Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A579:A552
Extra
PDB:
ATOM 1 O3' C A 578 -99.600 -97.011 4.379 1.00 53.39 O
ATOM 2 P G A 579 -99.386 -95.524 3.823 1.00 57.78 P
ATOM 3 OP1 G A 579 -100.644 -94.782 4.088 1.00 47.10 O
ATOM 4 OP2 G A 579 -98.854 -95.595 2.439 1.00 46.37 O
ATOM 5 O5' G A 579 -98.204 -94.985 4.766 1.00 66.47 O
ATOM 6 C5' G A 579 -98.350 -95.036 6.182 1.00 68.50 C
ATOM 7 C4' G A 579 -97.041 -94.741 6.898 1.00 57.38 C
ATOM 8 O4' G A 579 -96.123 -95.856 6.781 1.00 55.35 O
ATOM 9 C3' G A 579 -96.263 -93.551 6.354 1.00 63.06 C
ATOM 10 O3' G A 579 -96.745 -92.342 6.927 1.00 62.15 O
ATOM 11 C2' G A 579 -94.860 -93.865 6.852 1.00 58.10 C
ATOM 12 O2' G A 579 -94.706 -93.530 8.213 1.00 67.28 O
ATOM 13 C1' G A 579 -94.803 -95.369 6.648 1.00 49.35 C
ATOM 14 N9 G A 579 -94.374 -95.644 5.295 1.00 49.88 N
ATOM 15 C8 G A 579 -95.178 -95.772 4.191 1.00 54.60 C
ATOM 16 N7 G A 579 -94.502 -96.007 3.103 1.00 59.64 N
ATOM 17 C5 G A 579 -93.172 -96.026 3.516 1.00 52.61 C
ATOM 18 C6 G A 579 -91.981 -96.235 2.780 1.00 50.95 C
ATOM 19 O6 G A 579 -91.844 -96.454 1.572 1.00 76.70 O
ATOM 20 N1 G A 579 -90.854 -96.178 3.581 1.00 47.16 N
ATOM 21 C2 G A 579 -90.865 -95.941 4.931 1.00 61.43 C
ATOM 22 N2 G A 579 -89.663 -95.912 5.534 1.00 58.57 N
ATOM 23 N3 G A 579 -91.974 -95.742 5.636 1.00 63.36 N
ATOM 24 C4 G A 579 -93.082 -95.800 4.865 1.00 55.12 C
ATOM 25 P U A 580 -96.669 -90.999 6.061 1.00 39.80 P
ATOM 26 OP1 U A 580 -98.014 -90.375 6.074 1.00 67.09 O
ATOM 27 OP2 U A 580 -96.021 -91.311 4.763 1.00 41.28 O
ATOM 28 O5' U A 580 -95.690 -90.102 6.935 1.00 51.27 O
TER
ATOM 1 O3' C B 551 -87.584 -93.049 8.403 1.00 54.27 O
ATOM 2 P A B 552 -88.331 -94.368 8.889 1.00 46.31 P
ATOM 3 OP1 A B 552 -89.703 -94.307 8.321 1.00 50.33 O
ATOM 4 OP2 A B 552 -88.093 -94.545 10.340 1.00 50.37 O
ATOM 5 O5' A B 552 -87.487 -95.516 8.159 1.00 41.15 O
ATOM 6 C5' A B 552 -86.112 -95.682 8.492 1.00 42.26 C
ATOM 7 C4' A B 552 -85.331 -96.225 7.308 1.00 39.48 C
ATOM 8 O4' A B 552 -85.221 -95.269 6.220 1.00 49.30 O
ATOM 9 C3' A B 552 -83.903 -96.630 7.628 1.00 45.96 C
ATOM 10 O3' A B 552 -83.811 -97.988 7.344 1.00 47.80 O
ATOM 11 C2' A B 552 -83.045 -95.852 6.643 1.00 48.82 C
ATOM 12 O2' A B 552 -81.989 -96.621 6.117 1.00 57.02 O
ATOM 13 C1' A B 552 -84.049 -95.632 5.537 1.00 49.04 C
ATOM 14 N9 A B 552 -83.614 -94.577 4.647 1.00 54.31 N
ATOM 15 C8 A B 552 -83.302 -94.726 3.327 1.00 63.25 C
ATOM 16 N7 A B 552 -82.918 -93.617 2.742 1.00 57.33 N
ATOM 17 C5 A B 552 -82.973 -92.681 3.762 1.00 55.68 C
ATOM 18 C6 A B 552 -82.679 -91.314 3.783 1.00 52.70 C
ATOM 19 N6 A B 552 -82.263 -90.665 2.695 1.00 53.35 N
ATOM 20 N1 A B 552 -82.832 -90.664 4.955 1.00 65.49 N
ATOM 21 C2 A B 552 -83.253 -91.338 6.033 1.00 65.42 C
ATOM 22 N3 A B 552 -83.558 -92.630 6.133 1.00 68.61 N
ATOM 23 C4 A B 552 -83.396 -93.251 4.950 1.00 58.85 C
