ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: HH_tran: HH_tran
Program used: JS
Has errors: False

Source

PDB id: SPEC:A7:B7

Extra

PDB:
ATOM 1 O3' G A 6 95.200 194.479 64.672 1.00 43.59 O
ATOM 2 P G A 7 96.476 193.753 64.042 1.00 44.30 P
ATOM 3 OP1 G A 7 97.305 193.159 65.116 1.00 44.72 O
ATOM 4 OP2 G A 7 97.282 194.713 63.257 1.00 43.65 O
ATOM 5 O5' G A 7 95.807 192.642 63.102 1.00 39.95 O
ATOM 6 C5' G A 7 95.449 191.333 63.601 1.00 37.03 C
ATOM 7 C4' G A 7 94.651 190.554 62.550 1.00 37.70 C
ATOM 8 O4' G A 7 93.413 191.229 62.239 1.00 36.54 O
ATOM 9 C3' G A 7 95.418 190.427 61.234 1.00 37.21 C
ATOM 10 O3' G A 7 96.328 189.300 61.270 1.00 36.35 O
ATOM 11 C2' G A 7 94.261 190.170 60.270 1.00 34.97 C
ATOM 12 O2' G A 7 93.834 188.810 60.286 1.00 35.30 O
ATOM 13 C1' G A 7 93.159 191.077 60.821 1.00 34.71 C
ATOM 14 N9 G A 7 93.115 192.398 60.157 1.00 32.72 N
ATOM 15 C8 G A 7 93.458 193.633 60.658 1.00 30.97 C
ATOM 16 N7 G A 7 93.296 194.597 59.833 1.00 30.00 N
ATOM 17 C5 G A 7 92.823 194.009 58.694 1.00 29.55 C
ATOM 18 C6 G A 7 92.452 194.597 57.419 1.00 29.13 C
ATOM 19 O6 G A 7 92.470 195.773 57.066 1.00 28.71 O
ATOM 20 N1 G A 7 92.031 193.608 56.527 1.00 30.31 N
ATOM 21 C2 G A 7 91.968 192.269 56.801 1.00 29.96 C
ATOM 22 N2 G A 7 91.541 191.438 55.811 1.00 32.13 N
ATOM 23 N3 G A 7 92.294 191.747 57.952 1.00 30.48 N
ATOM 24 C4 G A 7 92.717 192.645 58.877 1.00 28.75 C
ATOM 25 H5'1 G A 7 94.837 191.470 64.476 1.00 0.00 H
ATOM 26 H5'2 G A 7 96.361 190.809 63.826 1.00 0.00 H
ATOM 27 H4' G A 7 94.396 189.579 62.930 1.00 0.00 H
ATOM 28 H3' G A 7 95.939 191.332 60.973 1.00 0.00 H
ATOM 29 H1' G A 7 92.199 190.639 60.635 1.00 0.00 H
ATOM 30 H2' G A 7 94.517 190.396 59.254 1.00 0.00 H
ATOM 31 HO'2 G A 7 93.641 188.551 61.190 1.00 0.00 H
ATOM 32 H8 G A 7 93.823 193.746 61.658 1.00 0.00 H
ATOM 33 H1 G A 7 91.762 193.931 55.623 1.00 0.00 H
ATOM 34 H21 G A 7 91.483 190.459 55.978 1.00 0.00 H
ATOM 35 H22 G A 7 91.287 191.812 54.924 1.00 0.00 H
ATOM 36 P U A 8 97.664 189.240 60.385 1.00 34.47 P
ATOM 37 OP1 U A 8 98.406 187.991 60.668 1.00 39.78 O
ATOM 38 OP2 U A 8 98.523 190.416 60.643 1.00 31.97 O
ATOM 39 O5' U A 8 97.124 189.281 58.878 1.00 31.99 O
TER
ATOM 67 O3' G B 6 92.279 197.808 54.499 1.00 43.59 O
ATOM 68 P G B 7 93.798 198.208 54.207 1.00 44.30 P
ATOM 69 OP1 G B 7 93.937 198.695 52.816 1.00 44.72 O
ATOM 70 OP2 G B 7 94.688 197.047 54.425 1.00 43.65 O
ATOM 71 O5' G B 7 94.060 199.362 55.287 1.00 39.95 O
ATOM 72 C5' G B 7 93.760 200.750 55.011 1.00 37.03 C
ATOM 73 C4' G B 7 93.916 201.598 56.278 1.00 37.70 C
ATOM 74 O4' G B 7 92.989 201.172 57.300 1.00 36.54 O
ATOM 75 C3' G B 7 95.316 201.468 56.878 1.00 37.21 C
ATOM 76 O3' G B 7 96.236 202.393 56.247 1.00 36.35 O
ATOM 77 C2' G B 7 95.033 201.875 58.323 1.00 34.97 C
ATOM 78 O2' G B 7 94.976 203.290 58.487 1.00 35.30 O
ATOM 79 C1' G B 7 93.658 201.257 58.583 1.00 34.71 C
ATOM 80 N9 G B 7 93.732 199.923 59.218 1.00 32.72 N
ATOM 81 C8 G B 7 93.421 198.690 58.689 1.00 30.97 C
ATOM 82 N7 G B 7 93.575 197.717 59.503 1.00 30.00 N
ATOM 83 C5 G B 7 94.023 198.291 60.659 1.00 29.55 C
ATOM 84 C6 G B 7 94.369 197.690 61.935 1.00 29.13 C
