Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:9104:975
Extra
PDB:
ATOM 1 O3' A A 103 52.027 57.027 116.983 1.00 47.23 O
ATOM 2 P A A 104 52.034 55.751 117.950 1.00 47.13 P
ATOM 3 OP1 A A 104 52.750 54.674 117.217 1.00 46.72 O
ATOM 4 OP2 A A 104 50.647 55.523 118.432 1.00 45.88 O
ATOM 5 O5' A A 104 52.896 56.227 119.202 1.00 45.51 O
ATOM 6 C5' A A 104 54.247 56.677 119.026 1.00 47.20 C
ATOM 7 C4' A A 104 54.775 57.271 120.304 1.00 48.27 C
ATOM 8 O4' A A 104 53.926 58.369 120.710 1.00 48.95 O
ATOM 9 C3' A A 104 54.773 56.365 121.518 1.00 50.04 C
ATOM 10 O3' A A 104 55.883 55.481 121.513 1.00 53.04 O
ATOM 11 C2' A A 104 54.840 57.368 122.659 1.00 49.14 C
ATOM 12 O2' A A 104 56.136 57.889 122.870 1.00 52.57 O
ATOM 13 C1' A A 104 53.940 58.479 122.124 1.00 48.85 C
ATOM 14 N9 A A 104 52.570 58.374 122.617 1.00 49.03 N
ATOM 15 C8 A A 104 51.485 57.768 122.030 1.00 48.30 C
ATOM 16 N7 A A 104 50.387 57.847 122.743 1.00 48.37 N
ATOM 17 C5 A A 104 50.774 58.552 123.876 1.00 48.99 C
ATOM 18 C6 A A 104 50.071 58.966 125.022 1.00 48.79 C
ATOM 19 N6 A A 104 48.776 58.729 125.221 1.00 49.53 N
ATOM 20 N1 A A 104 50.755 59.645 125.969 1.00 48.85 N
ATOM 21 C2 A A 104 52.054 59.890 125.768 1.00 49.37 C
ATOM 22 N3 A A 104 52.826 59.559 124.732 1.00 50.19 N
ATOM 23 C4 A A 104 52.116 58.883 123.810 1.00 49.66 C
ATOM 24 P U A 105 55.687 53.958 121.987 1.00 55.61 P
ATOM 25 OP1 U A 105 57.044 53.352 122.022 1.00 56.24 O
ATOM 26 OP2 U A 105 54.612 53.312 121.185 1.00 53.54 O
ATOM 27 O5' U A 105 55.149 54.092 123.477 1.00 56.69 O
TER
ATOM 1 O3' G B 74 40.809 56.888 129.464 1.00 63.53 O
ATOM 2 P G B 75 40.837 58.361 128.818 1.00 62.97 P
ATOM 3 OP1 G B 75 40.518 59.337 129.885 1.00 62.96 O
ATOM 4 OP2 G B 75 40.024 58.342 127.572 1.00 63.49 O
ATOM 5 O5' G B 75 42.359 58.577 128.408 1.00 62.82 O
ATOM 6 C5' G B 75 43.368 58.833 129.400 1.00 62.24 C
ATOM 7 C4' G B 75 44.707 59.040 128.734 1.00 62.33 C
ATOM 8 O4' G B 75 45.021 57.860 127.947 1.00 61.18 O
ATOM 9 C3' G B 75 44.781 60.180 127.728 1.00 62.67 C
ATOM 10 O3' G B 75 44.995 61.441 128.362 1.00 64.62 O
ATOM 11 C2' G B 75 45.945 59.741 126.851 1.00 62.38 C
ATOM 12 O2' G B 75 47.201 59.941 127.471 1.00 62.29 O
ATOM 13 C1' G B 75 45.679 58.239 126.751 1.00 60.36 C
ATOM 14 N9 G B 75 44.813 57.886 125.629 1.00 58.70 N
ATOM 15 C8 G B 75 43.443 57.773 125.642 1.00 58.65 C
ATOM 16 N7 G B 75 42.946 57.413 124.489 1.00 58.77 N
ATOM 17 C5 G B 75 44.055 57.283 123.663 1.00 57.97 C
ATOM 18 C6 G B 75 44.147 56.896 122.302 1.00 57.24 C
ATOM 19 O6 G B 75 43.240 56.562 121.530 1.00 57.58 O
ATOM 20 N1 G B 75 45.463 56.912 121.856 1.00 56.26 N
ATOM 21 C2 G B 75 46.552 57.245 122.618 1.00 55.61 C
ATOM 22 N2 G B 75 47.739 57.210 122.000 1.00 54.47 N
ATOM 23 N3 G B 75 46.484 57.589 123.891 1.00 56.30 N
ATOM 24 C4 G B 75 45.214 57.587 124.346 1.00 57.86 C
