ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1896:A1711

Extra

PDB:
ATOM 1 O3' C A1895 -53.789 -22.943 -2.790 1.00 10.07 O
ATOM 2 P G A1896 -54.407 -24.190 -3.604 1.00 3.53 P
ATOM 3 OP1 G A1896 -53.294 -25.166 -3.720 1.00 15.73 O
ATOM 4 OP2 G A1896 -55.099 -23.706 -4.827 1.00 15.73 O
ATOM 5 O5' G A1896 -55.501 -24.787 -2.619 1.00 1.19 O
ATOM 6 C5' G A1896 -55.113 -25.226 -1.318 1.00 1.19 C
ATOM 7 C4' G A1896 -56.188 -26.084 -0.722 1.00 1.19 C
ATOM 8 O4' G A1896 -57.396 -25.297 -0.609 1.00 1.19 O
ATOM 9 C3' G A1896 -56.552 -27.339 -1.515 1.00 1.19 C
ATOM 10 O3' G A1896 -56.974 -28.357 -0.580 1.00 1.19 O
ATOM 11 C2' G A1896 -57.788 -26.888 -2.287 1.00 1.19 C
ATOM 12 O2' G A1896 -58.647 -27.969 -2.520 1.00 1.19 O
ATOM 13 C1' G A1896 -58.446 -25.944 -1.282 1.00 1.19 C
ATOM 14 N9 G A1896 -59.305 -24.906 -1.828 1.00 0.79 N
ATOM 15 C8 G A1896 -58.997 -23.996 -2.804 1.00 0.79 C
ATOM 16 N7 G A1896 -59.944 -23.121 -2.996 1.00 0.79 N
ATOM 17 C5 G A1896 -60.937 -23.495 -2.105 1.00 0.79 C
ATOM 18 C6 G A1896 -62.194 -22.915 -1.843 1.00 0.79 C
ATOM 19 O6 G A1896 -62.684 -21.922 -2.341 1.00 0.79 O
ATOM 20 N1 G A1896 -62.899 -23.617 -0.885 1.00 0.79 N
ATOM 21 C2 G A1896 -62.445 -24.730 -0.254 1.00 0.79 C
ATOM 22 N2 G A1896 -63.271 -25.268 0.635 1.00 0.79 N
ATOM 23 N3 G A1896 -61.265 -25.279 -0.475 1.00 0.79 N
ATOM 24 C4 G A1896 -60.570 -24.612 -1.407 1.00 0.79 C
ATOM 25 P A A1897 -55.925 -29.436 -0.004 1.00 0.79 P
ATOM 26 OP1 A A1897 -56.432 -29.828 1.342 1.00 0.79 O
ATOM 27 OP2 A A1897 -54.510 -28.994 -0.159 1.00 0.79 O
ATOM 28 O5' A A1897 -56.156 -30.685 -0.956 1.00 12.74 O
TER

