Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0203:0213
Extra
PDB:
ATOM 1 O3' U A 202 62.085 85.967 42.523 1.00 33.69 O
ATOM 2 P A A 203 63.338 85.751 43.491 1.00 35.88 P
ATOM 3 OP1 A A 203 63.385 84.326 43.878 1.00 34.78 O
ATOM 4 OP2 A A 203 63.278 86.800 44.543 1.00 38.10 O
ATOM 5 O5' A A 203 64.596 86.044 42.562 1.00 38.71 O
ATOM 6 C5' A A 203 64.862 85.236 41.408 1.00 37.14 C
ATOM 7 C4' A A 203 65.871 85.913 40.519 1.00 36.76 C
ATOM 8 O4' A A 203 65.308 87.141 39.987 1.00 38.84 O
ATOM 9 C3' A A 203 67.149 86.385 41.187 1.00 36.53 C
ATOM 10 O3' A A 203 68.081 85.340 41.396 1.00 36.22 O
ATOM 11 C2' A A 203 67.664 87.407 40.184 1.00 38.83 C
ATOM 12 O2' A A 203 68.302 86.817 39.066 1.00 39.75 O
ATOM 13 C1' A A 203 66.357 88.066 39.733 1.00 39.88 C
ATOM 14 N9 A A 203 66.083 89.319 40.444 1.00 42.04 N
ATOM 15 C8 A A 203 65.072 89.618 41.330 1.00 42.14 C
ATOM 16 N7 A A 203 65.127 90.840 41.802 1.00 41.62 N
ATOM 17 C5 A A 203 66.244 91.388 41.184 1.00 43.18 C
ATOM 18 C6 A A 203 66.852 92.659 41.266 1.00 43.18 C
ATOM 19 N6 A A 203 66.401 93.652 42.036 1.00 41.22 N
ATOM 20 N1 A A 203 67.959 92.874 40.518 1.00 42.99 N
ATOM 21 C2 A A 203 68.418 91.881 39.748 1.00 42.14 C
ATOM 22 N3 A A 203 67.939 90.651 39.586 1.00 43.36 N
ATOM 23 C4 A A 203 66.839 90.465 40.341 1.00 42.91 C
ATOM 24 P A A 204 68.981 85.348 42.721 1.00 38.03 P
ATOM 25 OP1 A A 204 69.987 84.251 42.657 1.00 33.62 O
ATOM 26 OP2 A A 204 68.050 85.436 43.874 1.00 36.64 O
ATOM 27 O5' A A 204 69.744 86.743 42.652 1.00 38.09 O
TER
ATOM 1 O3' U B 212 66.640 100.638 47.914 1.00 30.26 O
ATOM 2 P G B 213 65.534 100.901 46.782 1.00 33.79 P
ATOM 3 OP1 G B 213 65.898 102.174 46.107 1.00 31.70 O
ATOM 4 OP2 G B 213 64.180 100.739 47.388 1.00 33.36 O
ATOM 5 O5' G B 213 65.752 99.723 45.738 1.00 32.20 O
ATOM 6 C5' G B 213 66.935 99.664 44.932 1.00 32.29 C
ATOM 7 C4' G B 213 66.882 98.460 44.032 1.00 32.86 C
ATOM 8 O4' G B 213 67.014 97.253 44.826 1.00 32.76 O
ATOM 9 C3' G B 213 65.573 98.273 43.281 1.00 31.47 C
ATOM 10 O3' G B 213 65.511 99.071 42.110 1.00 30.29 O
ATOM 11 C2' G B 213 65.606 96.789 42.978 1.00 32.70 C
ATOM 12 O2' G B 213 66.497 96.504 41.927 1.00 36.29 O
ATOM 13 C1' G B 213 66.183 96.240 44.285 1.00 34.97 C
ATOM 14 N9 G B 213 65.121 95.956 45.246 1.00 37.61 N
ATOM 15 C8 G B 213 64.676 96.771 46.260 1.00 38.01 C
ATOM 16 N7 G B 213 63.679 96.258 46.927 1.00 39.01 N
ATOM 17 C5 G B 213 63.461 95.026 46.327 1.00 38.75 C
ATOM 18 C6 G B 213 62.518 94.020 46.625 1.00 38.97 C
ATOM 19 O6 G B 213 61.656 94.015 47.505 1.00 39.29 O
ATOM 20 N1 G B 213 62.646 92.929 45.774 1.00 38.91 N
ATOM 21 C2 G B 213 63.568 92.820 44.766 1.00 38.29 C
ATOM 22 N2 G B 213 63.540 91.688 44.050 1.00 35.86 N
ATOM 23 N3 G B 213 64.456 93.753 44.479 1.00 38.84 N
ATOM 24 C4 G B 213 64.346 94.821 45.294 1.00 38.30 C
