Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:131:1754
Extra
PDB:
ATOM 1 O3' G A 30 37.012 -22.734 105.026 1.00 35.00 O
ATOM 2 P A A 31 36.838 -23.718 103.781 1.00 36.37 P
ATOM 3 OP1 A A 31 35.743 -23.169 102.976 1.00 36.14 O
ATOM 4 OP2 A A 31 36.731 -25.088 104.321 1.00 36.61 O
ATOM 5 O5' A A 31 38.214 -23.554 103.004 1.00 36.19 O
ATOM 6 C5' A A 31 38.251 -23.288 101.628 1.00 35.86 C
ATOM 7 C4' A A 31 38.014 -21.834 101.368 1.00 35.70 C
ATOM 8 O4' A A 31 38.982 -21.039 102.080 1.00 35.82 O
ATOM 9 C3' A A 31 38.134 -21.420 99.925 1.00 35.36 C
ATOM 10 O3' A A 31 36.919 -21.589 99.276 1.00 35.23 O
ATOM 11 C2' A A 31 38.541 -19.963 100.023 1.00 35.30 C
ATOM 12 O2' A A 31 37.416 -19.134 100.279 1.00 35.30 O
ATOM 13 C1' A A 31 39.410 -19.972 101.271 1.00 35.58 C
ATOM 14 N9 A A 31 40.824 -20.172 100.948 1.00 35.55 N
ATOM 15 C8 A A 31 41.604 -21.263 101.198 1.00 35.69 C
ATOM 16 N7 A A 31 42.835 -21.161 100.773 1.00 35.62 N
ATOM 17 C5 A A 31 42.816 -19.914 100.203 1.00 35.42 C
ATOM 18 C6 A A 31 43.821 -19.209 99.607 1.00 35.28 C
ATOM 19 N6 A A 31 45.011 -19.742 99.524 1.00 35.34 N
ATOM 20 N1 A A 31 43.558 -17.988 99.131 1.00 35.11 N
ATOM 21 C2 A A 31 42.317 -17.519 99.284 1.00 35.09 C
ATOM 22 N3 A A 31 41.260 -18.090 99.865 1.00 35.21 N
ATOM 23 C4 A A 31 41.595 -19.300 100.289 1.00 35.37 C
ATOM 24 P A A 32 36.686 -22.671 98.137 1.00 34.61 P
ATOM 25 OP1 A A 32 35.257 -23.055 98.210 1.00 34.65 O
ATOM 26 OP2 A A 32 37.684 -23.715 98.285 1.00 34.72 O
ATOM 27 O5' A A 32 36.981 -21.806 96.850 1.00 34.30 O
TER
ATOM 1 O3' G B 753 33.684 -14.916 94.933 1.00 39.36 O
ATOM 2 P A B 754 33.703 -14.309 96.412 1.00 33.72 P
ATOM 3 OP1 A B 754 32.532 -14.825 97.126 1.00 33.89 O
ATOM 4 OP2 A B 754 33.831 -12.868 96.278 1.00 33.67 O
ATOM 5 O5' A B 754 35.018 -14.900 97.037 1.00 33.83 O
ATOM 6 C5' A B 754 35.117 -16.225 97.455 1.00 33.95 C
ATOM 7 C4' A B 754 36.477 -16.489 98.058 1.00 34.07 C
ATOM 8 O4' A B 754 37.513 -15.967 97.176 1.00 33.88 O
ATOM 9 C3' A B 754 36.749 -15.819 99.385 1.00 34.32 C
ATOM 10 O3' A B 754 36.276 -16.576 100.485 1.00 34.58 O
ATOM 11 C2' A B 754 38.257 -15.669 99.384 1.00 34.32 C
ATOM 12 O2' A B 754 38.848 -16.901 99.731 1.00 34.44 O
ATOM 13 C1' A B 754 38.560 -15.424 97.921 1.00 34.02 C
ATOM 14 N9 A B 754 38.699 -14.000 97.600 1.00 33.92 N
ATOM 15 C8 A B 754 37.953 -13.197 96.805 1.00 33.74 C
ATOM 16 N7 A B 754 38.383 -11.950 96.706 1.00 33.71 N
ATOM 17 C5 A B 754 39.529 -11.941 97.481 1.00 33.87 C
ATOM 18 C6 A B 754 40.489 -10.955 97.824 1.00 33.95 C
ATOM 19 N6 A B 754 40.502 -9.703 97.442 1.00 33.87 N
ATOM 20 N1 A B 754 41.497 -11.287 98.623 1.00 34.13 N
ATOM 21 C2 A B 754 41.572 -12.530 99.069 1.00 34.24 C
ATOM 22 N3 A B 754 40.748 -13.547 98.832 1.00 34.19 N
ATOM 23 C4 A B 754 39.721 -13.200 98.021 1.00 34.00 C
