Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21153:21552
Extra
PDB:
ATOM 1 O3' G A1152 -49.662 -63.261 66.993 1.00 86.55 O
ATOM 2 P A A1153 -49.995 -63.231 65.428 1.00 96.35 P
ATOM 3 OP1 A A1153 -48.748 -62.885 64.704 1.00 96.00 O
ATOM 4 OP2 A A1153 -51.184 -62.368 65.256 1.00 96.07 O
ATOM 5 O5' A A1153 -50.364 -64.737 65.140 1.00 96.91 O
ATOM 6 C5' A A1153 -49.406 -65.763 65.342 1.00 97.31 C
ATOM 7 C4' A A1153 -49.941 -67.094 64.895 1.00 97.79 C
ATOM 8 O4' A A1153 -51.036 -67.483 65.753 1.00 98.21 O
ATOM 9 C3' A A1153 -50.521 -67.135 63.485 1.00 97.56 C
ATOM 10 O3' A A1153 -49.519 -67.349 62.495 1.00 97.40 O
ATOM 11 C2' A A1153 -51.544 -68.264 63.565 1.00 98.11 C
ATOM 12 O2' A A1153 -50.914 -69.513 63.375 1.00 98.55 O
ATOM 13 C1' A A1153 -52.007 -68.184 65.019 1.00 98.41 C
ATOM 14 N9 A A1153 -53.303 -67.494 65.175 1.00 98.27 N
ATOM 15 C8 A A1153 -53.536 -66.291 65.802 1.00 97.94 C
ATOM 16 N7 A A1153 -54.808 -65.961 65.820 1.00 97.94 N
ATOM 17 C5 A A1153 -55.459 -67.011 65.159 1.00 98.29 C
ATOM 18 C6 A A1153 -56.810 -67.286 64.826 1.00 98.50 C
ATOM 19 N6 A A1153 -57.849 -66.505 65.109 1.00 98.39 N
ATOM 20 N1 A A1153 -57.105 -68.434 64.180 1.00 98.87 N
ATOM 21 C2 A A1153 -56.095 -69.251 63.876 1.00 99.01 C
ATOM 22 N3 A A1153 -54.800 -69.105 64.127 1.00 98.86 N
ATOM 23 C4 A A1153 -54.537 -67.962 64.776 1.00 98.50 C
ATOM 24 P G A1154 -49.474 -66.459 61.149 1.00 86.00 P
ATOM 25 OP1 G A1154 -48.065 -66.503 60.639 1.00 85.86 O
ATOM 26 OP2 G A1154 -50.081 -65.133 61.476 1.00 85.57 O
ATOM 27 O5' G A1154 -50.418 -67.275 60.164 1.00 86.21 O
TER
ATOM 1 O3' A B1551 -45.824 -75.926 60.918 1.00 91.26 O
ATOM 2 P A B1552 -45.918 -76.320 62.478 1.00 92.42 P
ATOM 3 OP1 A B1552 -44.507 -76.569 62.953 1.00 92.66 O
ATOM 4 OP2 A B1552 -46.932 -77.410 62.604 1.00 92.97 O
ATOM 5 O5' A B1552 -46.466 -74.981 63.129 1.00 91.95 O
ATOM 6 C5' A B1552 -45.829 -73.753 62.856 1.00 91.32 C
ATOM 7 C4' A B1552 -46.804 -72.628 62.886 1.00 90.82 C
ATOM 8 O4' A B1552 -47.797 -72.818 61.857 1.00 90.71 O
ATOM 9 C3' A B1552 -47.608 -72.496 64.158 1.00 91.06 C
ATOM 10 O3' A B1552 -46.892 -71.831 65.176 1.00 90.98 O
ATOM 11 C2' A B1552 -48.842 -71.739 63.699 1.00 90.66 C
ATOM 12 O2' A B1552 -48.590 -70.343 63.659 1.00 90.03 O
ATOM 13 C1' A B1552 -49.013 -72.246 62.268 1.00 90.58 C
ATOM 14 N9 A B1552 -50.063 -73.259 62.163 1.00 91.05 N
ATOM 15 C8 A B1552 -49.915 -74.602 61.972 1.00 91.61 C
ATOM 16 N7 A B1552 -51.068 -75.209 61.906 1.00 91.92 N
ATOM 17 C5 A B1552 -52.029 -74.212 62.061 1.00 91.57 C
ATOM 18 C6 A B1552 -53.447 -74.197 62.078 1.00 91.67 C
ATOM 19 N6 A B1552 -54.224 -75.274 61.942 1.00 92.18 N
ATOM 20 N1 A B1552 -54.075 -73.017 62.250 1.00 91.24 N
ATOM 21 C2 A B1552 -53.323 -71.931 62.391 1.00 90.74 C
ATOM 22 N3 A B1552 -51.999 -71.818 62.390 1.00 90.59 N
ATOM 23 C4 A B1552 -51.404 -73.004 62.224 1.00 91.03 C
