Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GX5:A55:A89
Extra
PDB:
ATOM 1 O3' G A 54 10.847 10.383 3.489 1.00 62.28 O
ATOM 2 P G A 55 10.168 9.603 4.705 1.00 85.55 P
ATOM 3 OP1 G A 55 8.889 10.259 5.064 1.00 85.61 O
ATOM 4 OP2 G A 55 11.217 9.425 5.732 1.00 86.71 O
ATOM 5 O5' G A 55 9.806 8.191 4.041 1.00 73.54 O
ATOM 6 C5' G A 55 9.046 8.148 2.833 1.00 70.14 C
ATOM 7 C4' G A 55 8.636 6.730 2.484 1.00 66.53 C
ATOM 8 O4' G A 55 9.721 6.025 1.826 1.00 65.11 O
ATOM 9 C3' G A 55 8.306 5.853 3.679 1.00 65.49 C
ATOM 10 O3' G A 55 6.984 6.099 4.117 1.00 67.87 O
ATOM 11 C2' G A 55 8.422 4.479 3.041 1.00 64.30 C
ATOM 12 O2' G A 55 7.272 4.176 2.279 1.00 65.03 O
ATOM 13 C1' G A 55 9.653 4.650 2.149 1.00 60.98 C
ATOM 14 N9 G A 55 10.887 4.314 2.840 1.00 58.75 N
ATOM 15 C8 G A 55 11.696 5.200 3.507 1.00 59.78 C
ATOM 16 N7 G A 55 12.741 4.640 4.046 1.00 59.43 N
ATOM 17 C5 G A 55 12.617 3.300 3.719 1.00 57.24 C
ATOM 18 C6 G A 55 13.458 2.214 4.044 1.00 58.14 C
ATOM 19 O6 G A 55 14.503 2.239 4.697 1.00 59.33 O
ATOM 20 N1 G A 55 12.990 1.008 3.532 1.00 57.26 N
ATOM 21 C2 G A 55 11.835 0.882 2.796 1.00 58.77 C
ATOM 22 N2 G A 55 11.542 -0.362 2.386 1.00 57.22 N
ATOM 23 N3 G A 55 11.029 1.899 2.484 1.00 58.98 N
ATOM 24 C4 G A 55 11.481 3.077 2.978 1.00 57.37 C
ATOM 25 P U A 56 6.625 5.795 5.641 1.00 71.67 P
ATOM 26 OP1 U A 56 5.171 5.540 5.783 1.00 71.27 O
ATOM 27 OP2 U A 56 7.302 6.796 6.503 1.00 69.37 O
ATOM 28 O5' U A 56 7.383 4.402 5.754 1.00 53.53 O
TER
ATOM 1 O3' G B 88 9.501 -2.747 2.151 1.00 49.81 O
ATOM 2 P A B 89 8.312 -2.286 1.191 1.00 45.15 P
ATOM 3 OP1 A B 89 8.577 -0.865 0.893 1.00 44.28 O
ATOM 4 OP2 A B 89 7.010 -2.697 1.764 1.00 46.66 O
ATOM 5 O5' A B 89 8.613 -3.144 -0.123 1.00 47.85 O
ATOM 6 C5' A B 89 9.879 -3.017 -0.745 1.00 45.08 C
ATOM 7 C4' A B 89 10.063 -4.133 -1.751 1.00 45.99 C
ATOM 8 O4' A B 89 10.273 -5.395 -1.051 1.00 43.98 O
ATOM 9 C3' A B 89 8.857 -4.398 -2.644 1.00 47.11 C
ATOM 10 O3' A B 89 8.776 -3.467 -3.733 1.00 48.72 O
ATOM 11 C2' A B 89 9.252 -5.792 -3.115 1.00 49.46 C
ATOM 12 O2' A B 89 10.365 -5.756 -3.983 1.00 53.55 O
ATOM 13 C1' A B 89 9.685 -6.440 -1.803 1.00 43.99 C
ATOM 14 N9 A B 89 8.586 -7.054 -1.050 1.00 44.04 N
ATOM 15 C8 A B 89 7.773 -6.466 -0.121 1.00 41.10 C
ATOM 16 N7 A B 89 6.874 -7.278 0.386 1.00 40.08 N
ATOM 17 C5 A B 89 7.099 -8.479 -0.253 1.00 43.66 C
ATOM 18 C6 A B 89 6.486 -9.749 -0.164 1.00 47.20 C
ATOM 19 N6 A B 89 5.466 -10.036 0.645 1.00 46.35 N
ATOM 20 N1 A B 89 6.958 -10.737 -0.947 1.00 49.65 N
ATOM 21 C2 A B 89 7.981 -10.467 -1.758 1.00 49.70 C
ATOM 22 N3 A B 89 8.639 -9.322 -1.925 1.00 51.90 N
ATOM 23 C4 A B 89 8.145 -8.355 -1.142 1.00 46.97 C
