ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:02479:01927

Extra

PDB:
ATOM 1 O3' A A2478 85.450 111.559 104.385 1.00 88.10 O
ATOM 2 P G A2479 86.916 112.087 104.782 1.00 84.61 P
ATOM 3 OP1 G A2479 87.921 111.195 104.123 1.00 82.95 O
ATOM 4 OP2 G A2479 86.937 112.254 106.263 1.00 83.92 O
ATOM 5 O5' G A2479 86.996 113.542 104.124 1.00 78.40 O
ATOM 6 C5' G A2479 87.912 113.813 103.047 1.00 67.11 C
ATOM 7 C4' G A2479 89.208 114.365 103.591 1.00 59.57 C
ATOM 8 O4' G A2479 90.296 113.979 102.716 1.00 56.76 O
ATOM 9 C3' G A2479 89.330 115.878 103.712 1.00 56.02 C
ATOM 10 O3' G A2479 88.740 116.400 104.899 1.00 51.67 O
ATOM 11 C2' G A2479 90.839 116.058 103.710 1.00 55.21 C
ATOM 12 O2' G A2479 91.408 115.725 104.958 1.00 56.19 O
ATOM 13 C1' G A2479 91.261 115.014 102.673 1.00 54.28 C
ATOM 14 N9 G A2479 91.280 115.562 101.319 1.00 52.51 N
ATOM 15 C8 G A2479 90.328 115.401 100.341 1.00 50.95 C
ATOM 16 N7 G A2479 90.603 116.054 99.246 1.00 50.68 N
ATOM 17 C5 G A2479 91.812 116.678 99.514 1.00 50.10 C
ATOM 18 C6 G A2479 92.600 117.529 98.710 1.00 49.84 C
ATOM 19 O6 G A2479 92.372 117.940 97.567 1.00 50.35 O
ATOM 20 N1 G A2479 93.762 117.914 99.364 1.00 49.21 N
ATOM 21 C2 G A2479 94.114 117.541 100.629 1.00 48.80 C
ATOM 22 N2 G A2479 95.283 118.002 101.077 1.00 49.32 N
ATOM 23 N3 G A2479 93.380 116.768 101.398 1.00 49.91 N
ATOM 24 C4 G A2479 92.251 116.371 100.781 1.00 51.01 C
ATOM 25 P G A2480 88.261 117.940 104.947 1.00 49.80 P
ATOM 26 OP1 G A2480 87.711 118.172 106.307 1.00 50.53 O
ATOM 27 OP2 G A2480 87.418 118.231 103.765 1.00 51.41 O
ATOM 28 O5' G A2480 89.607 118.783 104.813 1.00 48.55 O
TER

ATOM 1 O3' U B1926 98.419 117.284 103.484 1.00 52.02 O
ATOM 2 P A B1927 97.225 116.497 104.221 1.00 53.17 P
ATOM 3 OP1 A B1927 97.458 115.051 103.995 1.00 51.84 O
ATOM 4 OP2 A B1927 95.922 117.107 103.834 1.00 51.67 O
ATOM 5 O5' A B1927 97.455 116.785 105.767 1.00 52.91 O
ATOM 6 C5' A B1927 98.575 116.222 106.451 1.00 54.16 C
ATOM 7 C4' A B1927 98.121 115.549 107.717 1.00 54.98 C
ATOM 8 O4' A B1927 99.278 114.960 108.366 1.00 55.09 O
ATOM 9 C3' A B1927 97.485 116.474 108.744 1.00 54.89 C
ATOM 10 O3' A B1927 96.565 115.717 109.523 1.00 57.39 O
ATOM 11 C2' A B1927 98.683 116.873 109.595 1.00 54.73 C
ATOM 12 O2' A B1927 98.313 117.290 110.892 1.00 56.93 O
ATOM 13 C1' A B1927 99.479 115.567 109.624 1.00 55.14 C
ATOM 14 N9 A B1927 100.919 115.751 109.805 1.00 55.99 N
ATOM 15 C8 A B1927 101.795 116.406 108.971 1.00 55.98 C
ATOM 16 N7 A B1927 103.028 116.434 109.414 1.00 56.13 N
ATOM 17 C5 A B1927 102.966 115.742 110.615 1.00 56.71 C
ATOM 18 C6 A B1927 103.945 115.420 111.570 1.00 56.69 C
ATOM 19 N6 A B1927 105.228 115.773 111.462 1.00 54.95 N
ATOM 20 N1 A B1927 103.555 114.712 112.654 1.00 57.72 N
ATOM 21 C2 A B1927 102.264 114.359 112.763 1.00 57.93 C
ATOM 22 N3 A B1927 101.250 114.605 111.933 1.00 57.77 N
ATOM 23 C4 A B1927 101.673 115.308 110.865 1.00 57.35 C
ATOM 24 P C B1928 95.002 116.086 109.515 1.00 59.06 P
ATOM 25 OP1 C B1928 94.629 116.536 108.145 1.00 59.87 O
ATOM 26 OP2 C B1928 94.760 116.986 110.677 1.00 60.00 O
ATOM 27 O5' C B1928 94.303 114.685 109.820 1.00 58.33 O
TER

Atoms:
OP1: (87.921,111.195,104.123)
OP2: (86.937,112.254,106.263)
C3': (89.330,115.878,103.712)
C1': (91.261,115.014,102.673)
C5': (87.912,113.813,103.047)
O6: (92.372,117.940,97.567)
O4': (90.296,113.979,102.716)
C8: (90.328,115.401,100.341)
C2: (94.114,117.541,100.629)
C6: (92.600,117.529,98.710)
C5: (91.812,116.678,99.514)
C4: (92.251,116.371,100.781)
P: (86.916,112.087,104.782)
C4': (89.208,114.365,103.591)
C2': (90.839,116.058,103.710)
O2': (91.408,115.725,104.958)
N1: (93.762,117.914,99.364)
N2: (95.283,118.002,101.077)
N3: (93.380,116.768,101.398)
N7: (90.603,116.054,99.246)
N9: (91.280,115.562,101.319)
O5': (86.996,113.542,104.124)
O3': (88.740,116.400,104.899)
OP1: (97.458,115.051,103.995)
OP2: (95.922,117.107,103.834)
C3': (97.485,116.474,108.744)
C1': (99.479,115.567,109.624)
C5': (98.575,116.222,106.451)
O4': (99.278,114.960,108.366)
C8: (101.795,116.406,108.971)
O2': (98.313,117.290,110.892)
C6: (103.945,115.420,111.570)
C5: (102.966,115.742,110.615)
C4: (101.673,115.308,110.865)
P: (97.225,116.497,104.221)
C4': (98.121,115.549,107.717)
C2': (98.683,116.873,109.595)
C2: (102.264,114.359,112.763)
N1: (103.555,114.712,112.654)
N3: (101.250,114.605,111.933)
N6: (105.228,115.773,111.462)
N7: (103.028,116.434,109.414)
N9: (100.919,115.751,109.805)
O5': (97.455,116.785,105.767)
O3': (96.565,115.717,109.523)
Image (generated by PyMOL):
PyMOL image
show in jmol