Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A18:A22
Extra
PDB:
ATOM 1 O3' G A 17 2.211 -12.533 -41.269 1.00 57.05 O
ATOM 2 P A A 18 2.031 -10.978 -41.641 1.00 66.87 P
ATOM 3 OP1 A A 18 0.709 -10.838 -42.297 1.00 64.81 O
ATOM 4 OP2 A A 18 3.242 -10.564 -42.387 1.00 63.80 O
ATOM 5 O5' A A 18 2.004 -10.272 -40.213 1.00 61.20 O
ATOM 6 C5' A A 18 1.050 -10.655 -39.233 1.00 59.72 C
ATOM 7 C4' A A 18 1.104 -9.764 -38.018 1.00 59.56 C
ATOM 8 O4' A A 18 2.287 -10.058 -37.236 1.00 61.82 O
ATOM 9 C3' A A 18 1.203 -8.272 -38.281 1.00 57.96 C
ATOM 10 O3' A A 18 -0.041 -7.687 -38.624 1.00 56.13 O
ATOM 11 C2' A A 18 1.784 -7.746 -36.973 1.00 58.78 C
ATOM 12 O2' A A 18 0.772 -7.625 -35.985 1.00 56.63 O
ATOM 13 C1' A A 18 2.720 -8.889 -36.570 1.00 57.92 C
ATOM 14 N9 A A 18 4.120 -8.616 -36.943 1.00 52.07 N
ATOM 15 C8 A A 18 4.860 -9.151 -37.967 1.00 54.04 C
ATOM 16 N7 A A 18 6.087 -8.690 -38.022 1.00 55.42 N
ATOM 17 C5 A A 18 6.156 -7.792 -36.964 1.00 49.43 C
ATOM 18 C6 A A 18 7.187 -6.966 -36.479 1.00 48.79 C
ATOM 19 N6 A A 18 8.408 -6.902 -37.015 1.00 45.42 N
ATOM 20 N1 A A 18 6.917 -6.193 -35.404 1.00 41.92 N
ATOM 21 C2 A A 18 5.698 -6.248 -34.856 1.00 42.71 C
ATOM 22 N3 A A 18 4.650 -6.982 -35.222 1.00 47.70 N
ATOM 23 C4 A A 18 4.951 -7.739 -36.291 1.00 47.39 C
ATOM 24 P U A 19 -0.090 -6.394 -39.575 1.00 54.42 P
ATOM 25 OP1 U A 19 -1.515 -6.000 -39.703 1.00 55.38 O
ATOM 26 OP2 U A 19 0.669 -6.728 -40.803 1.00 61.27 O
ATOM 27 O5' U A 19 0.702 -5.302 -38.729 1.00 47.49 O
TER
ATOM 1 O3' U B 21 -3.158 -3.616 -29.544 1.00 53.20 O
ATOM 2 P A B 22 -3.195 -5.094 -30.188 1.00 58.48 P
ATOM 3 OP1 A B 22 -4.547 -5.285 -30.767 1.00 57.83 O
ATOM 4 OP2 A B 22 -2.741 -6.031 -29.137 1.00 58.09 O
ATOM 5 O5' A B 22 -2.106 -5.030 -31.351 1.00 55.88 O
ATOM 6 C5' A B 22 -1.998 -6.092 -32.293 1.00 53.11 C
ATOM 7 C4' A B 22 -0.618 -6.178 -32.905 1.00 44.04 C
ATOM 8 O4' A B 22 -0.206 -4.875 -33.391 1.00 49.86 O
ATOM 9 C3' A B 22 0.512 -6.602 -31.978 1.00 47.30 C
ATOM 10 O3' A B 22 0.570 -8.008 -31.785 1.00 44.38 O
ATOM 11 C2' A B 22 1.742 -6.036 -32.676 1.00 45.08 C
ATOM 12 O2' A B 22 2.138 -6.875 -33.749 1.00 45.21 O
ATOM 13 C1' A B 22 1.193 -4.736 -33.263 1.00 45.25 C
ATOM 14 N9 A B 22 1.479 -3.576 -32.402 1.00 46.18 N
ATOM 15 C8 A B 22 0.725 -3.068 -31.375 1.00 47.90 C
ATOM 16 N7 A B 22 1.260 -2.019 -30.803 1.00 45.78 N
ATOM 17 C5 A B 22 2.444 -1.825 -31.498 1.00 43.31 C
ATOM 18 C6 A B 22 3.467 -0.873 -31.375 1.00 44.28 C
ATOM 19 N6 A B 22 3.460 0.104 -30.467 1.00 40.74 N
ATOM 20 N1 A B 22 4.511 -0.962 -32.226 1.00 43.25 N
ATOM 21 C2 A B 22 4.516 -1.941 -33.137 1.00 37.67 C
ATOM 22 N3 A B 22 3.613 -2.892 -33.349 1.00 42.11 N
ATOM 23 C4 A B 22 2.590 -2.776 -32.487 1.00 42.36 C
