Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1261:A2005
Extra
PDB:
ATOM 1 O3' U A1260 -46.384 -76.295 -6.141 1.00 0.01 O
ATOM 2 P A A1261 -45.323 -75.100 -6.249 1.00 0.01 P
ATOM 3 OP1 A A1261 -45.547 -74.431 -7.514 1.00 0.01 O
ATOM 4 OP2 A A1261 -43.997 -75.658 -5.973 1.00 0.01 O
ATOM 5 O5' A A1261 -45.752 -74.150 -5.090 1.00 0.01 O
ATOM 6 C5' A A1261 -46.874 -73.315 -5.222 1.00 0.01 C
ATOM 7 C4' A A1261 -46.825 -72.194 -4.231 1.00 0.01 C
ATOM 8 O4' A A1261 -47.116 -72.698 -2.909 1.00 0.01 O
ATOM 9 C3' A A1261 -45.490 -71.508 -4.074 1.00 0.01 C
ATOM 10 O3' A A1261 -45.259 -70.544 -5.080 1.00 0.01 O
ATOM 11 C2' A A1261 -45.626 -70.911 -2.703 1.00 0.01 C
ATOM 12 O2' A A1261 -46.483 -69.793 -2.753 1.00 0.01 O
ATOM 13 C1' A A1261 -46.354 -72.013 -1.967 1.00 0.01 C
ATOM 14 N9 A A1261 -45.447 -72.972 -1.324 1.00 0.01 N
ATOM 15 C8 A A1261 -44.982 -74.110 -1.878 1.00 0.01 C
ATOM 16 N7 A A1261 -44.230 -74.818 -1.085 1.00 0.01 N
ATOM 17 C5 A A1261 -44.211 -74.102 0.089 1.00 0.01 C
ATOM 18 C6 A A1261 -43.590 -74.336 1.313 1.00 0.01 C
ATOM 19 N6 A A1261 -42.834 -75.392 1.551 1.00 0.01 N
ATOM 20 N1 A A1261 -43.756 -73.462 2.295 1.00 0.01 N
ATOM 21 C2 A A1261 -44.512 -72.414 2.032 1.00 0.01 C
ATOM 22 N3 A A1261 -45.133 -72.073 0.925 1.00 0.01 N
ATOM 23 C4 A A1261 -44.961 -72.973 -0.034 1.00 0.01 C
ATOM 24 P A A1262 -43.815 -69.859 -5.249 1.00 0.01 P
ATOM 25 OP1 A A1262 -44.037 -68.521 -5.859 1.00 0.01 O
ATOM 26 OP2 A A1262 -42.941 -70.834 -5.950 1.00 0.01 O
ATOM 27 O5' A A1262 -43.309 -69.691 -3.761 1.00 0.01 O
TER
ATOM 1 O3' U B2004 -36.043 -79.720 5.576 1.00 0.01 O
ATOM 2 P G B2005 -37.313 -80.445 6.150 1.00 0.01 P
ATOM 3 OP1 G B2005 -37.235 -80.342 7.588 1.00 0.01 O
ATOM 4 OP2 G B2005 -37.383 -81.779 5.539 1.00 0.01 O
ATOM 5 O5' G B2005 -38.473 -79.529 5.625 1.00 0.01 O
ATOM 6 C5' G B2005 -38.885 -78.397 6.369 1.00 0.01 C
ATOM 7 C4' G B2005 -39.961 -77.639 5.656 1.00 0.01 C
ATOM 8 O4' G B2005 -39.547 -77.386 4.303 1.00 0.01 O
ATOM 9 C3' G B2005 -41.281 -78.351 5.491 1.00 0.01 C
ATOM 10 O3' G B2005 -42.084 -78.299 6.648 1.00 0.01 O
ATOM 11 C2' G B2005 -41.869 -77.615 4.323 1.00 0.01 C
ATOM 12 O2' G B2005 -42.312 -76.347 4.722 1.00 0.01 O
ATOM 13 C1' G B2005 -40.646 -77.432 3.450 1.00 0.01 C
ATOM 14 N9 G B2005 -40.472 -78.566 2.571 1.00 0.01 N
ATOM 15 C8 G B2005 -39.671 -79.603 2.826 1.00 0.01 C
ATOM 16 N7 G B2005 -39.757 -80.511 1.918 1.00 0.01 N
ATOM 17 C5 G B2005 -40.672 -80.036 1.030 1.00 0.01 C
ATOM 18 C6 G B2005 -41.145 -80.608 -0.147 1.00 0.01 C
ATOM 19 O6 G B2005 -40.843 -81.686 -0.645 1.00 0.01 O
ATOM 20 N1 G B2005 -42.057 -79.802 -0.750 1.00 0.01 N
ATOM 21 C2 G B2005 -42.448 -78.618 -0.251 1.00 0.01 C
ATOM 22 N2 G B2005 -43.354 -77.980 -0.969 1.00 0.01 N
ATOM 23 N3 G B2005 -42.013 -78.071 0.850 1.00 0.01 N
ATOM 24 C4 G B2005 -41.124 -78.840 1.433 1.00 0.01 C