ATOM 24 P U B 755 35.708 -15.832 101.795 1.00 38.68 P
ATOM 25 OP1 U B 755 34.956 -16.820 102.562 1.00 38.88 O
ATOM 26 OP2 U B 755 35.004 -14.611 101.350 1.00 38.55 O
ATOM 27 O5' U B 755 37.009 -15.432 102.574 1.00 38.84 O
TER
ATOM 2 P A A 31 36.838 -23.718 103.781 1.00 36.37 P
ATOM 3 OP1 A A 31 35.743 -23.169 102.976 1.00 36.14 O
ATOM 4 OP2 A A 31 36.731 -25.088 104.321 1.00 36.61 O
ATOM 5 O5' A A 31 38.214 -23.554 103.004 1.00 36.19 O
ATOM 6 C5' A A 31 38.251 -23.288 101.628 1.00 35.86 C
ATOM 7 C4' A A 31 38.014 -21.834 101.368 1.00 35.70 C
ATOM 8 O4' A A 31 38.982 -21.039 102.080 1.00 35.82 O
ATOM 9 C3' A A 31 38.134 -21.420 99.925 1.00 35.36 C
ATOM 10 O3' A A 31 36.919 -21.589 99.276 1.00 35.23 O
ATOM 11 C2' A A 31 38.541 -19.963 100.023 1.00 35.30 C
ATOM 12 O2' A A 31 37.416 -19.134 100.279 1.00 35.30 O
ATOM 13 C1' A A 31 39.410 -19.972 101.271 1.00 35.58 C
ATOM 14 N9 A A 31 40.824 -20.172 100.948 1.00 35.55 N
ATOM 15 C8 A A 31 41.604 -21.263 101.198 1.00 35.69 C
ATOM 16 N7 A A 31 42.835 -21.161 100.773 1.00 35.62 N
ATOM 17 C5 A A 31 42.816 -19.914 100.203 1.00 35.42 C
ATOM 18 C6 A A 31 43.821 -19.209 99.607 1.00 35.28 C
ATOM 19 N6 A A 31 45.011 -19.742 99.524 1.00 35.34 N
ATOM 20 N1 A A 31 43.558 -17.988 99.131 1.00 35.11 N
ATOM 21 C2 A A 31 42.317 -17.519 99.284 1.00 35.09 C
ATOM 22 N3 A A 31 41.260 -18.090 99.865 1.00 35.21 N
ATOM 23 C4 A A 31 41.595 -19.300 100.289 1.00 35.37 C
ATOM 24 P A A 32 36.686 -22.671 98.137 1.00 34.61 P
ATOM 25 OP1 A A 32 35.257 -23.055 98.210 1.00 34.65 O
ATOM 26 OP2 A A 32 37.684 -23.715 98.285 1.00 34.72 O
ATOM 27 O5' A A 32 36.981 -21.806 96.850 1.00 34.30 O
TER
ATOM 1 O3' G B 753 33.684 -14.916 94.933 1.00 39.36 O
ATOM 2 P A B 754 33.703 -14.309 96.412 1.00 33.72 P
ATOM 3 OP1 A B 754 32.532 -14.825 97.126 1.00 33.89 O
ATOM 4 OP2 A B 754 33.831 -12.868 96.278 1.00 33.67 O
ATOM 5 O5' A B 754 35.018 -14.900 97.037 1.00 33.83 O
ATOM 6 C5' A B 754 35.117 -16.225 97.455 1.00 33.95 C
ATOM 7 C4' A B 754 36.477 -16.489 98.058 1.00 34.07 C
ATOM 8 O4' A B 754 37.513 -15.967 97.176 1.00 33.88 O
ATOM 9 C3' A B 754 36.749 -15.819 99.385 1.00 34.32 C
ATOM 10 O3' A B 754 36.276 -16.576 100.485 1.00 34.58 O
ATOM 11 C2' A B 754 38.257 -15.669 99.384 1.00 34.32 C
ATOM 12 O2' A B 754 38.848 -16.901 99.731 1.00 34.44 O
ATOM 13 C1' A B 754 38.560 -15.424 97.921 1.00 34.02 C
ATOM 14 N9 A B 754 38.699 -14.000 97.600 1.00 33.92 N
ATOM 15 C8 A B 754 37.953 -13.197 96.805 1.00 33.74 C
ATOM 16 N7 A B 754 38.383 -11.950 96.706 1.00 33.71 N
ATOM 17 C5 A B 754 39.529 -11.941 97.481 1.00 33.87 C
ATOM 18 C6 A B 754 40.489 -10.955 97.824 1.00 33.95 C
ATOM 19 N6 A B 754 40.502 -9.703 97.442 1.00 33.87 N
ATOM 20 N1 A B 754 41.497 -11.287 98.623 1.00 34.13 N
ATOM 21 C2 A B 754 41.572 -12.530 99.069 1.00 34.24 C
ATOM 22 N3 A B 754 40.748 -13.547 98.832 1.00 34.19 N