ATOM 25 P A B 214 64.097 99.315 41.380 1.00 32.93 P
ATOM 26 OP1 A B 214 64.310 100.414 40.402 1.00 33.23 O
ATOM 27 OP2 A B 214 63.023 99.455 42.398 1.00 29.57 O
ATOM 28 O5' A B 214 63.870 97.943 40.594 1.00 31.19 O
TER
ATOM 2 P A A 203 63.338 85.751 43.491 1.00 35.88 P
ATOM 3 OP1 A A 203 63.385 84.326 43.878 1.00 34.78 O
ATOM 4 OP2 A A 203 63.278 86.800 44.543 1.00 38.10 O
ATOM 5 O5' A A 203 64.596 86.044 42.562 1.00 38.71 O
ATOM 6 C5' A A 203 64.862 85.236 41.408 1.00 37.14 C
ATOM 7 C4' A A 203 65.871 85.913 40.519 1.00 36.76 C
ATOM 8 O4' A A 203 65.308 87.141 39.987 1.00 38.84 O
ATOM 9 C3' A A 203 67.149 86.385 41.187 1.00 36.53 C
ATOM 10 O3' A A 203 68.081 85.340 41.396 1.00 36.22 O
ATOM 11 C2' A A 203 67.664 87.407 40.184 1.00 38.83 C
ATOM 12 O2' A A 203 68.302 86.817 39.066 1.00 39.75 O
ATOM 13 C1' A A 203 66.357 88.066 39.733 1.00 39.88 C
ATOM 14 N9 A A 203 66.083 89.319 40.444 1.00 42.04 N
ATOM 15 C8 A A 203 65.072 89.618 41.330 1.00 42.14 C
ATOM 16 N7 A A 203 65.127 90.840 41.802 1.00 41.62 N
ATOM 17 C5 A A 203 66.244 91.388 41.184 1.00 43.18 C
ATOM 18 C6 A A 203 66.852 92.659 41.266 1.00 43.18 C
ATOM 19 N6 A A 203 66.401 93.652 42.036 1.00 41.22 N
ATOM 20 N1 A A 203 67.959 92.874 40.518 1.00 42.99 N
ATOM 21 C2 A A 203 68.418 91.881 39.748 1.00 42.14 C
ATOM 22 N3 A A 203 67.939 90.651 39.586 1.00 43.36 N
ATOM 23 C4 A A 203 66.839 90.465 40.341 1.00 42.91 C
ATOM 24 P A A 204 68.981 85.348 42.721 1.00 38.03 P
ATOM 25 OP1 A A 204 69.987 84.251 42.657 1.00 33.62 O
ATOM 26 OP2 A A 204 68.050 85.436 43.874 1.00 36.64 O
ATOM 27 O5' A A 204 69.744 86.743 42.652 1.00 38.09 O
TER
ATOM 1 O3' U B 212 66.640 100.638 47.914 1.00 30.26 O
ATOM 2 P G B 213 65.534 100.901 46.782 1.00 33.79 P
ATOM 3 OP1 G B 213 65.898 102.174 46.107 1.00 31.70 O
ATOM 4 OP2 G B 213 64.180 100.739 47.388 1.00 33.36 O
ATOM 5 O5' G B 213 65.752 99.723 45.738 1.00 32.20 O
ATOM 6 C5' G B 213 66.935 99.664 44.932 1.00 32.29 C
ATOM 7 C4' G B 213 66.882 98.460 44.032 1.00 32.86 C
ATOM 8 O4' G B 213 67.014 97.253 44.826 1.00 32.76 O
ATOM 9 C3' G B 213 65.573 98.273 43.281 1.00 31.47 C
ATOM 10 O3' G B 213 65.511 99.071 42.110 1.00 30.29 O
ATOM 11 C2' G B 213 65.606 96.789 42.978 1.00 32.70 C
ATOM 12 O2' G B 213 66.497 96.504 41.927 1.00 36.29 O
ATOM 13 C1' G B 213 66.183 96.240 44.285 1.00 34.97 C
ATOM 14 N9 G B 213 65.121 95.956 45.246 1.00 37.61 N
ATOM 15 C8 G B 213 64.676 96.771 46.260 1.00 38.01 C
ATOM 16 N7 G B 213 63.679 96.258 46.927 1.00 39.01 N
ATOM 17 C5 G B 213 63.461 95.026 46.327 1.00 38.75 C
ATOM 18 C6 G B 213 62.518 94.020 46.625 1.00 38.97 C
ATOM 19 O6 G B 213 61.656 94.015 47.505 1.00 39.29 O
ATOM 20 N1 G B 213 62.646 92.929 45.774 1.00 38.91 N
ATOM 21 C2 G B 213 63.568 92.820 44.766 1.00 38.29 C
ATOM 22 N2 G B 213 63.540 91.688 44.050 1.00 35.86 N