ATOM 24 P G B 90 7.375 -3.018 -4.402 1.00 53.81 P
ATOM 25 OP1 G B 90 7.672 -1.916 -5.343 1.00 55.96 O
ATOM 26 OP2 G B 90 6.323 -2.786 -3.383 1.00 48.30 O
ATOM 27 O5' G B 90 7.024 -4.328 -5.248 1.00 62.28 O
TER
ATOM 2 P G A 55 10.168 9.603 4.705 1.00 85.55 P
ATOM 3 OP1 G A 55 8.889 10.259 5.064 1.00 85.61 O
ATOM 4 OP2 G A 55 11.217 9.425 5.732 1.00 86.71 O
ATOM 5 O5' G A 55 9.806 8.191 4.041 1.00 73.54 O
ATOM 6 C5' G A 55 9.046 8.148 2.833 1.00 70.14 C
ATOM 7 C4' G A 55 8.636 6.730 2.484 1.00 66.53 C
ATOM 8 O4' G A 55 9.721 6.025 1.826 1.00 65.11 O
ATOM 9 C3' G A 55 8.306 5.853 3.679 1.00 65.49 C
ATOM 10 O3' G A 55 6.984 6.099 4.117 1.00 67.87 O
ATOM 11 C2' G A 55 8.422 4.479 3.041 1.00 64.30 C
ATOM 12 O2' G A 55 7.272 4.176 2.279 1.00 65.03 O
ATOM 13 C1' G A 55 9.653 4.650 2.149 1.00 60.98 C
ATOM 14 N9 G A 55 10.887 4.314 2.840 1.00 58.75 N
ATOM 15 C8 G A 55 11.696 5.200 3.507 1.00 59.78 C
ATOM 16 N7 G A 55 12.741 4.640 4.046 1.00 59.43 N
ATOM 17 C5 G A 55 12.617 3.300 3.719 1.00 57.24 C
ATOM 18 C6 G A 55 13.458 2.214 4.044 1.00 58.14 C
ATOM 19 O6 G A 55 14.503 2.239 4.697 1.00 59.33 O
ATOM 20 N1 G A 55 12.990 1.008 3.532 1.00 57.26 N
ATOM 21 C2 G A 55 11.835 0.882 2.796 1.00 58.77 C
ATOM 22 N2 G A 55 11.542 -0.362 2.386 1.00 57.22 N
ATOM 23 N3 G A 55 11.029 1.899 2.484 1.00 58.98 N
ATOM 24 C4 G A 55 11.481 3.077 2.978 1.00 57.37 C
ATOM 25 P U A 56 6.625 5.795 5.641 1.00 71.67 P
ATOM 26 OP1 U A 56 5.171 5.540 5.783 1.00 71.27 O
ATOM 27 OP2 U A 56 7.302 6.796 6.503 1.00 69.37 O
ATOM 28 O5' U A 56 7.383 4.402 5.754 1.00 53.53 O
TER
ATOM 1 O3' G B 88 9.501 -2.747 2.151 1.00 49.81 O
ATOM 2 P A B 89 8.312 -2.286 1.191 1.00 45.15 P
ATOM 3 OP1 A B 89 8.577 -0.865 0.893 1.00 44.28 O
ATOM 4 OP2 A B 89 7.010 -2.697 1.764 1.00 46.66 O
ATOM 5 O5' A B 89 8.613 -3.144 -0.123 1.00 47.85 O
ATOM 6 C5' A B 89 9.879 -3.017 -0.745 1.00 45.08 C
ATOM 7 C4' A B 89 10.063 -4.133 -1.751 1.00 45.99 C
ATOM 8 O4' A B 89 10.273 -5.395 -1.051 1.00 43.98 O
ATOM 9 C3' A B 89 8.857 -4.398 -2.644 1.00 47.11 C
ATOM 10 O3' A B 89 8.776 -3.467 -3.733 1.00 48.72 O
ATOM 11 C2' A B 89 9.252 -5.792 -3.115 1.00 49.46 C
ATOM 12 O2' A B 89 10.365 -5.756 -3.983 1.00 53.55 O
ATOM 13 C1' A B 89 9.685 -6.440 -1.803 1.00 43.99 C
ATOM 14 N9 A B 89 8.586 -7.054 -1.050 1.00 44.04 N
ATOM 15 C8 A B 89 7.773 -6.466 -0.121 1.00 41.10 C
ATOM 16 N7 A B 89 6.874 -7.278 0.386 1.00 40.08 N
ATOM 17 C5 A B 89 7.099 -8.479 -0.253 1.00 43.66 C
ATOM 18 C6 A B 89 6.486 -9.749 -0.164 1.00 47.20 C
ATOM 19 N6 A B 89 5.466 -10.036 0.645 1.00 46.35 N
ATOM 20 N1 A B 89 6.958 -10.737 -0.947 1.00 49.65 N
ATOM 21 C2 A B 89 7.981 -10.467 -1.758 1.00 49.70 C