ATOM 23 C4 A B 754 39.721 -13.200 98.021 1.00 34.00 C
ATOM 24 P U B 755 35.708 -15.832 101.795 1.00 38.68 P
ATOM 25 OP1 U B 755 34.956 -16.820 102.562 1.00 38.88 O
ATOM 26 OP2 U B 755 35.004 -14.611 101.350 1.00 38.55 O
ATOM 27 O5' U B 755 37.009 -15.432 102.574 1.00 38.84 O
TER
Atoms:
OP1: (35.743,-23.169,102.976)
OP2: (36.731,-25.088,104.321)
C3': (38.134,-21.420,99.925)
C1': (39.410,-19.972,101.271)
C5': (38.251,-23.288,101.628)
O4': (38.982,-21.039,102.080)
C8: (41.604,-21.263,101.198)
O2': (37.416,-19.134,100.279)
C6: (43.821,-19.209,99.607)
C5: (42.816,-19.914,100.203)
C4: (41.595,-19.300,100.289)
P: (36.838,-23.718,103.781)
C4': (38.014,-21.834,101.368)
C2': (38.541,-19.963,100.023)
C2: (42.317,-17.519,99.284)
N1: (43.558,-17.988,99.131)
N3: (41.260,-18.090,99.865)
N6: (45.011,-19.742,99.524)
N7: (42.835,-21.161,100.773)
N9: (40.824,-20.172,100.948)
O5': (38.214,-23.554,103.004)
O3': (36.919,-21.589,99.276)
OP2: (36.731,-25.088,104.321)
C3': (38.134,-21.420,99.925)
C1': (39.410,-19.972,101.271)
C5': (38.251,-23.288,101.628)
O4': (38.982,-21.039,102.080)
C8: (41.604,-21.263,101.198)
O2': (37.416,-19.134,100.279)
C6: (43.821,-19.209,99.607)
C5: (42.816,-19.914,100.203)
C4: (41.595,-19.300,100.289)
P: (36.838,-23.718,103.781)
C4': (38.014,-21.834,101.368)
C2': (38.541,-19.963,100.023)
C2: (42.317,-17.519,99.284)
N1: (43.558,-17.988,99.131)
N3: (41.260,-18.090,99.865)
N6: (45.011,-19.742,99.524)
N7: (42.835,-21.161,100.773)
N9: (40.824,-20.172,100.948)
O5': (38.214,-23.554,103.004)
O3': (36.919,-21.589,99.276)
OP1: (32.532,-14.825,97.126)
OP2: (33.831,-12.868,96.278)
C3': (36.749,-15.819,99.385)
C1': (38.560,-15.424,97.921)
C5': (35.117,-16.225,97.455)
O4': (37.513,-15.967,97.176)
C8: (37.953,-13.197,96.805)
O2': (38.848,-16.901,99.731)
C6: (40.489,-10.955,97.824)
C5: (39.529,-11.941,97.481)
C4: (39.721,-13.200,98.021)
P: (33.703,-14.309,96.412)
C4': (36.477,-16.489,98.058)
C2': (38.257,-15.669,99.384)
C2: (41.572,-12.530,99.069)
N1: (41.497,-11.287,98.623)
N3: (40.748,-13.547,98.832)
N6: (40.502,-9.703,97.442)
N7: (38.383,-11.950,96.706)
N9: (38.699,-14.000,97.600)
O5': (35.018,-14.900,97.037)
O3': (36.276,-16.576,100.485)
OP2: (33.831,-12.868,96.278)
C3': (36.749,-15.819,99.385)
C1': (38.560,-15.424,97.921)
C5': (35.117,-16.225,97.455)
O4': (37.513,-15.967,97.176)
C8: (37.953,-13.197,96.805)
O2': (38.848,-16.901,99.731)
C6: (40.489,-10.955,97.824)
C5: (39.529,-11.941,97.481)
C4: (39.721,-13.200,98.021)
P: (33.703,-14.309,96.412)
C4': (36.477,-16.489,98.058)
C2': (38.257,-15.669,99.384)
C2: (41.572,-12.530,99.069)
N1: (41.497,-11.287,98.623)
N3: (40.748,-13.547,98.832)
N6: (40.502,-9.703,97.442)
N7: (38.383,-11.950,96.706)
N9: (38.699,-14.000,97.600)
O5': (35.018,-14.900,97.037)
O3': (36.276,-16.576,100.485)
Image (generated by PyMOL):