ATOM 24 P G B 23 1.254 -8.619 -30.464 1.00 38.57 P
ATOM 25 OP1 G B 23 1.075 -10.091 -30.517 1.00 45.60 O
ATOM 26 OP2 G B 23 0.703 -7.878 -29.304 1.00 49.42 O
ATOM 27 O5' G B 23 2.792 -8.254 -30.658 1.00 43.08 O
TER
ATOM 2 P A A 18 2.031 -10.978 -41.641 1.00 66.87 P
ATOM 3 OP1 A A 18 0.709 -10.838 -42.297 1.00 64.81 O
ATOM 4 OP2 A A 18 3.242 -10.564 -42.387 1.00 63.80 O
ATOM 5 O5' A A 18 2.004 -10.272 -40.213 1.00 61.20 O
ATOM 6 C5' A A 18 1.050 -10.655 -39.233 1.00 59.72 C
ATOM 7 C4' A A 18 1.104 -9.764 -38.018 1.00 59.56 C
ATOM 8 O4' A A 18 2.287 -10.058 -37.236 1.00 61.82 O
ATOM 9 C3' A A 18 1.203 -8.272 -38.281 1.00 57.96 C
ATOM 10 O3' A A 18 -0.041 -7.687 -38.624 1.00 56.13 O
ATOM 11 C2' A A 18 1.784 -7.746 -36.973 1.00 58.78 C
ATOM 12 O2' A A 18 0.772 -7.625 -35.985 1.00 56.63 O
ATOM 13 C1' A A 18 2.720 -8.889 -36.570 1.00 57.92 C
ATOM 14 N9 A A 18 4.120 -8.616 -36.943 1.00 52.07 N
ATOM 15 C8 A A 18 4.860 -9.151 -37.967 1.00 54.04 C
ATOM 16 N7 A A 18 6.087 -8.690 -38.022 1.00 55.42 N
ATOM 17 C5 A A 18 6.156 -7.792 -36.964 1.00 49.43 C
ATOM 18 C6 A A 18 7.187 -6.966 -36.479 1.00 48.79 C
ATOM 19 N6 A A 18 8.408 -6.902 -37.015 1.00 45.42 N
ATOM 20 N1 A A 18 6.917 -6.193 -35.404 1.00 41.92 N
ATOM 21 C2 A A 18 5.698 -6.248 -34.856 1.00 42.71 C
ATOM 22 N3 A A 18 4.650 -6.982 -35.222 1.00 47.70 N
ATOM 23 C4 A A 18 4.951 -7.739 -36.291 1.00 47.39 C
ATOM 24 P U A 19 -0.090 -6.394 -39.575 1.00 54.42 P
ATOM 25 OP1 U A 19 -1.515 -6.000 -39.703 1.00 55.38 O
ATOM 26 OP2 U A 19 0.669 -6.728 -40.803 1.00 61.27 O
ATOM 27 O5' U A 19 0.702 -5.302 -38.729 1.00 47.49 O
TER
ATOM 1 O3' U B 21 -3.158 -3.616 -29.544 1.00 53.20 O
ATOM 2 P A B 22 -3.195 -5.094 -30.188 1.00 58.48 P
ATOM 3 OP1 A B 22 -4.547 -5.285 -30.767 1.00 57.83 O
ATOM 4 OP2 A B 22 -2.741 -6.031 -29.137 1.00 58.09 O
ATOM 5 O5' A B 22 -2.106 -5.030 -31.351 1.00 55.88 O
ATOM 6 C5' A B 22 -1.998 -6.092 -32.293 1.00 53.11 C
ATOM 7 C4' A B 22 -0.618 -6.178 -32.905 1.00 44.04 C
ATOM 8 O4' A B 22 -0.206 -4.875 -33.391 1.00 49.86 O
ATOM 9 C3' A B 22 0.512 -6.602 -31.978 1.00 47.30 C
ATOM 10 O3' A B 22 0.570 -8.008 -31.785 1.00 44.38 O
ATOM 11 C2' A B 22 1.742 -6.036 -32.676 1.00 45.08 C
ATOM 12 O2' A B 22 2.138 -6.875 -33.749 1.00 45.21 O
ATOM 13 C1' A B 22 1.193 -4.736 -33.263 1.00 45.25 C
ATOM 14 N9 A B 22 1.479 -3.576 -32.402 1.00 46.18 N
ATOM 15 C8 A B 22 0.725 -3.068 -31.375 1.00 47.90 C
ATOM 16 N7 A B 22 1.260 -2.019 -30.803 1.00 45.78 N
ATOM 17 C5 A B 22 2.444 -1.825 -31.498 1.00 43.31 C
ATOM 18 C6 A B 22 3.467 -0.873 -31.375 1.00 44.28 C
ATOM 19 N6 A B 22 3.460 0.104 -30.467 1.00 40.74 N
ATOM 20 N1 A B 22 4.511 -0.962 -32.226 1.00 43.25 N
ATOM 21 C2 A B 22 4.516 -1.941 -33.137 1.00 37.67 C
ATOM 22 N3 A B 22 3.613 -2.892 -33.349 1.00 42.11 N
