ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:01920:01961

Extra

PDB:
ATOM 1 O3' A A1919 122.406 118.451 104.193 1.00 56.25 O
ATOM 2 P G A1920 121.837 119.305 105.434 1.00 57.21 P
ATOM 3 OP1 G A1920 122.988 120.049 106.020 1.00 57.57 O
ATOM 4 OP2 G A1920 121.007 118.424 106.300 1.00 56.37 O
ATOM 5 O5' G A1920 120.890 120.397 104.775 1.00 55.82 O
ATOM 6 C5' G A1920 119.698 120.828 105.436 1.00 53.10 C
ATOM 7 C4' G A1920 118.776 121.464 104.436 1.00 52.43 C
ATOM 8 O4' G A1920 118.548 120.535 103.347 1.00 51.74 O
ATOM 9 C3' G A1920 117.394 121.809 104.954 1.00 52.31 C
ATOM 10 O3' G A1920 117.417 123.097 105.567 1.00 54.50 O
ATOM 11 C2' G A1920 116.576 121.802 103.671 1.00 51.06 C
ATOM 12 O2' G A1920 116.803 122.976 102.912 1.00 52.55 O
ATOM 13 C1' G A1920 117.200 120.621 102.923 1.00 49.67 C
ATOM 14 N9 G A1920 116.558 119.330 103.181 1.00 47.82 N
ATOM 15 C8 G A1920 117.103 118.247 103.835 1.00 46.05 C
ATOM 16 N7 G A1920 116.281 117.237 103.930 1.00 45.38 N
ATOM 17 C5 G A1920 115.123 117.673 103.295 1.00 46.80 C
ATOM 18 C6 G A1920 113.873 117.011 103.081 1.00 46.10 C
ATOM 19 O6 G A1920 113.533 115.862 103.414 1.00 44.42 O
ATOM 20 N1 G A1920 112.976 117.828 102.400 1.00 44.87 N
ATOM 21 C2 G A1920 113.241 119.102 101.969 1.00 45.59 C
ATOM 22 N2 G A1920 112.247 119.729 101.327 1.00 47.54 N
ATOM 23 N3 G A1920 114.393 119.722 102.150 1.00 46.01 N
ATOM 24 C4 G A1920 115.281 118.959 102.819 1.00 46.63 C
ATOM 25 P C A1921 116.615 123.352 106.938 1.00 56.20 P
ATOM 26 OP1 C A1921 116.767 124.804 107.234 1.00 54.68 O
ATOM 27 OP2 C A1921 117.051 122.344 107.943 1.00 54.79 O
ATOM 28 O5' C A1921 115.091 123.032 106.580 1.00 56.26 O
TER

ATOM 1 O3' G B1960 111.359 122.143 99.413 1.00 44.93 O
ATOM 2 P A B1961 110.807 123.487 100.107 1.00 46.82 P
ATOM 3 OP1 A B1961 109.967 123.090 101.275 1.00 46.43 O
ATOM 4 OP2 A B1961 110.230 124.356 99.047 1.00 46.15 O
ATOM 5 O5' A B1961 112.122 124.216 100.644 1.00 48.21 O
ATOM 6 C5' A B1961 112.916 123.637 101.699 1.00 47.80 C
ATOM 7 C4' A B1961 114.176 124.445 101.916 1.00 48.11 C
ATOM 8 O4' A B1961 114.956 124.468 100.692 1.00 47.82 O
ATOM 9 C3' A B1961 114.004 125.917 102.246 1.00 49.01 C
ATOM 10 O3' A B1961 113.703 126.106 103.626 1.00 52.92 O
ATOM 11 C2' A B1961 115.375 126.478 101.883 1.00 48.66 C
ATOM 12 O2' A B1961 116.362 126.212 102.860 1.00 51.78 O
ATOM 13 C1' A B1961 115.710 125.666 100.633 1.00 45.86 C
ATOM 14 N9 A B1961 115.374 126.377 99.404 1.00 43.81 N
ATOM 15 C8 A B1961 114.299 126.206 98.567 1.00 42.94 C
ATOM 16 N7 A B1961 114.297 127.023 97.537 1.00 44.04 N
ATOM 17 C5 A B1961 115.452 127.780 97.708 1.00 43.85 C
ATOM 18 C6 A B1961 116.038 128.821 96.948 1.00 43.92 C
ATOM 19 N6 A B1961 115.532 129.292 95.808 1.00 45.67 N
ATOM 20 N1 A B1961 117.183 129.364 97.407 1.00 42.28 N
ATOM 21 C2 A B1961 117.704 128.888 98.541 1.00 41.92 C
ATOM 22 N3 A B1961 117.261 127.915 99.332 1.00 41.31 N
ATOM 23 C4 A B1961 116.119 127.395 98.855 1.00 43.28 C
ATOM 24 P U B1962 113.006 127.473 104.118 1.00 55.21 P
ATOM 25 OP1 U B1962 113.052 127.493 105.605 1.00 56.50 O
ATOM 26 OP2 U B1962 111.690 127.615 103.423 1.00 55.30 O
ATOM 27 O5' U B1962 113.976 128.619 103.590 1.00 54.33 O
TER

Atoms:
OP1: (122.988,120.049,106.020)
OP2: (121.007,118.424,106.300)
C3': (117.394,121.809,104.954)
C1': (117.200,120.621,102.923)
C5': (119.698,120.828,105.436)
O6: (113.533,115.862,103.414)
O4': (118.548,120.535,103.347)
C8: (117.103,118.247,103.835)
C2: (113.241,119.102,101.969)
C6: (113.873,117.011,103.081)
C5: (115.123,117.673,103.295)
C4: (115.281,118.959,102.819)
P: (121.837,119.305,105.434)
C4': (118.776,121.464,104.436)
C2': (116.576,121.802,103.671)
O2': (116.803,122.976,102.912)
N1: (112.976,117.828,102.400)
N2: (112.247,119.729,101.327)
N3: (114.393,119.722,102.150)
N7: (116.281,117.237,103.930)
N9: (116.558,119.330,103.181)
O5': (120.890,120.397,104.775)
O3': (117.417,123.097,105.567)
OP1: (109.967,123.090,101.275)
OP2: (110.230,124.356,99.047)
C3': (114.004,125.917,102.246)
C1': (115.710,125.666,100.633)
C5': (112.916,123.637,101.699)
O4': (114.956,124.468,100.692)
C8: (114.299,126.206,98.567)
O2': (116.362,126.212,102.860)
C6: (116.038,128.821,96.948)
C5: (115.452,127.780,97.708)
C4: (116.119,127.395,98.855)
P: (110.807,123.487,100.107)
C4': (114.176,124.445,101.916)
C2': (115.375,126.478,101.883)
C2: (117.704,128.888,98.541)
N1: (117.183,129.364,97.407)
N3: (117.261,127.915,99.332)
N6: (115.532,129.292,95.808)
N7: (114.297,127.023,97.537)
N9: (115.374,126.377,99.404)
O5': (112.122,124.216,100.644)
O3': (113.703,126.106,103.626)
Image (generated by PyMOL):
PyMOL image
show in jmol