ATOM 25 P A B2006 -43.527 -78.976 6.655 1.00 0.01 P
ATOM 26 OP1 A B2006 -44.042 -78.899 8.033 1.00 0.01 O
ATOM 27 OP2 A B2006 -43.378 -80.308 6.021 1.00 0.01 O
ATOM 28 O5' A B2006 -44.366 -78.012 5.728 1.00 0.01 O
TER
ATOM 2 P A A1261 -45.323 -75.100 -6.249 1.00 0.01 P
ATOM 3 OP1 A A1261 -45.547 -74.431 -7.514 1.00 0.01 O
ATOM 4 OP2 A A1261 -43.997 -75.658 -5.973 1.00 0.01 O
ATOM 5 O5' A A1261 -45.752 -74.150 -5.090 1.00 0.01 O
ATOM 6 C5' A A1261 -46.874 -73.315 -5.222 1.00 0.01 C
ATOM 7 C4' A A1261 -46.825 -72.194 -4.231 1.00 0.01 C
ATOM 8 O4' A A1261 -47.116 -72.698 -2.909 1.00 0.01 O
ATOM 9 C3' A A1261 -45.490 -71.508 -4.074 1.00 0.01 C
ATOM 10 O3' A A1261 -45.259 -70.544 -5.080 1.00 0.01 O
ATOM 11 C2' A A1261 -45.626 -70.911 -2.703 1.00 0.01 C
ATOM 12 O2' A A1261 -46.483 -69.793 -2.753 1.00 0.01 O
ATOM 13 C1' A A1261 -46.354 -72.013 -1.967 1.00 0.01 C
ATOM 14 N9 A A1261 -45.447 -72.972 -1.324 1.00 0.01 N
ATOM 15 C8 A A1261 -44.982 -74.110 -1.878 1.00 0.01 C
ATOM 16 N7 A A1261 -44.230 -74.818 -1.085 1.00 0.01 N
ATOM 17 C5 A A1261 -44.211 -74.102 0.089 1.00 0.01 C
ATOM 18 C6 A A1261 -43.590 -74.336 1.313 1.00 0.01 C
ATOM 19 N6 A A1261 -42.834 -75.392 1.551 1.00 0.01 N
ATOM 20 N1 A A1261 -43.756 -73.462 2.295 1.00 0.01 N
ATOM 21 C2 A A1261 -44.512 -72.414 2.032 1.00 0.01 C
ATOM 22 N3 A A1261 -45.133 -72.073 0.925 1.00 0.01 N
ATOM 23 C4 A A1261 -44.961 -72.973 -0.034 1.00 0.01 C
ATOM 24 P A A1262 -43.815 -69.859 -5.249 1.00 0.01 P
ATOM 25 OP1 A A1262 -44.037 -68.521 -5.859 1.00 0.01 O
ATOM 26 OP2 A A1262 -42.941 -70.834 -5.950 1.00 0.01 O
ATOM 27 O5' A A1262 -43.309 -69.691 -3.761 1.00 0.01 O
TER
ATOM 1 O3' U B2004 -36.043 -79.720 5.576 1.00 0.01 O
ATOM 2 P G B2005 -37.313 -80.445 6.150 1.00 0.01 P
ATOM 3 OP1 G B2005 -37.235 -80.342 7.588 1.00 0.01 O
ATOM 4 OP2 G B2005 -37.383 -81.779 5.539 1.00 0.01 O
ATOM 5 O5' G B2005 -38.473 -79.529 5.625 1.00 0.01 O
ATOM 6 C5' G B2005 -38.885 -78.397 6.369 1.00 0.01 C
ATOM 7 C4' G B2005 -39.961 -77.639 5.656 1.00 0.01 C
ATOM 8 O4' G B2005 -39.547 -77.386 4.303 1.00 0.01 O
ATOM 9 C3' G B2005 -41.281 -78.351 5.491 1.00 0.01 C
ATOM 10 O3' G B2005 -42.084 -78.299 6.648 1.00 0.01 O
ATOM 11 C2' G B2005 -41.869 -77.615 4.323 1.00 0.01 C
ATOM 12 O2' G B2005 -42.312 -76.347 4.722 1.00 0.01 O
ATOM 13 C1' G B2005 -40.646 -77.432 3.450 1.00 0.01 C
ATOM 14 N9 G B2005 -40.472 -78.566 2.571 1.00 0.01 N
ATOM 15 C8 G B2005 -39.671 -79.603 2.826 1.00 0.01 C
ATOM 16 N7 G B2005 -39.757 -80.511 1.918 1.00 0.01 N
ATOM 17 C5 G B2005 -40.672 -80.036 1.030 1.00 0.01 C
ATOM 18 C6 G B2005 -41.145 -80.608 -0.147 1.00 0.01 C
ATOM 19 O6 G B2005 -40.843 -81.686 -0.645 1.00 0.01 O
ATOM 20 N1 G B2005 -42.057 -79.802 -0.750 1.00 0.01 N
ATOM 21 C2 G B2005 -42.448 -78.618 -0.251 1.00 0.01 C
ATOM 22 N2 G B2005 -43.354 -77.980 -0.969 1.00 0.01 N
ATOM 23 N3 G B2005 -42.013 -78.071 0.850 1.00 0.01 N
