Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02479:01927
Extra
PDB:
ATOM 1 O3' A A2478 85.463 111.737 104.133 1.00 87.82 O
ATOM 2 P G A2479 86.951 112.211 104.504 1.00 84.08 P
ATOM 3 OP1 G A2479 87.909 111.356 103.734 1.00 82.51 O
ATOM 4 OP2 G A2479 87.036 112.258 105.989 1.00 83.50 O
ATOM 5 O5' G A2479 87.028 113.715 103.964 1.00 77.60 O
ATOM 6 C5' G A2479 87.941 114.074 102.908 1.00 66.54 C
ATOM 7 C4' G A2479 89.253 114.560 103.487 1.00 59.20 C
ATOM 8 O4' G A2479 90.332 114.151 102.610 1.00 57.42 O
ATOM 9 C3' G A2479 89.437 116.064 103.645 1.00 54.90 C
ATOM 10 O3' G A2479 88.875 116.591 104.840 1.00 51.84 O
ATOM 11 C2' G A2479 90.948 116.191 103.643 1.00 53.39 C
ATOM 12 O2' G A2479 91.497 115.815 104.885 1.00 52.41 O
ATOM 13 C1' G A2479 91.328 115.157 102.581 1.00 54.65 C
ATOM 14 N9 G A2479 91.346 115.738 101.242 1.00 53.40 N
ATOM 15 C8 G A2479 90.389 115.605 100.264 1.00 53.17 C
ATOM 16 N7 G A2479 90.647 116.309 99.198 1.00 52.85 N
ATOM 17 C5 G A2479 91.853 116.932 99.484 1.00 51.92 C
ATOM 18 C6 G A2479 92.617 117.837 98.721 1.00 51.06 C
ATOM 19 O6 G A2479 92.364 118.314 97.610 1.00 51.97 O
ATOM 20 N1 G A2479 93.781 118.200 99.379 1.00 50.66 N
ATOM 21 C2 G A2479 94.155 117.761 100.616 1.00 51.18 C
ATOM 22 N2 G A2479 95.319 118.214 101.077 1.00 52.54 N
ATOM 23 N3 G A2479 93.443 116.936 101.349 1.00 52.30 N
ATOM 24 C4 G A2479 92.310 116.565 100.727 1.00 52.27 C
ATOM 25 P G A2480 88.390 118.127 104.883 1.00 49.79 P
ATOM 26 OP1 G A2480 87.820 118.383 106.228 1.00 49.63 O
ATOM 27 OP2 G A2480 87.564 118.400 103.676 1.00 51.55 O
ATOM 28 O5' G A2480 89.736 118.965 104.740 1.00 47.57 O
TER
ATOM 1 O3' U B1926 98.439 117.437 103.492 1.00 55.79 O
ATOM 2 P A B1927 97.219 116.640 104.172 1.00 56.43 P
ATOM 3 OP1 A B1927 97.426 115.201 103.859 1.00 56.47 O
ATOM 4 OP2 A B1927 95.937 117.294 103.811 1.00 56.00 O
ATOM 5 O5' A B1927 97.445 116.832 105.730 1.00 55.91 O
ATOM 6 C5' A B1927 98.570 116.242 106.375 1.00 57.69 C
ATOM 7 C4' A B1927 98.153 115.635 107.685 1.00 58.72 C
ATOM 8 O4' A B1927 99.337 115.100 108.331 1.00 60.12 O
ATOM 9 C3' A B1927 97.536 116.615 108.677 1.00 58.89 C
ATOM 10 O3' A B1927 96.647 115.907 109.527 1.00 58.27 O
ATOM 11 C2' A B1927 98.745 117.061 109.483 1.00 59.64 C
ATOM 12 O2' A B1927 98.390 117.517 110.770 1.00 60.92 O
ATOM 13 C1' A B1927 99.550 115.763 109.558 1.00 60.75 C
ATOM 14 N9 A B1927 100.987 115.979 109.711 1.00 62.60 N
ATOM 15 C8 A B1927 101.843 116.606 108.840 1.00 63.04 C
ATOM 16 N7 A B1927 103.075 116.689 109.277 1.00 64.09 N
ATOM 17 C5 A B1927 103.033 116.064 110.513 1.00 64.79 C
ATOM 18 C6 A B1927 104.017 115.835 111.488 1.00 65.05 C
ATOM 19 N6 A B1927 105.279 116.245 111.373 1.00 64.97 N
ATOM 20 N1 A B1927 103.652 115.170 112.604 1.00 66.44 N
ATOM 21 C2 A B1927 102.374 114.779 112.731 1.00 66.97 C
ATOM 22 N3 A B1927 101.353 114.950 111.891 1.00 66.31 N
ATOM 23 C4 A B1927 101.755 115.606 110.787 1.00 64.98 C
