ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VPL:D35:D9

Extra

PDB:
ATOM 1 O3' A A 34 26.975 46.146 19.975 1.00 58.30 O
ATOM 2 P A A 35 26.635 47.282 18.909 1.00 55.72 P
ATOM 3 OP1 A A 35 27.728 48.279 18.935 1.00 61.83 O
ATOM 4 OP2 A A 35 25.239 47.695 19.172 1.00 46.88 O
ATOM 5 O5' A A 35 26.728 46.508 17.518 1.00 44.62 O
ATOM 6 C5' A A 35 27.931 46.592 16.755 1.00 47.49 C
ATOM 7 C4' A A 35 27.686 46.105 15.338 1.00 24.16 C
ATOM 8 O4' A A 35 26.602 45.143 15.373 1.00 37.34 O
ATOM 9 C3' A A 35 27.113 47.167 14.428 1.00 31.14 C
ATOM 10 O3' A A 35 28.108 48.058 13.927 1.00 35.40 O
ATOM 11 C2' A A 35 26.449 46.318 13.348 1.00 34.44 C
ATOM 12 O2' A A 35 27.395 45.780 12.452 1.00 27.79 O
ATOM 13 C1' A A 35 25.859 45.179 14.170 1.00 33.41 C
ATOM 14 N9 A A 35 24.426 45.203 14.496 1.00 28.09 N
ATOM 15 C8 A A 35 23.880 45.207 15.751 1.00 28.29 C
ATOM 16 N7 A A 35 22.565 45.202 15.776 1.00 32.23 N
ATOM 17 C5 A A 35 22.216 45.175 14.431 1.00 12.69 C
ATOM 18 C6 A A 35 20.967 45.152 13.769 1.00 35.18 C
ATOM 19 N6 A A 35 19.798 45.152 14.415 1.00 27.58 N
ATOM 20 N1 A A 35 20.959 45.117 12.415 1.00 27.59 N
ATOM 21 C2 A A 35 22.134 45.122 11.775 1.00 30.99 C
ATOM 22 N3 A A 35 23.369 45.129 12.284 1.00 30.93 N
ATOM 23 C4 A A 35 23.348 45.155 13.631 1.00 21.48 C
ATOM 24 P C A 36 27.933 49.630 14.184 1.00 36.22 P
ATOM 25 OP1 C A 36 29.082 50.328 13.578 1.00 36.32 O
ATOM 26 OP2 C A 36 27.655 49.833 15.627 1.00 38.32 O
ATOM 27 O5' C A 36 26.575 49.980 13.420 1.00 34.37 O
TER

ATOM 1 O3' G B 8 11.433 47.443 16.765 1.00 46.64 O
ATOM 2 P G B 9 11.198 45.869 16.734 1.00 40.29 P
ATOM 3 OP1 G B 9 9.897 45.657 16.071 1.00 45.17 O
ATOM 4 OP2 G B 9 11.418 45.363 18.107 1.00 59.19 O
ATOM 5 O5' G B 9 12.366 45.241 15.841 1.00 48.44 O
ATOM 6 C5' G B 9 12.745 45.726 14.556 1.00 35.23 C
ATOM 7 C4' G B 9 14.219 45.418 14.345 1.00 39.78 C
ATOM 8 O4' G B 9 14.975 46.083 15.388 1.00 36.19 O
ATOM 9 C3' G B 9 14.683 43.968 14.462 1.00 41.30 C
ATOM 10 O3' G B 9 14.493 43.215 13.264 1.00 41.21 O
ATOM 11 C2' G B 9 16.171 44.182 14.714 1.00 28.92 C
ATOM 12 O2' G B 9 16.907 44.385 13.528 1.00 40.20 O
ATOM 13 C1' G B 9 16.223 45.454 15.543 1.00 27.61 C
ATOM 14 N9 G B 9 16.334 45.138 16.949 1.00 34.88 N
ATOM 15 C8 G B 9 15.289 45.008 17.829 1.00 33.96 C
ATOM 16 N7 G B 9 15.656 44.719 19.032 1.00 35.66 N
ATOM 17 C5 G B 9 17.035 44.651 18.939 1.00 37.75 C
ATOM 18 C6 G B 9 17.962 44.369 19.951 1.00 32.19 C
ATOM 19 O6 G B 9 17.724 44.129 21.144 1.00 55.88 O
ATOM 20 N1 G B 9 19.268 44.412 19.482 1.00 27.01 N
ATOM 21 C2 G B 9 19.613 44.675 18.184 1.00 36.61 C
ATOM 22 N2 G B 9 20.925 44.674 17.935 1.00 31.71 N
ATOM 23 N3 G B 9 18.751 44.940 17.206 1.00 24.31 N
ATOM 24 C4 G B 9 17.478 44.906 17.665 1.00 33.05 C
ATOM 25 P A B 10 13.525 41.945 13.276 1.00 40.96 P
ATOM 26 OP1 A B 10 12.142 42.468 13.195 1.00 47.26 O
ATOM 27 OP2 A B 10 13.937 41.056 14.385 1.00 53.50 O
ATOM 28 O5' A B 10 13.873 41.211 11.899 1.00 49.31 O
TER

Atoms:
OP1: (27.728,48.279,18.935)
OP2: (25.239,47.695,19.172)
C3': (27.113,47.167,14.428)
C1': (25.859,45.179,14.170)
C5': (27.931,46.592,16.755)
O4': (26.602,45.143,15.373)
C8: (23.880,45.207,15.751)
O2': (27.395,45.780,12.452)
C6: (20.967,45.152,13.769)
C5: (22.216,45.175,14.431)
C4: (23.348,45.155,13.631)
P: (26.635,47.282,18.909)
C4': (27.686,46.105,15.338)
C2': (26.449,46.318,13.348)
C2: (22.134,45.122,11.775)
N1: (20.959,45.117,12.415)
N3: (23.369,45.129,12.284)
N6: (19.798,45.152,14.415)
N7: (22.565,45.202,15.776)
N9: (24.426,45.203,14.496)
O5': (26.728,46.508,17.518)
O3': (28.108,48.058,13.927)
OP1: (9.897,45.657,16.071)
OP2: (11.418,45.363,18.107)
C3': (14.683,43.968,14.462)
C1': (16.223,45.454,15.543)
C5': (12.745,45.726,14.556)
O6: (17.724,44.129,21.144)
O4': (14.975,46.083,15.388)
C8: (15.289,45.008,17.829)
C2: (19.613,44.675,18.184)
C6: (17.962,44.369,19.951)
C5: (17.035,44.651,18.939)
C4: (17.478,44.906,17.665)
P: (11.198,45.869,16.734)
C4': (14.219,45.418,14.345)
C2': (16.171,44.182,14.714)
O2': (16.907,44.385,13.528)
N1: (19.268,44.412,19.482)
N2: (20.925,44.674,17.935)
N3: (18.751,44.940,17.206)
N7: (15.656,44.719,19.032)
N9: (16.334,45.138,16.949)
O5': (12.366,45.241,15.841)
O3': (14.493,43.215,13.264)
Image (generated by PyMOL):
PyMOL image
show in jmol