Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1097:A1076
Extra
PDB:
ATOM 1 O3' G A1096 44.124 95.464 152.211 1.00 60.55 O
ATOM 2 P G A1097 44.248 96.214 150.811 1.00 56.47 P
ATOM 3 OP1 G A1097 44.480 95.119 149.848 1.00 56.95 O
ATOM 4 OP2 G A1097 45.263 97.286 150.966 1.00 55.22 O
ATOM 5 O5' G A1097 42.793 96.803 150.537 1.00 53.83 O
ATOM 6 C5' G A1097 42.446 98.160 150.874 1.00 49.92 C
ATOM 7 C4' G A1097 41.273 98.619 150.038 1.00 48.13 C
ATOM 8 O4' G A1097 41.679 98.656 148.648 1.00 48.20 O
ATOM 9 C3' G A1097 40.077 97.686 150.046 1.00 46.75 C
ATOM 10 O3' G A1097 39.258 97.930 151.186 1.00 45.04 O
ATOM 11 C2' G A1097 39.401 98.022 148.723 1.00 46.68 C
ATOM 12 O2' G A1097 38.704 99.251 148.776 1.00 46.91 O
ATOM 13 C1' G A1097 40.616 98.220 147.821 1.00 46.08 C
ATOM 14 N9 G A1097 41.033 97.001 147.137 1.00 45.30 N
ATOM 15 C8 G A1097 42.108 96.199 147.437 1.00 44.89 C
ATOM 16 N7 G A1097 42.215 95.171 146.645 1.00 45.15 N
ATOM 17 C5 G A1097 41.146 95.304 145.772 1.00 44.72 C
ATOM 18 C6 G A1097 40.742 94.492 144.697 1.00 44.89 C
ATOM 19 O6 G A1097 41.257 93.449 144.291 1.00 44.06 O
ATOM 20 N1 G A1097 39.609 95.000 144.069 1.00 45.51 N
ATOM 21 C2 G A1097 38.949 96.147 144.441 1.00 45.46 C
ATOM 22 N2 G A1097 37.869 96.493 143.716 1.00 45.50 N
ATOM 23 N3 G A1097 39.318 96.905 145.450 1.00 45.70 N
ATOM 24 C4 G A1097 40.414 96.431 146.063 1.00 44.70 C
ATOM 25 P U A1098 38.629 96.693 151.981 1.00 44.08 P
ATOM 26 OP1 U A1098 37.900 97.228 153.161 1.00 43.42 O
ATOM 27 OP2 U A1098 39.718 95.697 152.178 1.00 43.91 O
ATOM 28 O5' U A1098 37.548 96.119 150.965 1.00 41.60 O
TER
ATOM 1 O3' U B1075 35.409 99.039 142.713 1.00 38.49 O
ATOM 2 P A B1076 35.459 99.734 144.163 1.00 40.25 P
ATOM 3 OP1 A B1076 36.790 99.428 144.698 1.00 38.08 O
ATOM 4 OP2 A B1076 34.249 99.393 144.955 1.00 40.52 O
ATOM 5 O5' A B1076 35.448 101.290 143.859 1.00 38.17 O
ATOM 6 C5' A B1076 36.582 101.929 143.260 1.00 38.70 C
ATOM 7 C4' A B1076 36.347 103.418 143.184 1.00 38.84 C
ATOM 8 O4' A B1076 35.149 103.651 142.397 1.00 40.33 O
ATOM 9 C3' A B1076 36.099 104.088 144.526 1.00 37.57 C
ATOM 10 O3' A B1076 36.557 105.423 144.485 1.00 37.06 O
ATOM 11 C2' A B1076 34.579 104.070 144.628 1.00 38.44 C
ATOM 12 O2' A B1076 34.082 105.126 145.406 1.00 40.87 O
ATOM 13 C1' A B1076 34.171 104.301 143.181 1.00 38.99 C
ATOM 14 N9 A B1076 32.851 103.757 142.842 1.00 38.91 N
ATOM 15 C8 A B1076 32.484 102.438 142.765 1.00 39.85 C
ATOM 16 N7 A B1076 31.221 102.251 142.461 1.00 38.76 N
ATOM 17 C5 A B1076 30.722 103.531 142.316 1.00 37.03 C
ATOM 18 C6 A B1076 29.439 104.009 142.003 1.00 37.46 C
ATOM 19 N6 A B1076 28.394 103.220 141.754 1.00 37.05 N
ATOM 20 N1 A B1076 29.263 105.346 141.953 1.00 37.26 N
ATOM 21 C2 A B1076 30.317 106.139 142.201 1.00 37.67 C
ATOM 22 N3 A B1076 31.572 105.811 142.499 1.00 37.79 N
ATOM 23 C4 A B1076 31.713 104.473 142.545 1.00 38.03 C