ATOM 24 P C B1928 95.073 116.226 109.504 1.00 58.01 P
ATOM 25 OP1 C B1928 94.696 116.744 108.166 1.00 58.05 O
ATOM 26 OP2 C B1928 94.761 117.026 110.715 1.00 57.46 O
ATOM 27 O5' C B1928 94.448 114.776 109.709 1.00 58.62 O
TER
ATOM 2 P G A2479 86.951 112.211 104.504 1.00 84.08 P
ATOM 3 OP1 G A2479 87.909 111.356 103.734 1.00 82.51 O
ATOM 4 OP2 G A2479 87.036 112.258 105.989 1.00 83.50 O
ATOM 5 O5' G A2479 87.028 113.715 103.964 1.00 77.60 O
ATOM 6 C5' G A2479 87.941 114.074 102.908 1.00 66.54 C
ATOM 7 C4' G A2479 89.253 114.560 103.487 1.00 59.20 C
ATOM 8 O4' G A2479 90.332 114.151 102.610 1.00 57.42 O
ATOM 9 C3' G A2479 89.437 116.064 103.645 1.00 54.90 C
ATOM 10 O3' G A2479 88.875 116.591 104.840 1.00 51.84 O
ATOM 11 C2' G A2479 90.948 116.191 103.643 1.00 53.39 C
ATOM 12 O2' G A2479 91.497 115.815 104.885 1.00 52.41 O
ATOM 13 C1' G A2479 91.328 115.157 102.581 1.00 54.65 C
ATOM 14 N9 G A2479 91.346 115.738 101.242 1.00 53.40 N
ATOM 15 C8 G A2479 90.389 115.605 100.264 1.00 53.17 C
ATOM 16 N7 G A2479 90.647 116.309 99.198 1.00 52.85 N
ATOM 17 C5 G A2479 91.853 116.932 99.484 1.00 51.92 C
ATOM 18 C6 G A2479 92.617 117.837 98.721 1.00 51.06 C
ATOM 19 O6 G A2479 92.364 118.314 97.610 1.00 51.97 O
ATOM 20 N1 G A2479 93.781 118.200 99.379 1.00 50.66 N
ATOM 21 C2 G A2479 94.155 117.761 100.616 1.00 51.18 C
ATOM 22 N2 G A2479 95.319 118.214 101.077 1.00 52.54 N
ATOM 23 N3 G A2479 93.443 116.936 101.349 1.00 52.30 N
ATOM 24 C4 G A2479 92.310 116.565 100.727 1.00 52.27 C
ATOM 25 P G A2480 88.390 118.127 104.883 1.00 49.79 P
ATOM 26 OP1 G A2480 87.820 118.383 106.228 1.00 49.63 O
ATOM 27 OP2 G A2480 87.564 118.400 103.676 1.00 51.55 O
ATOM 28 O5' G A2480 89.736 118.965 104.740 1.00 47.57 O
TER
ATOM 1 O3' U B1926 98.439 117.437 103.492 1.00 55.79 O
ATOM 2 P A B1927 97.219 116.640 104.172 1.00 56.43 P
ATOM 3 OP1 A B1927 97.426 115.201 103.859 1.00 56.47 O
ATOM 4 OP2 A B1927 95.937 117.294 103.811 1.00 56.00 O
ATOM 5 O5' A B1927 97.445 116.832 105.730 1.00 55.91 O
ATOM 6 C5' A B1927 98.570 116.242 106.375 1.00 57.69 C
ATOM 7 C4' A B1927 98.153 115.635 107.685 1.00 58.72 C
ATOM 8 O4' A B1927 99.337 115.100 108.331 1.00 60.12 O
ATOM 9 C3' A B1927 97.536 116.615 108.677 1.00 58.89 C
ATOM 10 O3' A B1927 96.647 115.907 109.527 1.00 58.27 O
ATOM 11 C2' A B1927 98.745 117.061 109.483 1.00 59.64 C
ATOM 12 O2' A B1927 98.390 117.517 110.770 1.00 60.92 O
ATOM 13 C1' A B1927 99.550 115.763 109.558 1.00 60.75 C
ATOM 14 N9 A B1927 100.987 115.979 109.711 1.00 62.60 N
ATOM 15 C8 A B1927 101.843 116.606 108.840 1.00 63.04 C
ATOM 16 N7 A B1927 103.075 116.689 109.277 1.00 64.09 N
ATOM 17 C5 A B1927 103.033 116.064 110.513 1.00 64.79 C
ATOM 18 C6 A B1927 104.017 115.835 111.488 1.00 65.05 C
ATOM 19 N6 A B1927 105.279 116.245 111.373 1.00 64.97 N
ATOM 20 N1 A B1927 103.652 115.170 112.604 1.00 66.44 N
ATOM 21 C2 A B1927 102.374 114.779 112.731 1.00 66.97 C
ATOM 22 N3 A B1927 101.353 114.950 111.891 1.00 66.31 N
