105.344 110.756 1.00 37.91 O
ATOM 4 OP2 G B1217 11.940 102.858 111.000 1.00 37.82 O
ATOM 5 O5' G B1217 14.311 103.597 111.049 1.00 41.55 O
ATOM 6 C5' G B1217 15.400 104.526 111.227 1.00 40.39 C
ATOM 7 C4' G B1217 16.710 103.828 110.957 1.00 40.75 C
ATOM 8 O4' G B1217 16.886 102.759 111.922 1.00 41.21 O
ATOM 9 C3' G B1217 16.767 103.144 109.601 1.00 40.21 C
ATOM 10 O3' G B1217 17.177 104.073 108.601 1.00 38.88 O
ATOM 11 C2' G B1217 17.757 102.008 109.834 1.00 40.26 C
ATOM 12 O2' G B1217 19.104 102.427 109.766 1.00 40.79 O
ATOM 13 C1' G B1217 17.434 101.619 111.281 1.00 40.81 C
ATOM 14 N9 G B1217 16.484 100.522 111.430 1.00 40.79 N
ATOM 15 C8 G B1217 15.112 100.613 111.444 1.00 40.50 C
ATOM 16 N7 G B1217 14.525 99.463 111.625 1.00 39.94 N
ATOM 17 C5 G B1217 15.567 98.555 111.732 1.00 40.01 C
ATOM 18 C6 G B1217 15.545 97.155 111.945 1.00 41.04 C
ATOM 19 O6 G B1217 14.566 96.414 112.095 1.00 45.38 O
ATOM 20 N1 G B1217 16.829 96.621 111.985 1.00 40.64 N
ATOM 21 C2 G B1217 17.989 97.343 111.846 1.00 39.81 C
ATOM 22 N2 G B1217 19.131 96.648 111.931 1.00 36.47 N
ATOM 23 N3 G B1217 18.024 98.653 111.646 1.00 40.89 N
ATOM 24 C4 G B1217 16.785 99.190 111.603 1.00 41.16 C
ATOM 25 P A B1218 16.560 103.982 107.121 1.00 41.84 P
ATOM 26 OP1 A B1218 16.779 105.297 106.461 1.00 39.18 O
ATOM 27 OP2 A B1218 15.182 103.412 107.178 1.00 42.54 O
ATOM 28 O5' A B1218 17.484 102.904 106.409 1.00 38.90 O
TER
Atoms:
OP1: (22.933,90.763,112.627)
OP2: (21.301,92.713,112.938)
C3': (25.849,94.791,111.950)
C1': (25.112,96.010,110.069)
C5': (24.720,92.629,111.182)
O4': (24.813,94.639,109.860)
C8: (22.794,96.293,111.101)
O2': (27.441,96.176,110.722)
C6: (21.796,99.567,110.277)
C5: (22.324,98.283,110.517)
C4: (23.562,98.000,109.962)
P: (22.332,92.018,112.129)
C4': (25.552,93.831,110.810)
C2': (26.122,96.095,111.219)
C2: (23.709,99.996,109.051)
N1: (22.531,100.417,109.526)
N3: (24.311,98.820,109.207)
N6: (20.624,99.987,110.745)
N7: (21.848,97.194,111.232)
N9: (23.869,96.722,110.362)
O5': (23.506,93.051,111.841)
O3': (26.967,94.380,112.715)
OP2: (21.301,92.713,112.938)
C3': (25.849,94.791,111.950)
C1': (25.112,96.010,110.069)
C5': (24.720,92.629,111.182)
O4': (24.813,94.639,109.860)
C8: (22.794,96.293,111.101)
O2': (27.441,96.176,110.722)
C6: (21.796,99.567,110.277)
C5: (22.324,98.283,110.517)
C4: (23.562,98.000,109.962)
P: (22.332,92.018,112.129)
C4': (25.552,93.831,110.810)
C2': (26.122,96.095,111.219)
C2: (23.709,99.996,109.051)
N1: (22.531,100.417,109.526)
N3: (24.311,98.820,109.207)
N6: (20.624,99.987,110.745)
N7: (21.848,97.194,111.232)
N9: (23.869,96.722,110.362)
O5': (23.506,93.051,111.841)
O3': (26.967,94.380,112.715)
OP1: (12.553,105.344,110.756)
OP2: (11.940,102.858,111.000)
C3': (16.767,103.144,109.601)
C1': (17.434,101.619,111.281)
C5': (15.400,104.526,111.227)
O6: (14.566,96.414,112.095)
O4': (16.886,102.759,111.922)
C8: (15.112,100.613,111.444)
C2: (17.989,97.343,111.846)
C6: (15.545,97.155,111.945)
C5: (15.567,98.555,111.732)
C4: (16.785,99.190,111.603)
P: (12.807,104.014,111.355)
C4': (16.710,103.828,110.957)
C2': (17.757,102.008,109.834)
O2': (19.104,102.427,109.766)
N1: (16.829,96.621,111.985)
N2: (19.131,96.648,111.931)
N3: (18.024,98.653,111.646)
N7: (14.525,99.463,111.625)
N9: (16.484,100.522,111.430)
O5': (14.311,103.597,111.049)
O3': (17.177,104.073,108.601)
OP2: (11.940,102.858,111.000)
C3': (16.767,103.144,109.601)
C1': (17.434,101.619,111.281)
C5': (15.400,104.526,111.227)
O6: (14.566,96.414,112.095)
O4': (16.886,102.759,111.922)
C8: (15.112,100.613,111.444)
C2: (17.989,97.343,111.846)
C6: (15.545,97.155,111.945)
C5: (15.567,98.555,111.732)
C4: (16.785,99.190,111.603)
P: (12.807,104.014,111.355)
C4': (16.710,103.828,110.957)
C2': (17.757,102.008,109.834)
O2': (19.104,102.427,109.766)
N1: (16.829,96.621,111.985)
N2: (19.131,96.648,111.931)
N3: (18.024,98.653,111.646)
N7: (14.525,99.463,111.625)
N9: (16.484,100.522,111.430)
O5': (14.311,103.597,111.049)
O3': (17.177,104.073,108.601)
Image (generated by PyMOL):