ATOM 22 N3 A B 89 8.639 -9.322 -1.925 1.00 51.90 N
ATOM 23 C4 A B 89 8.145 -8.355 -1.142 1.00 46.97 C
ATOM 24 P G B 90 7.375 -3.018 -4.402 1.00 53.81 P
ATOM 25 OP1 G B 90 7.672 -1.916 -5.343 1.00 55.96 O
ATOM 26 OP2 G B 90 6.323 -2.786 -3.383 1.00 48.30 O
ATOM 27 O5' G B 90 7.024 -4.328 -5.248 1.00 62.28 O
TER
Atoms:
OP1: (8.889,10.259,5.064)
OP2: (11.217,9.425,5.732)
C3': (8.306,5.853,3.679)
C1': (9.653,4.650,2.149)
C5': (9.046,8.148,2.833)
O6: (14.503,2.239,4.697)
O4': (9.721,6.025,1.826)
C8: (11.696,5.200,3.507)
C2: (11.835,0.882,2.796)
C6: (13.458,2.214,4.044)
C5: (12.617,3.300,3.719)
C4: (11.481,3.077,2.978)
P: (10.168,9.603,4.705)
C4': (8.636,6.730,2.484)
C2': (8.422,4.479,3.041)
O2': (7.272,4.176,2.279)
N1: (12.990,1.008,3.532)
N2: (11.542,-0.362,2.386)
N3: (11.029,1.899,2.484)
N7: (12.741,4.640,4.046)
N9: (10.887,4.314,2.840)
O5': (9.806,8.191,4.041)
O3': (6.984,6.099,4.117)
OP2: (11.217,9.425,5.732)
C3': (8.306,5.853,3.679)
C1': (9.653,4.650,2.149)
C5': (9.046,8.148,2.833)
O6: (14.503,2.239,4.697)
O4': (9.721,6.025,1.826)
C8: (11.696,5.200,3.507)
C2: (11.835,0.882,2.796)
C6: (13.458,2.214,4.044)
C5: (12.617,3.300,3.719)
C4: (11.481,3.077,2.978)
P: (10.168,9.603,4.705)
C4': (8.636,6.730,2.484)
C2': (8.422,4.479,3.041)
O2': (7.272,4.176,2.279)
N1: (12.990,1.008,3.532)
N2: (11.542,-0.362,2.386)
N3: (11.029,1.899,2.484)
N7: (12.741,4.640,4.046)
N9: (10.887,4.314,2.840)
O5': (9.806,8.191,4.041)
O3': (6.984,6.099,4.117)
OP1: (8.577,-0.865,0.893)
OP2: (7.010,-2.697,1.764)
C3': (8.857,-4.398,-2.644)
C1': (9.685,-6.440,-1.803)
C5': (9.879,-3.017,-0.745)
O4': (10.273,-5.395,-1.051)
C8: (7.773,-6.466,-0.121)
O2': (10.365,-5.756,-3.983)
C6: (6.486,-9.749,-0.164)
C5: (7.099,-8.479,-0.253)
C4: (8.145,-8.355,-1.142)
P: (8.312,-2.286,1.191)
C4': (10.063,-4.133,-1.751)
C2': (9.252,-5.792,-3.115)
C2: (7.981,-10.467,-1.758)
N1: (6.958,-10.737,-0.947)
N3: (8.639,-9.322,-1.925)
N6: (5.466,-10.036,0.645)
N7: (6.874,-7.278,0.386)
N9: (8.586,-7.054,-1.050)
O5': (8.613,-3.144,-0.123)
O3': (8.776,-3.467,-3.733)
OP2: (7.010,-2.697,1.764)
C3': (8.857,-4.398,-2.644)
C1': (9.685,-6.440,-1.803)
C5': (9.879,-3.017,-0.745)
O4': (10.273,-5.395,-1.051)
C8: (7.773,-6.466,-0.121)
O2': (10.365,-5.756,-3.983)
C6: (6.486,-9.749,-0.164)
C5: (7.099,-8.479,-0.253)
C4: (8.145,-8.355,-1.142)
P: (8.312,-2.286,1.191)
C4': (10.063,-4.133,-1.751)
C2': (9.252,-5.792,-3.115)
C2: (7.981,-10.467,-1.758)
N1: (6.958,-10.737,-0.947)
N3: (8.639,-9.322,-1.925)
N6: (5.466,-10.036,0.645)
N7: (6.874,-7.278,0.386)
N9: (8.586,-7.054,-1.050)
O5': (8.613,-3.144,-0.123)
O3': (8.776,-3.467,-3.733)
Image (generated by PyMOL):