ATOM 23 C4 A B1927 101.755 115.606 110.787 1.00 64.98 C
ATOM 24 P C B1928 95.073 116.226 109.504 1.00 58.01 P
ATOM 25 OP1 C B1928 94.696 116.744 108.166 1.00 58.05 O
ATOM 26 OP2 C B1928 94.761 117.026 110.715 1.00 57.46 O
ATOM 27 O5' C B1928 94.448 114.776 109.709 1.00 58.62 O
TER
Atoms:
OP1: (87.909,111.356,103.734)
OP2: (87.036,112.258,105.989)
C3': (89.437,116.064,103.645)
C1': (91.328,115.157,102.581)
C5': (87.941,114.074,102.908)
O6: (92.364,118.314,97.610)
O4': (90.332,114.151,102.610)
C8: (90.389,115.605,100.264)
C2: (94.155,117.761,100.616)
C6: (92.617,117.837,98.721)
C5: (91.853,116.932,99.484)
C4: (92.310,116.565,100.727)
P: (86.951,112.211,104.504)
C4': (89.253,114.560,103.487)
C2': (90.948,116.191,103.643)
O2': (91.497,115.815,104.885)
N1: (93.781,118.200,99.379)
N2: (95.319,118.214,101.077)
N3: (93.443,116.936,101.349)
N7: (90.647,116.309,99.198)
N9: (91.346,115.738,101.242)
O5': (87.028,113.715,103.964)
O3': (88.875,116.591,104.840)
OP2: (87.036,112.258,105.989)
C3': (89.437,116.064,103.645)
C1': (91.328,115.157,102.581)
C5': (87.941,114.074,102.908)
O6: (92.364,118.314,97.610)
O4': (90.332,114.151,102.610)
C8: (90.389,115.605,100.264)
C2: (94.155,117.761,100.616)
C6: (92.617,117.837,98.721)
C5: (91.853,116.932,99.484)
C4: (92.310,116.565,100.727)
P: (86.951,112.211,104.504)
C4': (89.253,114.560,103.487)
C2': (90.948,116.191,103.643)
O2': (91.497,115.815,104.885)
N1: (93.781,118.200,99.379)
N2: (95.319,118.214,101.077)
N3: (93.443,116.936,101.349)
N7: (90.647,116.309,99.198)
N9: (91.346,115.738,101.242)
O5': (87.028,113.715,103.964)
O3': (88.875,116.591,104.840)
OP1: (97.426,115.201,103.859)
OP2: (95.937,117.294,103.811)
C3': (97.536,116.615,108.677)
C1': (99.550,115.763,109.558)
C5': (98.570,116.242,106.375)
O4': (99.337,115.100,108.331)
C8: (101.843,116.606,108.840)
O2': (98.390,117.517,110.770)
C6: (104.017,115.835,111.488)
C5: (103.033,116.064,110.513)
C4: (101.755,115.606,110.787)
P: (97.219,116.640,104.172)
C4': (98.153,115.635,107.685)
C2': (98.745,117.061,109.483)
C2: (102.374,114.779,112.731)
N1: (103.652,115.170,112.604)
N3: (101.353,114.950,111.891)
N6: (105.279,116.245,111.373)
N7: (103.075,116.689,109.277)
N9: (100.987,115.979,109.711)
O5': (97.445,116.832,105.730)
O3': (96.647,115.907,109.527)
OP2: (95.937,117.294,103.811)
C3': (97.536,116.615,108.677)
C1': (99.550,115.763,109.558)
C5': (98.570,116.242,106.375)
O4': (99.337,115.100,108.331)
C8: (101.843,116.606,108.840)
O2': (98.390,117.517,110.770)
C6: (104.017,115.835,111.488)
C5: (103.033,116.064,110.513)
C4: (101.755,115.606,110.787)
P: (97.219,116.640,104.172)
C4': (98.153,115.635,107.685)
C2': (98.745,117.061,109.483)
C2: (102.374,114.779,112.731)
N1: (103.652,115.170,112.604)
N3: (101.353,114.950,111.891)
N6: (105.279,116.245,111.373)
N7: (103.075,116.689,109.277)
N9: (100.987,115.979,109.711)
O5': (97.445,116.832,105.730)
O3': (96.647,115.907,109.527)
Image (generated by PyMOL):