ATOM 23 C4 A B 22 2.590 -2.776 -32.487 1.00 42.36 C
ATOM 24 P G B 23 1.254 -8.619 -30.464 1.00 38.57 P
ATOM 25 OP1 G B 23 1.075 -10.091 -30.517 1.00 45.60 O
ATOM 26 OP2 G B 23 0.703 -7.878 -29.304 1.00 49.42 O
ATOM 27 O5' G B 23 2.792 -8.254 -30.658 1.00 43.08 O
TER
Atoms:
OP1: (0.709,-10.838,-42.297)
OP2: (3.242,-10.564,-42.387)
C3': (1.203,-8.272,-38.281)
C1': (2.720,-8.889,-36.570)
C5': (1.050,-10.655,-39.233)
O4': (2.287,-10.058,-37.236)
C8: (4.860,-9.151,-37.967)
O2': (0.772,-7.625,-35.985)
C6: (7.187,-6.966,-36.479)
C5: (6.156,-7.792,-36.964)
C4: (4.951,-7.739,-36.291)
P: (2.031,-10.978,-41.641)
C4': (1.104,-9.764,-38.018)
C2': (1.784,-7.746,-36.973)
C2: (5.698,-6.248,-34.856)
N1: (6.917,-6.193,-35.404)
N3: (4.650,-6.982,-35.222)
N6: (8.408,-6.902,-37.015)
N7: (6.087,-8.690,-38.022)
N9: (4.120,-8.616,-36.943)
O5': (2.004,-10.272,-40.213)
O3': (-0.041,-7.687,-38.624)
OP2: (3.242,-10.564,-42.387)
C3': (1.203,-8.272,-38.281)
C1': (2.720,-8.889,-36.570)
C5': (1.050,-10.655,-39.233)
O4': (2.287,-10.058,-37.236)
C8: (4.860,-9.151,-37.967)
O2': (0.772,-7.625,-35.985)
C6: (7.187,-6.966,-36.479)
C5: (6.156,-7.792,-36.964)
C4: (4.951,-7.739,-36.291)
P: (2.031,-10.978,-41.641)
C4': (1.104,-9.764,-38.018)
C2': (1.784,-7.746,-36.973)
C2: (5.698,-6.248,-34.856)
N1: (6.917,-6.193,-35.404)
N3: (4.650,-6.982,-35.222)
N6: (8.408,-6.902,-37.015)
N7: (6.087,-8.690,-38.022)
N9: (4.120,-8.616,-36.943)
O5': (2.004,-10.272,-40.213)
O3': (-0.041,-7.687,-38.624)
OP1: (-4.547,-5.285,-30.767)
OP2: (-2.741,-6.031,-29.137)
C3': (0.512,-6.602,-31.978)
C1': (1.193,-4.736,-33.263)
C5': (-1.998,-6.092,-32.293)
O4': (-0.206,-4.875,-33.391)
C8: (0.725,-3.068,-31.375)
O2': (2.138,-6.875,-33.749)
C6: (3.467,-0.873,-31.375)
C5: (2.444,-1.825,-31.498)
C4: (2.590,-2.776,-32.487)
P: (-3.195,-5.094,-30.188)
C4': (-0.618,-6.178,-32.905)
C2': (1.742,-6.036,-32.676)
C2: (4.516,-1.941,-33.137)
N1: (4.511,-0.962,-32.226)
N3: (3.613,-2.892,-33.349)
N6: (3.460,0.104,-30.467)
N7: (1.260,-2.019,-30.803)
N9: (1.479,-3.576,-32.402)
O5': (-2.106,-5.030,-31.351)
O3': (0.570,-8.008,-31.785)
OP2: (-2.741,-6.031,-29.137)
C3': (0.512,-6.602,-31.978)
C1': (1.193,-4.736,-33.263)
C5': (-1.998,-6.092,-32.293)
O4': (-0.206,-4.875,-33.391)
C8: (0.725,-3.068,-31.375)
O2': (2.138,-6.875,-33.749)
C6: (3.467,-0.873,-31.375)
C5: (2.444,-1.825,-31.498)
C4: (2.590,-2.776,-32.487)
P: (-3.195,-5.094,-30.188)
C4': (-0.618,-6.178,-32.905)
C2': (1.742,-6.036,-32.676)
C2: (4.516,-1.941,-33.137)
N1: (4.511,-0.962,-32.226)
N3: (3.613,-2.892,-33.349)
N6: (3.460,0.104,-30.467)
N7: (1.260,-2.019,-30.803)
N9: (1.479,-3.576,-32.402)
O5': (-2.106,-5.030,-31.351)
O3': (0.570,-8.008,-31.785)
Image (generated by PyMOL):