ATOM 25 P A B 76 44.987 62.800 127.489 1.00 65.46 P
ATOM 26 OP1 A B 76 45.548 62.501 126.140 1.00 65.36 O
ATOM 27 OP2 A B 76 45.605 63.866 128.322 1.00 66.46 O
ATOM 28 O5' A B 76 43.452 63.189 127.332 1.00 61.50 O
TER
ATOM 2 P A A 104 52.034 55.751 117.950 1.00 47.13 P
ATOM 3 OP1 A A 104 52.750 54.674 117.217 1.00 46.72 O
ATOM 4 OP2 A A 104 50.647 55.523 118.432 1.00 45.88 O
ATOM 5 O5' A A 104 52.896 56.227 119.202 1.00 45.51 O
ATOM 6 C5' A A 104 54.247 56.677 119.026 1.00 47.20 C
ATOM 7 C4' A A 104 54.775 57.271 120.304 1.00 48.27 C
ATOM 8 O4' A A 104 53.926 58.369 120.710 1.00 48.95 O
ATOM 9 C3' A A 104 54.773 56.365 121.518 1.00 50.04 C
ATOM 10 O3' A A 104 55.883 55.481 121.513 1.00 53.04 O
ATOM 11 C2' A A 104 54.840 57.368 122.659 1.00 49.14 C
ATOM 12 O2' A A 104 56.136 57.889 122.870 1.00 52.57 O
ATOM 13 C1' A A 104 53.940 58.479 122.124 1.00 48.85 C
ATOM 14 N9 A A 104 52.570 58.374 122.617 1.00 49.03 N
ATOM 15 C8 A A 104 51.485 57.768 122.030 1.00 48.30 C
ATOM 16 N7 A A 104 50.387 57.847 122.743 1.00 48.37 N
ATOM 17 C5 A A 104 50.774 58.552 123.876 1.00 48.99 C
ATOM 18 C6 A A 104 50.071 58.966 125.022 1.00 48.79 C
ATOM 19 N6 A A 104 48.776 58.729 125.221 1.00 49.53 N
ATOM 20 N1 A A 104 50.755 59.645 125.969 1.00 48.85 N
ATOM 21 C2 A A 104 52.054 59.890 125.768 1.00 49.37 C
ATOM 22 N3 A A 104 52.826 59.559 124.732 1.00 50.19 N
ATOM 23 C4 A A 104 52.116 58.883 123.810 1.00 49.66 C
ATOM 24 P U A 105 55.687 53.958 121.987 1.00 55.61 P
ATOM 25 OP1 U A 105 57.044 53.352 122.022 1.00 56.24 O
ATOM 26 OP2 U A 105 54.612 53.312 121.185 1.00 53.54 O
ATOM 27 O5' U A 105 55.149 54.092 123.477 1.00 56.69 O
TER
ATOM 1 O3' G B 74 40.809 56.888 129.464 1.00 63.53 O
ATOM 2 P G B 75 40.837 58.361 128.818 1.00 62.97 P
ATOM 3 OP1 G B 75 40.518 59.337 129.885 1.00 62.96 O
ATOM 4 OP2 G B 75 40.024 58.342 127.572 1.00 63.49 O
ATOM 5 O5' G B 75 42.359 58.577 128.408 1.00 62.82 O
ATOM 6 C5' G B 75 43.368 58.833 129.400 1.00 62.24 C
ATOM 7 C4' G B 75 44.707 59.040 128.734 1.00 62.33 C
ATOM 8 O4' G B 75 45.021 57.860 127.947 1.00 61.18 O
ATOM 9 C3' G B 75 44.781 60.180 127.728 1.00 62.67 C
ATOM 10 O3' G B 75 44.995 61.441 128.362 1.00 64.62 O
ATOM 11 C2' G B 75 45.945 59.741 126.851 1.00 62.38 C
ATOM 12 O2' G B 75 47.201 59.941 127.471 1.00 62.29 O
ATOM 13 C1' G B 75 45.679 58.239 126.751 1.00 60.36 C
ATOM 14 N9 G B 75 44.813 57.886 125.629 1.00 58.70 N
ATOM 15 C8 G B 75 43.443 57.773 125.642 1.00 58.65 C
ATOM 16 N7 G B 75 42.946 57.413 124.489 1.00 58.77 N
ATOM 17 C5 G B 75 44.055 57.283 123.663 1.00 57.97 C
ATOM 18 C6 G B 75 44.147 56.896 122.302 1.00 57.24 C
ATOM 19 O6 G B 75 43.240 56.562 121.530 1.00 57.58 O
ATOM 20 N1 G B 75 45.463 56.912 121.856 1.00 56.26 N
ATOM 21 C2 G B 75 46.552 57.245 122.618 1.00 55.61 C
ATOM 22 N2 G B 75 47.739 57.210 122.000 1.00 54.47 N
ATOM 23 N3 G B 75 46.484 57.589 123.891 1.00 56.30 N