ATOM 24 P C B1553 -47.076 -72.251 66.711 1.00 98.08 P
ATOM 25 OP1 C B1553 -46.419 -71.197 67.530 1.00 97.79 O
ATOM 26 OP2 C B1553 -46.615 -73.653 66.839 1.00 98.76 O
ATOM 27 O5' C B1553 -48.652 -72.195 66.910 1.00 98.15 O
TER
ATOM 2 P A A1153 -49.995 -63.231 65.428 1.00 96.35 P
ATOM 3 OP1 A A1153 -48.748 -62.885 64.704 1.00 96.00 O
ATOM 4 OP2 A A1153 -51.184 -62.368 65.256 1.00 96.07 O
ATOM 5 O5' A A1153 -50.364 -64.737 65.140 1.00 96.91 O
ATOM 6 C5' A A1153 -49.406 -65.763 65.342 1.00 97.31 C
ATOM 7 C4' A A1153 -49.941 -67.094 64.895 1.00 97.79 C
ATOM 8 O4' A A1153 -51.036 -67.483 65.753 1.00 98.21 O
ATOM 9 C3' A A1153 -50.521 -67.135 63.485 1.00 97.56 C
ATOM 10 O3' A A1153 -49.519 -67.349 62.495 1.00 97.40 O
ATOM 11 C2' A A1153 -51.544 -68.264 63.565 1.00 98.11 C
ATOM 12 O2' A A1153 -50.914 -69.513 63.375 1.00 98.55 O
ATOM 13 C1' A A1153 -52.007 -68.184 65.019 1.00 98.41 C
ATOM 14 N9 A A1153 -53.303 -67.494 65.175 1.00 98.27 N
ATOM 15 C8 A A1153 -53.536 -66.291 65.802 1.00 97.94 C
ATOM 16 N7 A A1153 -54.808 -65.961 65.820 1.00 97.94 N
ATOM 17 C5 A A1153 -55.459 -67.011 65.159 1.00 98.29 C
ATOM 18 C6 A A1153 -56.810 -67.286 64.826 1.00 98.50 C
ATOM 19 N6 A A1153 -57.849 -66.505 65.109 1.00 98.39 N
ATOM 20 N1 A A1153 -57.105 -68.434 64.180 1.00 98.87 N
ATOM 21 C2 A A1153 -56.095 -69.251 63.876 1.00 99.01 C
ATOM 22 N3 A A1153 -54.800 -69.105 64.127 1.00 98.86 N
ATOM 23 C4 A A1153 -54.537 -67.962 64.776 1.00 98.50 C
ATOM 24 P G A1154 -49.474 -66.459 61.149 1.00 86.00 P
ATOM 25 OP1 G A1154 -48.065 -66.503 60.639 1.00 85.86 O
ATOM 26 OP2 G A1154 -50.081 -65.133 61.476 1.00 85.57 O
ATOM 27 O5' G A1154 -50.418 -67.275 60.164 1.00 86.21 O
TER
ATOM 1 O3' A B1551 -45.824 -75.926 60.918 1.00 91.26 O
ATOM 2 P A B1552 -45.918 -76.320 62.478 1.00 92.42 P
ATOM 3 OP1 A B1552 -44.507 -76.569 62.953 1.00 92.66 O
ATOM 4 OP2 A B1552 -46.932 -77.410 62.604 1.00 92.97 O
ATOM 5 O5' A B1552 -46.466 -74.981 63.129 1.00 91.95 O
ATOM 6 C5' A B1552 -45.829 -73.753 62.856 1.00 91.32 C
ATOM 7 C4' A B1552 -46.804 -72.628 62.886 1.00 90.82 C
ATOM 8 O4' A B1552 -47.797 -72.818 61.857 1.00 90.71 O
ATOM 9 C3' A B1552 -47.608 -72.496 64.158 1.00 91.06 C
ATOM 10 O3' A B1552 -46.892 -71.831 65.176 1.00 90.98 O
ATOM 11 C2' A B1552 -48.842 -71.739 63.699 1.00 90.66 C
ATOM 12 O2' A B1552 -48.590 -70.343 63.659 1.00 90.03 O
ATOM 13 C1' A B1552 -49.013 -72.246 62.268 1.00 90.58 C
ATOM 14 N9 A B1552 -50.063 -73.259 62.163 1.00 91.05 N
ATOM 15 C8 A B1552 -49.915 -74.602 61.972 1.00 91.61 C
ATOM 16 N7 A B1552 -51.068 -75.209 61.906 1.00 91.92 N
ATOM 17 C5 A B1552 -52.029 -74.212 62.061 1.00 91.57 C
ATOM 18 C6 A B1552 -53.447 -74.197 62.078 1.00 91.67 C
ATOM 19 N6 A B1552 -54.224 -75.274 61.942 1.00 92.18 N
ATOM 20 N1 A B1552 -54.075 -73.017 62.250 1.00 91.24 N
ATOM 21 C2 A B1552 -53.323 -71.931 62.391 1.00 90.74 C
ATOM 22 N3 A B1552 -51.999 -71.818 62.390 1.00 90.59 N