ATOM 24 P A B1077 38.034 105.783 144.997 1.00 38.54 P
ATOM 25 OP1 A B1077 38.521 104.777 145.958 1.00 38.74 O
ATOM 26 OP2 A B1077 38.062 107.222 145.354 1.00 35.84 O
ATOM 27 O5' A B1077 38.922 105.547 143.703 1.00 39.45 O
TER
ATOM 2 P G A1097 44.248 96.214 150.811 1.00 56.47 P
ATOM 3 OP1 G A1097 44.480 95.119 149.848 1.00 56.95 O
ATOM 4 OP2 G A1097 45.263 97.286 150.966 1.00 55.22 O
ATOM 5 O5' G A1097 42.793 96.803 150.537 1.00 53.83 O
ATOM 6 C5' G A1097 42.446 98.160 150.874 1.00 49.92 C
ATOM 7 C4' G A1097 41.273 98.619 150.038 1.00 48.13 C
ATOM 8 O4' G A1097 41.679 98.656 148.648 1.00 48.20 O
ATOM 9 C3' G A1097 40.077 97.686 150.046 1.00 46.75 C
ATOM 10 O3' G A1097 39.258 97.930 151.186 1.00 45.04 O
ATOM 11 C2' G A1097 39.401 98.022 148.723 1.00 46.68 C
ATOM 12 O2' G A1097 38.704 99.251 148.776 1.00 46.91 O
ATOM 13 C1' G A1097 40.616 98.220 147.821 1.00 46.08 C
ATOM 14 N9 G A1097 41.033 97.001 147.137 1.00 45.30 N
ATOM 15 C8 G A1097 42.108 96.199 147.437 1.00 44.89 C
ATOM 16 N7 G A1097 42.215 95.171 146.645 1.00 45.15 N
ATOM 17 C5 G A1097 41.146 95.304 145.772 1.00 44.72 C
ATOM 18 C6 G A1097 40.742 94.492 144.697 1.00 44.89 C
ATOM 19 O6 G A1097 41.257 93.449 144.291 1.00 44.06 O
ATOM 20 N1 G A1097 39.609 95.000 144.069 1.00 45.51 N
ATOM 21 C2 G A1097 38.949 96.147 144.441 1.00 45.46 C
ATOM 22 N2 G A1097 37.869 96.493 143.716 1.00 45.50 N
ATOM 23 N3 G A1097 39.318 96.905 145.450 1.00 45.70 N
ATOM 24 C4 G A1097 40.414 96.431 146.063 1.00 44.70 C
ATOM 25 P U A1098 38.629 96.693 151.981 1.00 44.08 P
ATOM 26 OP1 U A1098 37.900 97.228 153.161 1.00 43.42 O
ATOM 27 OP2 U A1098 39.718 95.697 152.178 1.00 43.91 O
ATOM 28 O5' U A1098 37.548 96.119 150.965 1.00 41.60 O
TER
ATOM 1 O3' U B1075 35.409 99.039 142.713 1.00 38.49 O
ATOM 2 P A B1076 35.459 99.734 144.163 1.00 40.25 P
ATOM 3 OP1 A B1076 36.790 99.428 144.698 1.00 38.08 O
ATOM 4 OP2 A B1076 34.249 99.393 144.955 1.00 40.52 O
ATOM 5 O5' A B1076 35.448 101.290 143.859 1.00 38.17 O
ATOM 6 C5' A B1076 36.582 101.929 143.260 1.00 38.70 C
ATOM 7 C4' A B1076 36.347 103.418 143.184 1.00 38.84 C
ATOM 8 O4' A B1076 35.149 103.651 142.397 1.00 40.33 O
ATOM 9 C3' A B1076 36.099 104.088 144.526 1.00 37.57 C
ATOM 10 O3' A B1076 36.557 105.423 144.485 1.00 37.06 O
ATOM 11 C2' A B1076 34.579 104.070 144.628 1.00 38.44 C
ATOM 12 O2' A B1076 34.082 105.126 145.406 1.00 40.87 O
ATOM 13 C1' A B1076 34.171 104.301 143.181 1.00 38.99 C
ATOM 14 N9 A B1076 32.851 103.757 142.842 1.00 38.91 N
ATOM 15 C8 A B1076 32.484 102.438 142.765 1.00 39.85 C
ATOM 16 N7 A B1076 31.221 102.251 142.461 1.00 38.76 N
ATOM 17 C5 A B1076 30.722 103.531 142.316 1.00 37.03 C
ATOM 18 C6 A B1076 29.439 104.009 142.003 1.00 37.46 C
ATOM 19 N6 A B1076 28.394 103.220 141.754 1.00 37.05 N
ATOM 20 N1 A B1076 29.263 105.346 141.953 1.00 37.26 N
ATOM 21 C2 A B1076 30.317 106.139 142.201 1.00 37.67 C
ATOM 22 N3 A B1076 31.572 105.811 142.499 1.00 37.79 N