ATOM 1 O3' A B1710 -63.320 -28.971 3.525 1.00 15.85 O
ATOM 2 P A B1711 -63.228 -27.448 4.035 1.00 7.55 P
ATOM 3 OP1 A B1711 -62.515 -26.627 3.019 1.00 7.55 O
ATOM 4 OP2 A B1711 -62.744 -27.435 5.436 1.00 7.55 O
ATOM 5 O5' A B1711 -64.743 -26.977 4.019 1.00 0.79 O
ATOM 6 C5' A B1711 -65.055 -25.665 4.431 1.00 0.79 C
ATOM 7 C4' A B1711 -66.490 -25.553 4.825 1.00 0.79 C
ATOM 8 O4' A B1711 -67.315 -25.629 3.647 1.00 0.79 O
ATOM 9 C3' A B1711 -67.050 -26.579 5.803 1.00 0.79 C
ATOM 10 O3' A B1711 -67.900 -25.832 6.675 1.00 0.79 O
ATOM 11 C2' A B1711 -67.926 -27.441 4.880 1.00 0.79 C
ATOM 12 O2' A B1711 -69.033 -28.081 5.468 1.00 0.79 O
ATOM 13 C1' A B1711 -68.456 -26.352 3.976 1.00 0.79 C
ATOM 14 N9 A B1711 -69.257 -26.623 2.789 1.00 23.13 N
ATOM 15 C8 A B1711 -69.757 -25.657 1.949 1.00 23.13 C
ATOM 16 N7 A B1711 -70.540 -26.116 1.011 1.00 23.13 N
ATOM 17 C5 A B1711 -70.541 -27.473 1.232 1.00 23.13 C
ATOM 18 C6 A B1711 -71.189 -28.483 0.593 1.00 23.13 C
ATOM 19 N6 A B1711 -71.998 -28.275 -0.441 1.00 23.13 N
ATOM 20 N1 A B1711 -70.991 -29.734 1.043 1.00 23.13 N
ATOM 21 C2 A B1711 -70.174 -29.919 2.098 1.00 23.13 C
ATOM 22 N3 A B1711 -69.501 -29.026 2.798 1.00 23.13 N
ATOM 23 C4 A B1711 -69.731 -27.806 2.308 1.00 23.13 C
ATOM 24 P A B1712 -67.278 -25.024 7.914 1.00 0.79 P
ATOM 25 OP1 A B1712 -68.282 -24.019 8.334 1.00 0.79 O
ATOM 26 OP2 A B1712 -65.897 -24.596 7.592 1.00 0.79 O
ATOM 27 O5' A B1712 -67.223 -26.103 9.081 1.00 1.99 O
TER

Atoms:
OP1: (-53.294,-25.166,-3.720)
OP2: (-55.099,-23.706,-4.827)
C3': (-56.552,-27.339,-1.515)
C1': (-58.446,-25.944,-1.282)
C5': (-55.113,-25.226,-1.318)
O6: (-62.684,-21.922,-2.341)
O4': (-57.396,-25.297,-0.609)
C8: (-58.997,-23.996,-2.804)
C2: (-62.445,-24.730,-0.254)
C6: (-62.194,-22.915,-1.843)
C5: (-60.937,-23.495,-2.105)
C4: (-60.570,-24.612,-1.407)
P: (-54.407,-24.190,-3.604)
C4': (-56.188,-26.084,-0.722)
C2': (-57.788,-26.888,-2.287)
O2': (-58.647,-27.969,-2.520)
N1: (-62.899,-23.617,-0.885)
N2: (-63.271,-25.268,0.635)
N3: (-61.265,-25.279,-0.475)
N7: (-59.944,-23.121,-2.996)
N9: (-59.305,-24.906,-1.828)
O5': (-55.501,-24.787,-2.619)
O3': (-56.974,-28.357,-0.580)
OP1: (-62.515,-26.627,3.019)
OP2: (-62.744,-27.435,5.436)
C3': (-67.050,-26.579,5.803)
C1': (-68.456,-26.352,3.976)
C5': (-65.055,-25.665,4.431)
O4': (-67.315,-25.629,3.647)
C8: (-69.757,-25.657,1.949)
O2': (-69.033,-28.081,5.468)
C6: (-71.189,-28.483,0.593)
C5: (-70.541,-27.473,1.232)
C4: (-69.731,-27.806,2.308)
P: (-63.228,-27.448,4.035)
C4': (-66.490,-25.553,4.825)
C2': (-67.926,-27.441,4.880)
C2: (-70.174,-29.919,2.098)
N1: (-70.991,-29.734,1.043)
N3: (-69.501,-29.026,2.798)
N6: (-71.998,-28.275,-0.441)
N7: (-70.540,-26.116,1.011)
N9: (-69.257,-26.623,2.789)
O5': (-64.743,-26.977,4.019)
O3': (-67.900,-25.832,6.675)
Image (generated by PyMOL):
PyMOL image
show in jmol