ATOM 23 C4 A B1552 -51.404 -73.004 62.224 1.00 91.03 C
ATOM 24 P C B1553 -47.076 -72.251 66.711 1.00 98.08 P
ATOM 25 OP1 C B1553 -46.419 -71.197 67.530 1.00 97.79 O
ATOM 26 OP2 C B1553 -46.615 -73.653 66.839 1.00 98.76 O
ATOM 27 O5' C B1553 -48.652 -72.195 66.910 1.00 98.15 O
TER
Atoms:
OP1: (-48.748,-62.885,64.704)
OP2: (-51.184,-62.368,65.256)
C3': (-50.521,-67.135,63.485)
C1': (-52.007,-68.184,65.019)
C5': (-49.406,-65.763,65.342)
O4': (-51.036,-67.483,65.753)
C8: (-53.536,-66.291,65.802)
O2': (-50.914,-69.513,63.375)
C6: (-56.810,-67.286,64.826)
C5: (-55.459,-67.011,65.159)
C4: (-54.537,-67.962,64.776)
P: (-49.995,-63.231,65.428)
C4': (-49.941,-67.094,64.895)
C2': (-51.544,-68.264,63.565)
C2: (-56.095,-69.251,63.876)
N1: (-57.105,-68.434,64.180)
N3: (-54.800,-69.105,64.127)
N6: (-57.849,-66.505,65.109)
N7: (-54.808,-65.961,65.820)
N9: (-53.303,-67.494,65.175)
O5': (-50.364,-64.737,65.140)
O3': (-49.519,-67.349,62.495)
OP2: (-51.184,-62.368,65.256)
C3': (-50.521,-67.135,63.485)
C1': (-52.007,-68.184,65.019)
C5': (-49.406,-65.763,65.342)
O4': (-51.036,-67.483,65.753)
C8: (-53.536,-66.291,65.802)
O2': (-50.914,-69.513,63.375)
C6: (-56.810,-67.286,64.826)
C5: (-55.459,-67.011,65.159)
C4: (-54.537,-67.962,64.776)
P: (-49.995,-63.231,65.428)
C4': (-49.941,-67.094,64.895)
C2': (-51.544,-68.264,63.565)
C2: (-56.095,-69.251,63.876)
N1: (-57.105,-68.434,64.180)
N3: (-54.800,-69.105,64.127)
N6: (-57.849,-66.505,65.109)
N7: (-54.808,-65.961,65.820)
N9: (-53.303,-67.494,65.175)
O5': (-50.364,-64.737,65.140)
O3': (-49.519,-67.349,62.495)
OP1: (-44.507,-76.569,62.953)
OP2: (-46.932,-77.410,62.604)
C3': (-47.608,-72.496,64.158)
C1': (-49.013,-72.246,62.268)
C5': (-45.829,-73.753,62.856)
O4': (-47.797,-72.818,61.857)
C8: (-49.915,-74.602,61.972)
O2': (-48.590,-70.343,63.659)
C6: (-53.447,-74.197,62.078)
C5: (-52.029,-74.212,62.061)
C4: (-51.404,-73.004,62.224)
P: (-45.918,-76.320,62.478)
C4': (-46.804,-72.628,62.886)
C2': (-48.842,-71.739,63.699)
C2: (-53.323,-71.931,62.391)
N1: (-54.075,-73.017,62.250)
N3: (-51.999,-71.818,62.390)
N6: (-54.224,-75.274,61.942)
N7: (-51.068,-75.209,61.906)
N9: (-50.063,-73.259,62.163)
O5': (-46.466,-74.981,63.129)
O3': (-46.892,-71.831,65.176)
OP2: (-46.932,-77.410,62.604)
C3': (-47.608,-72.496,64.158)
C1': (-49.013,-72.246,62.268)
C5': (-45.829,-73.753,62.856)
O4': (-47.797,-72.818,61.857)
C8: (-49.915,-74.602,61.972)
O2': (-48.590,-70.343,63.659)
C6: (-53.447,-74.197,62.078)
C5: (-52.029,-74.212,62.061)
C4: (-51.404,-73.004,62.224)
P: (-45.918,-76.320,62.478)
C4': (-46.804,-72.628,62.886)
C2': (-48.842,-71.739,63.699)
C2: (-53.323,-71.931,62.391)
N1: (-54.075,-73.017,62.250)
N3: (-51.999,-71.818,62.390)
N6: (-54.224,-75.274,61.942)
N7: (-51.068,-75.209,61.906)
N9: (-50.063,-73.259,62.163)
O5': (-46.466,-74.981,63.129)
O3': (-46.892,-71.831,65.176)
Image (generated by PyMOL):