ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q86:A15:A506

Extra

PDB:
ATOM 1 O3' G A 14 34.671 138.588 67.253 1.00 30.72 O
ATOM 2 P A A 15 35.029 137.857 65.867 1.00 32.33 P
ATOM 3 OP1 A A 15 36.503 137.672 65.751 1.00 31.25 O
ATOM 4 OP2 A A 15 34.301 138.529 64.776 1.00 33.41 O
ATOM 5 O5' A A 15 34.358 136.427 66.061 1.00 32.22 O
ATOM 6 C5' A A 15 34.802 135.541 67.101 1.00 32.20 C
ATOM 7 C4' A A 15 33.620 134.895 67.789 1.00 33.71 C
ATOM 8 O4' A A 15 32.866 135.896 68.523 1.00 36.13 O
ATOM 9 C3' A A 15 32.580 134.248 66.896 1.00 32.59 C
ATOM 10 O3' A A 15 32.983 132.960 66.447 1.00 30.96 O
ATOM 11 C2' A A 15 31.375 134.189 67.822 1.00 34.98 C
ATOM 12 O2' A A 15 31.467 133.149 68.763 1.00 37.76 O
ATOM 13 C1' A A 15 31.502 135.513 68.575 1.00 38.08 C
ATOM 14 N9 A A 15 30.687 136.579 67.985 1.00 42.92 N
ATOM 15 C8 A A 15 31.116 137.718 67.344 1.00 43.96 C
ATOM 16 N7 A A 15 30.140 138.475 66.908 1.00 45.43 N
ATOM 17 C5 A A 15 28.990 137.794 67.289 1.00 45.04 C
ATOM 18 C6 A A 15 27.621 138.073 67.112 1.00 45.29 C
ATOM 19 N6 A A 15 27.160 139.166 66.490 1.00 45.07 N
ATOM 20 N1 A A 15 26.730 137.182 67.602 1.00 44.65 N
ATOM 21 C2 A A 15 27.192 136.095 68.228 1.00 44.26 C
ATOM 22 N3 A A 15 28.448 135.725 68.460 1.00 44.74 N
ATOM 23 C4 A A 15 29.311 136.627 67.958 1.00 44.31 C
ATOM 24 P U A 16 32.544 132.453 64.981 1.00 31.41 P
ATOM 25 OP1 U A 16 32.920 131.022 64.824 1.00 28.55 O
ATOM 26 OP2 U A 16 33.035 133.448 63.998 1.00 30.77 O
ATOM 27 O5' U A 16 30.956 132.524 65.032 1.00 29.79 O
TER

ATOM 1 O3' U B 505 21.134 141.396 64.886 1.00 36.30 O
ATOM 2 P G B 506 20.880 142.105 66.308 1.00 40.21 P
ATOM 3 OP1 G B 506 19.762 141.361 66.941 1.00 39.87 O
ATOM 4 OP2 G B 506 20.781 143.580 66.143 1.00 37.88 O
ATOM 5 O5' G B 506 22.199 141.792 67.141 1.00 38.97 O
ATOM 6 C5' G B 506 22.702 140.451 67.233 1.00 38.11 C
ATOM 7 C4' G B 506 24.086 140.449 67.823 1.00 35.81 C
ATOM 8 O4' G B 506 25.034 141.028 66.871 1.00 35.29 O
ATOM 9 C3' G B 506 24.231 141.256 69.112 1.00 34.53 C
ATOM 10 O3' G B 506 25.093 140.557 69.996 1.00 34.87 O
ATOM 11 C2' G B 506 24.926 142.523 68.626 1.00 33.98 C
ATOM 12 O2' G B 506 25.656 143.222 69.613 1.00 30.57 O
ATOM 13 C1' G B 506 25.850 141.937 67.564 1.00 34.61 C
ATOM 14 N9 G B 506 26.428 142.914 66.648 1.00 35.06 N
ATOM 15 C8 G B 506 25.854 144.080 66.201 1.00 35.70 C
ATOM 16 N7 G B 506 26.681 144.836 65.533 1.00 36.59 N
ATOM 17 C5 G B 506 27.862 144.107 65.502 1.00 37.99 C
ATOM 18 C6 G B 506 29.132 144.429 64.940 1.00 37.87 C
ATOM 19 O6 G B 506 29.481 145.473 64.370 1.00 37.24 O
ATOM 20 N1 G B 506 30.045 143.391 65.114 1.00 37.69 N
ATOM 21 C2 G B 506 29.778 142.206 65.757 1.00 38.76 C
ATOM 22 N2 G B 506 30.785 141.325 65.822 1.00 39.51 N
ATOM 23 N3 G B 506 28.608 141.903 66.298 1.00 38.43 N
ATOM 24 C4 G B 506 27.705 142.894 66.142 1.00 37.10 C
ATOM 25 P A B 507 24.824 140.600 71.579 1.00 36.11 P
ATOM 26 OP1 A B 507 23.384 140.854 71.843 1.00 35.11 O
ATOM 27 OP2 A B 507 25.839 141.505 72.168 1.00 34.01 O
ATOM 28 O5' A B 507 25.151 139.109 72.029 1.00 35.85 O
TER

Atoms:
OP1: (36.503,137.672,65.751)
OP2: (34.301,138.529,64.776)
C3': (32.580,134.248,66.896)
C1': (31.502,135.513,68.575)
C5': (34.802,135.541,67.101)
O4': (32.866,135.896,68.523)
C8: (31.116,137.718,67.344)
O2': (31.467,133.149,68.763)
C6: (27.621,138.073,67.112)
C5: (28.990,137.794,67.289)
C4: (29.311,136.627,67.958)
P: (35.029,137.857,65.867)
C4': (33.620,134.895,67.789)
C2': (31.375,134.189,67.822)
C2: (27.192,136.095,68.228)
N1: (26.730,137.182,67.602)
N3: (28.448,135.725,68.460)
N6: (27.160,139.166,66.490)
N7: (30.140,138.475,66.908)
N9: (30.687,136.579,67.985)
O5': (34.358,136.427,66.061)
O3': (32.983,132.960,66.447)
OP1: (19.762,141.361,66.941)
OP2: (20.781,143.580,66.143)
C3': (24.231,141.256,69.112)
C1': (25.850,141.937,67.564)
C5': (22.702,140.451,67.233)
O6: (29.481,145.473,64.370)
O4': (25.034,141.028,66.871)
C8: (25.854,144.080,66.201)
C2: (29.778,142.206,65.757)
C6: (29.132,144.429,64.940)
C5: (27.862,144.107,65.502)
C4: (27.705,142.894,66.142)
P: (20.880,142.105,66.308)
C4': (24.086,140.449,67.823)
C2': (24.926,142.523,68.626)
O2': (25.656,143.222,69.613)
N1: (30.045,143.391,65.114)
N2: (30.785,141.325,65.822)
N3: (28.608,141.903,66.298)
N7: (26.681,144.836,65.533)
N9: (26.428,142.914,66.648)
O5': (22.199,141.792,67.141)
O3': (25.093,140.557,69.996)
Image (generated by PyMOL):
PyMOL image
show in jmol