ATOM 24 P G B 553 -82.741 -98.864 8.128 1.00 39.01 P
ATOM 25 OP1 G B 553 -81.709 -97.959 8.700 1.00 42.37 O
ATOM 26 OP2 G B 553 -82.341 -99.982 7.232 1.00 35.30 O
ATOM 27 O5' G B 553 -83.658 -99.407 9.330 1.00 42.40 O
TER
ATOM 2 P G A 579 -99.386 -95.524 3.823 1.00 57.78 P
ATOM 3 OP1 G A 579 -100.644 -94.782 4.088 1.00 47.10 O
ATOM 4 OP2 G A 579 -98.854 -95.595 2.439 1.00 46.37 O
ATOM 5 O5' G A 579 -98.204 -94.985 4.766 1.00 66.47 O
ATOM 6 C5' G A 579 -98.350 -95.036 6.182 1.00 68.50 C
ATOM 7 C4' G A 579 -97.041 -94.741 6.898 1.00 57.38 C
ATOM 8 O4' G A 579 -96.123 -95.856 6.781 1.00 55.35 O
ATOM 9 C3' G A 579 -96.263 -93.551 6.354 1.00 63.06 C
ATOM 10 O3' G A 579 -96.745 -92.342 6.927 1.00 62.15 O
ATOM 11 C2' G A 579 -94.860 -93.865 6.852 1.00 58.10 C
ATOM 12 O2' G A 579 -94.706 -93.530 8.213 1.00 67.28 O
ATOM 13 C1' G A 579 -94.803 -95.369 6.648 1.00 49.35 C
ATOM 14 N9 G A 579 -94.374 -95.644 5.295 1.00 49.88 N
ATOM 15 C8 G A 579 -95.178 -95.772 4.191 1.00 54.60 C
ATOM 16 N7 G A 579 -94.502 -96.007 3.103 1.00 59.64 N
ATOM 17 C5 G A 579 -93.172 -96.026 3.516 1.00 52.61 C
ATOM 18 C6 G A 579 -91.981 -96.235 2.780 1.00 50.95 C
ATOM 19 O6 G A 579 -91.844 -96.454 1.572 1.00 76.70 O
ATOM 20 N1 G A 579 -90.854 -96.178 3.581 1.00 47.16 N
ATOM 21 C2 G A 579 -90.865 -95.941 4.931 1.00 61.43 C
ATOM 22 N2 G A 579 -89.663 -95.912 5.534 1.00 58.57 N
ATOM 23 N3 G A 579 -91.974 -95.742 5.636 1.00 63.36 N
ATOM 24 C4 G A 579 -93.082 -95.800 4.865 1.00 55.12 C
ATOM 25 P U A 580 -96.669 -90.999 6.061 1.00 39.80 P
ATOM 26 OP1 U A 580 -98.014 -90.375 6.074 1.00 67.09 O
ATOM 27 OP2 U A 580 -96.021 -91.311 4.763 1.00 41.28 O
ATOM 28 O5' U A 580 -95.690 -90.102 6.935 1.00 51.27 O
TER
ATOM 1 O3' C B 551 -87.584 -93.049 8.403 1.00 54.27 O
ATOM 2 P A B 552 -88.331 -94.368 8.889 1.00 46.31 P
ATOM 3 OP1 A B 552 -89.703 -94.307 8.321 1.00 50.33 O
ATOM 4 OP2 A B 552 -88.093 -94.545 10.340 1.00 50.37 O
ATOM 5 O5' A B 552 -87.487 -95.516 8.159 1.00 41.15 O
ATOM 6 C5' A B 552 -86.112 -95.682 8.492 1.00 42.26 C
ATOM 7 C4' A B 552 -85.331 -96.225 7.308 1.00 39.48 C
ATOM 8 O4' A B 552 -85.221 -95.269 6.220 1.00 49.30 O
ATOM 9 C3' A B 552 -83.903 -96.630 7.628 1.00 45.96 C
ATOM 10 O3' A B 552 -83.811 -97.988 7.344 1.00 47.80 O
ATOM 11 C2' A B 552 -83.045 -95.852 6.643 1.00 48.82 C
ATOM 12 O2' A B 552 -81.989 -96.621 6.117 1.00 57.02 O
ATOM 13 C1' A B 552 -84.049 -95.632 5.537 1.00 49.04 C
ATOM 14 N9 A B 552 -83.614 -94.577 4.647 1.00 54.31 N
ATOM 15 C8 A B 552 -83.302 -94.726 3.327 1.00 63.25 C
ATOM 16 N7 A B 552 -82.918 -93.617 2.742 1.00 57.33 N
ATOM 17 C5 A B 552 -82.973 -92.681 3.762 1.00 55.68 C
ATOM 18 C6 A B 552 -82.679 -91.314 3.783 1.00 52.70 C
ATOM 19 N6 A B 552 -82.263 -90.665 2.695 1.00 53.35 N
ATOM 20 N1 A B 552 -82.832 -90.664 4.955 1.00 65.49 N
ATOM 21 C2 A B 552 -83.253 -91.338 6.033 1.00 65.42 C