ATOM 24 C4 G B 75 45.214 57.587 124.346 1.00 57.86 C
ATOM 25 P A B 76 44.987 62.800 127.489 1.00 65.46 P
ATOM 26 OP1 A B 76 45.548 62.501 126.140 1.00 65.36 O
ATOM 27 OP2 A B 76 45.605 63.866 128.322 1.00 66.46 O
ATOM 28 O5' A B 76 43.452 63.189 127.332 1.00 61.50 O
TER
Atoms:
OP1: (52.750,54.674,117.217)
OP2: (50.647,55.523,118.432)
C3': (54.773,56.365,121.518)
C1': (53.940,58.479,122.124)
C5': (54.247,56.677,119.026)
O4': (53.926,58.369,120.710)
C8: (51.485,57.768,122.030)
O2': (56.136,57.889,122.870)
C6: (50.071,58.966,125.022)
C5: (50.774,58.552,123.876)
C4: (52.116,58.883,123.810)
P: (52.034,55.751,117.950)
C4': (54.775,57.271,120.304)
C2': (54.840,57.368,122.659)
C2: (52.054,59.890,125.768)
N1: (50.755,59.645,125.969)
N3: (52.826,59.559,124.732)
N6: (48.776,58.729,125.221)
N7: (50.387,57.847,122.743)
N9: (52.570,58.374,122.617)
O5': (52.896,56.227,119.202)
O3': (55.883,55.481,121.513)
OP2: (50.647,55.523,118.432)
C3': (54.773,56.365,121.518)
C1': (53.940,58.479,122.124)
C5': (54.247,56.677,119.026)
O4': (53.926,58.369,120.710)
C8: (51.485,57.768,122.030)
O2': (56.136,57.889,122.870)
C6: (50.071,58.966,125.022)
C5: (50.774,58.552,123.876)
C4: (52.116,58.883,123.810)
P: (52.034,55.751,117.950)
C4': (54.775,57.271,120.304)
C2': (54.840,57.368,122.659)
C2: (52.054,59.890,125.768)
N1: (50.755,59.645,125.969)
N3: (52.826,59.559,124.732)
N6: (48.776,58.729,125.221)
N7: (50.387,57.847,122.743)
N9: (52.570,58.374,122.617)
O5': (52.896,56.227,119.202)
O3': (55.883,55.481,121.513)
OP1: (40.518,59.337,129.885)
OP2: (40.024,58.342,127.572)
C3': (44.781,60.180,127.728)
C1': (45.679,58.239,126.751)
C5': (43.368,58.833,129.400)
O6: (43.240,56.562,121.530)
O4': (45.021,57.860,127.947)
C8: (43.443,57.773,125.642)
C2: (46.552,57.245,122.618)
C6: (44.147,56.896,122.302)
C5: (44.055,57.283,123.663)
C4: (45.214,57.587,124.346)
P: (40.837,58.361,128.818)
C4': (44.707,59.040,128.734)
C2': (45.945,59.741,126.851)
O2': (47.201,59.941,127.471)
N1: (45.463,56.912,121.856)
N2: (47.739,57.210,122.000)
N3: (46.484,57.589,123.891)
N7: (42.946,57.413,124.489)
N9: (44.813,57.886,125.629)
O5': (42.359,58.577,128.408)
O3': (44.995,61.441,128.362)
OP2: (40.024,58.342,127.572)
C3': (44.781,60.180,127.728)
C1': (45.679,58.239,126.751)
C5': (43.368,58.833,129.400)
O6: (43.240,56.562,121.530)
O4': (45.021,57.860,127.947)
C8: (43.443,57.773,125.642)
C2: (46.552,57.245,122.618)
C6: (44.147,56.896,122.302)
C5: (44.055,57.283,123.663)
C4: (45.214,57.587,124.346)
P: (40.837,58.361,128.818)
C4': (44.707,59.040,128.734)
C2': (45.945,59.741,126.851)
O2': (47.201,59.941,127.471)
N1: (45.463,56.912,121.856)
N2: (47.739,57.210,122.000)
N3: (46.484,57.589,123.891)
N7: (42.946,57.413,124.489)
N9: (44.813,57.886,125.629)
O5': (42.359,58.577,128.408)
O3': (44.995,61.441,128.362)
Image (generated by PyMOL):