ATOM 85 O6 G B 7 94.330 196.511 62.278 1.00 28.71 O
ATOM 86 N1 G B 7 94.799 198.666 62.836 1.00 30.31 N
ATOM 87 C2 G B 7 94.886 200.005 62.573 1.00 29.96 C
ATOM 88 N2 G B 7 95.336 200.819 63.567 1.00 32.13 N
ATOM 89 N3 G B 7 94.564 200.542 61.427 1.00 30.48 N
ATOM 90 C4 G B 7 94.136 199.658 60.492 1.00 28.75 C
ATOM 91 H5'1 G B 7 92.739 200.806 54.675 1.00 0.00 H
ATOM 92 H5'2 G B 7 94.450 201.090 54.260 1.00 0.00 H
ATOM 93 H4' G B 7 93.697 202.629 56.060 1.00 0.00 H
ATOM 94 H3' G B 7 95.692 200.461 56.832 1.00 0.00 H
ATOM 95 H1' G B 7 93.110 201.864 59.275 1.00 0.00 H
ATOM 96 H2' G B 7 95.784 201.522 59.002 1.00 0.00 H
ATOM 97 HO'2 G B 7 94.346 203.654 57.861 1.00 0.00 H
ATOM 98 H8 G B 7 93.079 198.588 57.680 1.00 0.00 H
ATOM 99 H1 G B 7 95.061 198.330 63.738 1.00 0.00 H
ATOM 100 H21 G B 7 95.411 201.798 63.408 1.00 0.00 H
ATOM 101 H22 G B 7 95.588 200.432 64.449 1.00 0.00 H
ATOM 102 P U B 8 97.811 202.112 56.149 1.00 34.47 P
ATOM 103 OP1 U B 8 98.480 203.212 55.417 1.00 39.78 O
ATOM 104 OP2 U B 8 98.079 200.818 55.483 1.00 31.97 O
ATOM 105 O5' U B 8 98.279 202.045 57.678 1.00 31.99 O
TER
Atoms:
OP1: (97.305,193.159,65.116)
OP2: (97.282,194.713,63.257)
C3': (95.418,190.427,61.234)
H21: (91.483,190.459,55.978)
H22: (91.287,191.812,54.924)
C5': (95.449,191.333,63.601)
O6: (92.470,195.773,57.066)
H2': (94.517,190.396,59.254)
H3': (95.939,191.332,60.973)
O4': (93.413,191.229,62.239)
C8: (93.458,193.633,60.658)
C2: (91.968,192.269,56.801)
N7: (93.296,194.597,59.833)
C6: (92.452,194.597,57.419)
C5: (92.823,194.009,58.694)
C4: (92.717,192.645,58.877)
C1': (93.159,191.077,60.821)
HO'2: (93.641,188.551,61.190)
N9: (93.115,192.398,60.157)
C4': (94.651,190.554,62.550)
C2': (94.261,190.170,60.270)
H5'2: (96.361,190.809,63.826)
O2': (93.834,188.810,60.286)
N1: (92.031,193.608,56.527)
N2: (91.541,191.438,55.811)
N3: (92.294,191.747,57.952)
H1': (92.199,190.639,60.635)
H4': (94.396,189.579,62.930)
H8: (93.823,193.746,61.658)
P: (96.476,193.753,64.042)
H1: (91.762,193.931,55.623)
O5': (95.807,192.642,63.102)
O3': (96.328,189.300,61.270)
H5'1: (94.837,191.470,64.476)
OP1: (93.937,198.695,52.816)
OP2: (94.688,197.047,54.425)
C3': (95.316,201.468,56.878)
H21: (95.411,201.798,63.408)
H22: (95.588,200.432,64.449)
C5': (93.760,200.750,55.011)
O6: (94.330,196.511,62.278)
H2': (95.784,201.522,59.002)
H3': (95.692,200.461,56.832)
O4': (92.989,201.172,57.300)
C8: (93.421,198.690,58.689)
C2: (94.886,200.005,62.573)
N7: (93.575,197.717,59.503)
C6: (94.369,197.690,61.935)
C5: (94.023,198.291,60.659)
C4: (94.136,199.658,60.492)
C1': (93.658,201.257,58.583)
HO'2: (94.346,203.654,57.861)
N9: (93.732,199.923,59.218)
C4': (93.916,201.598,56.278)
C2': (95.033,201.875,58.323)
H5'2: (94.450,201.090,54.260)
O2': (94.976,203.290,58.487)
N1: (94.799,198.666,62.836)
N2: (95.336,200.819,63.567)
N3: (94.564,200.542,61.427)
H1': (93.110,201.864,59.275)
H4': (93.697,202.629,56.060)
H8: (93.079,198.588,57.680)
P: (93.798,198.208,54.207)
H1: (95.061,198.330,63.738)
O5': (94.060,199.362,55.287)
O3': (96.236,202.393,56.247)
H5'1: (92.739,200.806,54.675)
Image (generated by PyMOL):
PyMOL image
show in jmol