ATOM 22 N3 A B 552 -83.558 -92.630 6.133 1.00 68.61 N
ATOM 23 C4 A B 552 -83.396 -93.251 4.950 1.00 58.85 C
ATOM 24 P G B 553 -82.741 -98.864 8.128 1.00 39.01 P
ATOM 25 OP1 G B 553 -81.709 -97.959 8.700 1.00 42.37 O
ATOM 26 OP2 G B 553 -82.341 -99.982 7.232 1.00 35.30 O
ATOM 27 O5' G B 553 -83.658 -99.407 9.330 1.00 42.40 O
TER
Atoms:
OP1: (-100.644,-94.782,4.088)
OP2: (-98.854,-95.595,2.439)
C3': (-96.263,-93.551,6.354)
C1': (-94.803,-95.369,6.648)
C5': (-98.350,-95.036,6.182)
O6: (-91.844,-96.454,1.572)
O4': (-96.123,-95.856,6.781)
C8: (-95.178,-95.772,4.191)
C2: (-90.865,-95.941,4.931)
C6: (-91.981,-96.235,2.780)
C5: (-93.172,-96.026,3.516)
C4: (-93.082,-95.800,4.865)
P: (-99.386,-95.524,3.823)
C4': (-97.041,-94.741,6.898)
C2': (-94.860,-93.865,6.852)
O2': (-94.706,-93.530,8.213)
N1: (-90.854,-96.178,3.581)
N2: (-89.663,-95.912,5.534)
N3: (-91.974,-95.742,5.636)
N7: (-94.502,-96.007,3.103)
N9: (-94.374,-95.644,5.295)
O5': (-98.204,-94.985,4.766)
O3': (-96.745,-92.342,6.927)
OP2: (-98.854,-95.595,2.439)
C3': (-96.263,-93.551,6.354)
C1': (-94.803,-95.369,6.648)
C5': (-98.350,-95.036,6.182)
O6: (-91.844,-96.454,1.572)
O4': (-96.123,-95.856,6.781)
C8: (-95.178,-95.772,4.191)
C2: (-90.865,-95.941,4.931)
C6: (-91.981,-96.235,2.780)
C5: (-93.172,-96.026,3.516)
C4: (-93.082,-95.800,4.865)
P: (-99.386,-95.524,3.823)
C4': (-97.041,-94.741,6.898)
C2': (-94.860,-93.865,6.852)
O2': (-94.706,-93.530,8.213)
N1: (-90.854,-96.178,3.581)
N2: (-89.663,-95.912,5.534)
N3: (-91.974,-95.742,5.636)
N7: (-94.502,-96.007,3.103)
N9: (-94.374,-95.644,5.295)
O5': (-98.204,-94.985,4.766)
O3': (-96.745,-92.342,6.927)
OP1: (-89.703,-94.307,8.321)
OP2: (-88.093,-94.545,10.340)
C3': (-83.903,-96.630,7.628)
C1': (-84.049,-95.632,5.537)
C5': (-86.112,-95.682,8.492)
O4': (-85.221,-95.269,6.220)
C8: (-83.302,-94.726,3.327)
O2': (-81.989,-96.621,6.117)
C6: (-82.679,-91.314,3.783)
C5: (-82.973,-92.681,3.762)
C4: (-83.396,-93.251,4.950)
P: (-88.331,-94.368,8.889)
C4': (-85.331,-96.225,7.308)
C2': (-83.045,-95.852,6.643)
C2: (-83.253,-91.338,6.033)
N1: (-82.832,-90.664,4.955)
N3: (-83.558,-92.630,6.133)
N6: (-82.263,-90.665,2.695)
N7: (-82.918,-93.617,2.742)
N9: (-83.614,-94.577,4.647)
O5': (-87.487,-95.516,8.159)
O3': (-83.811,-97.988,7.344)
OP2: (-88.093,-94.545,10.340)
C3': (-83.903,-96.630,7.628)
C1': (-84.049,-95.632,5.537)
C5': (-86.112,-95.682,8.492)
O4': (-85.221,-95.269,6.220)
C8: (-83.302,-94.726,3.327)
O2': (-81.989,-96.621,6.117)
C6: (-82.679,-91.314,3.783)
C5: (-82.973,-92.681,3.762)
C4: (-83.396,-93.251,4.950)
P: (-88.331,-94.368,8.889)
C4': (-85.331,-96.225,7.308)
C2': (-83.045,-95.852,6.643)
C2: (-83.253,-91.338,6.033)
N1: (-82.832,-90.664,4.955)
N3: (-83.558,-92.630,6.133)
N6: (-82.263,-90.665,2.695)
N7: (-82.918,-93.617,2.742)
N9: (-83.614,-94.577,4.647)
O5': (-87.487,-95.516,8.159)
O3': (-83.811,-97.988,7.344)
Image (generated by PyMOL):