ATOM 24 C4 G B2005 -41.124 -78.840 1.433 1.00 0.01 C
ATOM 25 P A B2006 -43.527 -78.976 6.655 1.00 0.01 P
ATOM 26 OP1 A B2006 -44.042 -78.899 8.033 1.00 0.01 O
ATOM 27 OP2 A B2006 -43.378 -80.308 6.021 1.00 0.01 O
ATOM 28 O5' A B2006 -44.366 -78.012 5.728 1.00 0.01 O
TER
Atoms:
OP1: (-45.547,-74.431,-7.514)
OP2: (-43.997,-75.658,-5.973)
C3': (-45.490,-71.508,-4.074)
C1': (-46.354,-72.013,-1.967)
C5': (-46.874,-73.315,-5.222)
O4': (-47.116,-72.698,-2.909)
C8: (-44.982,-74.110,-1.878)
O2': (-46.483,-69.793,-2.753)
C6: (-43.590,-74.336,1.313)
C5: (-44.211,-74.102,0.089)
C4: (-44.961,-72.973,-0.034)
P: (-45.323,-75.100,-6.249)
C4': (-46.825,-72.194,-4.231)
C2': (-45.626,-70.911,-2.703)
C2: (-44.512,-72.414,2.032)
N1: (-43.756,-73.462,2.295)
N3: (-45.133,-72.073,0.925)
N6: (-42.834,-75.392,1.551)
N7: (-44.230,-74.818,-1.085)
N9: (-45.447,-72.972,-1.324)
O5': (-45.752,-74.150,-5.090)
O3': (-45.259,-70.544,-5.080)
OP2: (-43.997,-75.658,-5.973)
C3': (-45.490,-71.508,-4.074)
C1': (-46.354,-72.013,-1.967)
C5': (-46.874,-73.315,-5.222)
O4': (-47.116,-72.698,-2.909)
C8: (-44.982,-74.110,-1.878)
O2': (-46.483,-69.793,-2.753)
C6: (-43.590,-74.336,1.313)
C5: (-44.211,-74.102,0.089)
C4: (-44.961,-72.973,-0.034)
P: (-45.323,-75.100,-6.249)
C4': (-46.825,-72.194,-4.231)
C2': (-45.626,-70.911,-2.703)
C2: (-44.512,-72.414,2.032)
N1: (-43.756,-73.462,2.295)
N3: (-45.133,-72.073,0.925)
N6: (-42.834,-75.392,1.551)
N7: (-44.230,-74.818,-1.085)
N9: (-45.447,-72.972,-1.324)
O5': (-45.752,-74.150,-5.090)
O3': (-45.259,-70.544,-5.080)
OP1: (-37.235,-80.342,7.588)
OP2: (-37.383,-81.779,5.539)
C3': (-41.281,-78.351,5.491)
C1': (-40.646,-77.432,3.450)
C5': (-38.885,-78.397,6.369)
O6: (-40.843,-81.686,-0.645)
O4': (-39.547,-77.386,4.303)
C8: (-39.671,-79.603,2.826)
C2: (-42.448,-78.618,-0.251)
C6: (-41.145,-80.608,-0.147)
C5: (-40.672,-80.036,1.030)
C4: (-41.124,-78.840,1.433)
P: (-37.313,-80.445,6.150)
C4': (-39.961,-77.639,5.656)
C2': (-41.869,-77.615,4.323)
O2': (-42.312,-76.347,4.722)
N1: (-42.057,-79.802,-0.750)
N2: (-43.354,-77.980,-0.969)
N3: (-42.013,-78.071,0.850)
N7: (-39.757,-80.511,1.918)
N9: (-40.472,-78.566,2.571)
O5': (-38.473,-79.529,5.625)
O3': (-42.084,-78.299,6.648)
OP2: (-37.383,-81.779,5.539)
C3': (-41.281,-78.351,5.491)
C1': (-40.646,-77.432,3.450)
C5': (-38.885,-78.397,6.369)
O6: (-40.843,-81.686,-0.645)
O4': (-39.547,-77.386,4.303)
C8: (-39.671,-79.603,2.826)
C2: (-42.448,-78.618,-0.251)
C6: (-41.145,-80.608,-0.147)
C5: (-40.672,-80.036,1.030)
C4: (-41.124,-78.840,1.433)
P: (-37.313,-80.445,6.150)
C4': (-39.961,-77.639,5.656)
C2': (-41.869,-77.615,4.323)
O2': (-42.312,-76.347,4.722)
N1: (-42.057,-79.802,-0.750)
N2: (-43.354,-77.980,-0.969)
N3: (-42.013,-78.071,0.850)
N7: (-39.757,-80.511,1.918)
N9: (-40.472,-78.566,2.571)
O5': (-38.473,-79.529,5.625)
O3': (-42.084,-78.299,6.648)
Image (generated by PyMOL):