ATOM 23 N3 G B 213 64.456 93.753 44.479 1.00 38.84 N
ATOM 24 C4 G B 213 64.346 94.821 45.294 1.00 38.30 C
ATOM 25 P A B 214 64.097 99.315 41.380 1.00 32.93 P
ATOM 26 OP1 A B 214 64.310 100.414 40.402 1.00 33.23 O
ATOM 27 OP2 A B 214 63.023 99.455 42.398 1.00 29.57 O
ATOM 28 O5' A B 214 63.870 97.943 40.594 1.00 31.19 O
TER
Atoms:
OP1: (63.385,84.326,43.878)
OP2: (63.278,86.800,44.543)
C3': (67.149,86.385,41.187)
C1': (66.357,88.066,39.733)
C5': (64.862,85.236,41.408)
O4': (65.308,87.141,39.987)
C8: (65.072,89.618,41.330)
O2': (68.302,86.817,39.066)
C6: (66.852,92.659,41.266)
C5: (66.244,91.388,41.184)
C4: (66.839,90.465,40.341)
P: (63.338,85.751,43.491)
C4': (65.871,85.913,40.519)
C2': (67.664,87.407,40.184)
C2: (68.418,91.881,39.748)
N1: (67.959,92.874,40.518)
N3: (67.939,90.651,39.586)
N6: (66.401,93.652,42.036)
N7: (65.127,90.840,41.802)
N9: (66.083,89.319,40.444)
O5': (64.596,86.044,42.562)
O3': (68.081,85.340,41.396)
OP2: (63.278,86.800,44.543)
C3': (67.149,86.385,41.187)
C1': (66.357,88.066,39.733)
C5': (64.862,85.236,41.408)
O4': (65.308,87.141,39.987)
C8: (65.072,89.618,41.330)
O2': (68.302,86.817,39.066)
C6: (66.852,92.659,41.266)
C5: (66.244,91.388,41.184)
C4: (66.839,90.465,40.341)
P: (63.338,85.751,43.491)
C4': (65.871,85.913,40.519)
C2': (67.664,87.407,40.184)
C2: (68.418,91.881,39.748)
N1: (67.959,92.874,40.518)
N3: (67.939,90.651,39.586)
N6: (66.401,93.652,42.036)
N7: (65.127,90.840,41.802)
N9: (66.083,89.319,40.444)
O5': (64.596,86.044,42.562)
O3': (68.081,85.340,41.396)
OP1: (65.898,102.174,46.107)
OP2: (64.180,100.739,47.388)
C3': (65.573,98.273,43.281)
C1': (66.183,96.240,44.285)
C5': (66.935,99.664,44.932)
O6: (61.656,94.015,47.505)
O4': (67.014,97.253,44.826)
C8: (64.676,96.771,46.260)
C2: (63.568,92.820,44.766)
C6: (62.518,94.020,46.625)
C5: (63.461,95.026,46.327)
C4: (64.346,94.821,45.294)
P: (65.534,100.901,46.782)
C4': (66.882,98.460,44.032)
C2': (65.606,96.789,42.978)
O2': (66.497,96.504,41.927)
N1: (62.646,92.929,45.774)
N2: (63.540,91.688,44.050)
N3: (64.456,93.753,44.479)
N7: (63.679,96.258,46.927)
N9: (65.121,95.956,45.246)
O5': (65.752,99.723,45.738)
O3': (65.511,99.071,42.110)
OP2: (64.180,100.739,47.388)
C3': (65.573,98.273,43.281)
C1': (66.183,96.240,44.285)
C5': (66.935,99.664,44.932)
O6: (61.656,94.015,47.505)
O4': (67.014,97.253,44.826)
C8: (64.676,96.771,46.260)
C2: (63.568,92.820,44.766)
C6: (62.518,94.020,46.625)
C5: (63.461,95.026,46.327)
C4: (64.346,94.821,45.294)
P: (65.534,100.901,46.782)
C4': (66.882,98.460,44.032)
C2': (65.606,96.789,42.978)
O2': (66.497,96.504,41.927)
N1: (62.646,92.929,45.774)
N2: (63.540,91.688,44.050)
N3: (64.456,93.753,44.479)
N7: (63.679,96.258,46.927)
N9: (65.121,95.956,45.246)
O5': (65.752,99.723,45.738)
O3': (65.511,99.071,42.110)
Image (generated by PyMOL):