ATOM 23 C4 A B1076 31.713 104.473 142.545 1.00 38.03 C
ATOM 24 P A B1077 38.034 105.783 144.997 1.00 38.54 P
ATOM 25 OP1 A B1077 38.521 104.777 145.958 1.00 38.74 O
ATOM 26 OP2 A B1077 38.062 107.222 145.354 1.00 35.84 O
ATOM 27 O5' A B1077 38.922 105.547 143.703 1.00 39.45 O
TER
Atoms:
OP1: (44.480,95.119,149.848)
OP2: (45.263,97.286,150.966)
C3': (40.077,97.686,150.046)
C1': (40.616,98.220,147.821)
C5': (42.446,98.160,150.874)
O6: (41.257,93.449,144.291)
O4': (41.679,98.656,148.648)
C8: (42.108,96.199,147.437)
C2: (38.949,96.147,144.441)
C6: (40.742,94.492,144.697)
C5: (41.146,95.304,145.772)
C4: (40.414,96.431,146.063)
P: (44.248,96.214,150.811)
C4': (41.273,98.619,150.038)
C2': (39.401,98.022,148.723)
O2': (38.704,99.251,148.776)
N1: (39.609,95.000,144.069)
N2: (37.869,96.493,143.716)
N3: (39.318,96.905,145.450)
N7: (42.215,95.171,146.645)
N9: (41.033,97.001,147.137)
O5': (42.793,96.803,150.537)
O3': (39.258,97.930,151.186)
OP2: (45.263,97.286,150.966)
C3': (40.077,97.686,150.046)
C1': (40.616,98.220,147.821)
C5': (42.446,98.160,150.874)
O6: (41.257,93.449,144.291)
O4': (41.679,98.656,148.648)
C8: (42.108,96.199,147.437)
C2: (38.949,96.147,144.441)
C6: (40.742,94.492,144.697)
C5: (41.146,95.304,145.772)
C4: (40.414,96.431,146.063)
P: (44.248,96.214,150.811)
C4': (41.273,98.619,150.038)
C2': (39.401,98.022,148.723)
O2': (38.704,99.251,148.776)
N1: (39.609,95.000,144.069)
N2: (37.869,96.493,143.716)
N3: (39.318,96.905,145.450)
N7: (42.215,95.171,146.645)
N9: (41.033,97.001,147.137)
O5': (42.793,96.803,150.537)
O3': (39.258,97.930,151.186)
OP1: (36.790,99.428,144.698)
OP2: (34.249,99.393,144.955)
C3': (36.099,104.088,144.526)
C1': (34.171,104.301,143.181)
C5': (36.582,101.929,143.260)
O4': (35.149,103.651,142.397)
C8: (32.484,102.438,142.765)
O2': (34.082,105.126,145.406)
C6: (29.439,104.009,142.003)
C5: (30.722,103.531,142.316)
C4: (31.713,104.473,142.545)
P: (35.459,99.734,144.163)
C4': (36.347,103.418,143.184)
C2': (34.579,104.070,144.628)
C2: (30.317,106.139,142.201)
N1: (29.263,105.346,141.953)
N3: (31.572,105.811,142.499)
N6: (28.394,103.220,141.754)
N7: (31.221,102.251,142.461)
N9: (32.851,103.757,142.842)
O5': (35.448,101.290,143.859)
O3': (36.557,105.423,144.485)
OP2: (34.249,99.393,144.955)
C3': (36.099,104.088,144.526)
C1': (34.171,104.301,143.181)
C5': (36.582,101.929,143.260)
O4': (35.149,103.651,142.397)
C8: (32.484,102.438,142.765)
O2': (34.082,105.126,145.406)
C6: (29.439,104.009,142.003)
C5: (30.722,103.531,142.316)
C4: (31.713,104.473,142.545)
P: (35.459,99.734,144.163)
C4': (36.347,103.418,143.184)
C2': (34.579,104.070,144.628)
C2: (30.317,106.139,142.201)
N1: (29.263,105.346,141.953)
N3: (31.572,105.811,142.499)
N6: (28.394,103.220,141.754)
N7: (31.221,102.251,142.461)
N9: (32.851,103.757,142.842)
O5': (35.448,101.290,143.859)
O3': (36.557,105.423,144.485)
Image (generated by PyMOL):