ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0414:0182

Extra

PDB:
ATOM 1 O3' U A 413 72.502 82.670 13.821 1.00 56.69 O
ATOM 2 P G A 414 72.913 83.960 12.952 1.00 55.78 P
ATOM 3 OP1 G A 414 71.733 84.313 12.122 1.00 56.46 O
ATOM 4 OP2 G A 414 74.218 83.691 12.309 1.00 54.42 O
ATOM 5 O5' G A 414 73.124 85.114 14.035 1.00 56.63 O
ATOM 6 C5' G A 414 72.022 85.592 14.836 1.00 53.75 C
ATOM 7 C4' G A 414 72.485 86.682 15.781 1.00 53.72 C
ATOM 8 O4' G A 414 73.485 86.162 16.695 1.00 52.68 O
ATOM 9 C3' G A 414 73.165 87.883 15.142 1.00 52.60 C
ATOM 10 O3' G A 414 72.207 88.803 14.639 1.00 52.88 O
ATOM 11 C2' G A 414 73.939 88.464 16.315 1.00 52.20 C
ATOM 12 O2' G A 414 73.094 89.174 17.204 1.00 52.08 O
ATOM 13 C1' G A 414 74.420 87.186 17.004 1.00 51.76 C
ATOM 14 N9 G A 414 75.739 86.763 16.545 1.00 51.78 N
ATOM 15 C8 G A 414 76.026 85.780 15.625 1.00 51.43 C
ATOM 16 N7 G A 414 77.306 85.619 15.428 1.00 50.92 N
ATOM 17 C5 G A 414 77.903 86.557 16.261 1.00 52.19 C
ATOM 18 C6 G A 414 79.272 86.859 16.474 1.00 53.33 C
ATOM 19 O6 G A 414 80.265 86.346 15.944 1.00 54.21 O
ATOM 20 N1 G A 414 79.433 87.878 17.406 1.00 52.93 N
ATOM 21 C2 G A 414 78.411 88.533 18.045 1.00 52.52 C
ATOM 22 N2 G A 414 78.773 89.488 18.910 1.00 51.01 N
ATOM 23 N3 G A 414 77.129 88.270 17.850 1.00 51.94 N
ATOM 24 C4 G A 414 76.949 87.274 16.955 1.00 52.21 C
ATOM 25 P C A 415 72.574 89.728 13.381 1.00 51.16 P
ATOM 26 OP1 C A 415 71.361 90.535 13.085 1.00 49.96 O
ATOM 27 OP2 C A 415 73.191 88.895 12.315 1.00 52.28 O
ATOM 28 O5' C A 415 73.695 90.698 13.947 1.00 51.89 O
TER

ATOM 1 O3' A B 181 77.399 94.005 19.292 1.00 52.39 O
ATOM 2 P A B 182 76.980 92.941 20.426 1.00 52.47 P
ATOM 3 OP1 A B 182 77.916 93.114 21.563 1.00 51.23 O
ATOM 4 OP2 A B 182 76.840 91.606 19.798 1.00 53.27 O
ATOM 5 O5' A B 182 75.525 93.420 20.861 1.00 52.03 O
ATOM 6 C5' A B 182 75.344 94.648 21.586 1.00 49.55 C
ATOM 7 C4' A B 182 73.875 94.894 21.847 1.00 49.85 C
ATOM 8 O4' A B 182 73.184 95.141 20.594 1.00 48.81 O
ATOM 9 C3' A B 182 73.106 93.744 22.479 1.00 48.68 C
ATOM 10 O3' A B 182 73.283 93.714 23.888 1.00 49.60 O
ATOM 11 C2' A B 182 71.677 94.084 22.091 1.00 47.96 C
ATOM 12 O2' A B 182 71.160 95.121 22.887 1.00 45.52 O
ATOM 13 C1' A B 182 71.872 94.602 20.661 1.00 49.33 C
ATOM 14 N9 A B 182 71.777 93.529 19.669 1.00 49.99 N
ATOM 15 C8 A B 182 72.799 92.994 18.924 1.00 50.44 C
ATOM 16 N7 A B 182 72.425 92.013 18.145 1.00 52.16 N
ATOM 17 C5 A B 182 71.065 91.893 18.386 1.00 50.97 C
ATOM 18 C6 A B 182 70.093 91.020 17.879 1.00 51.73 C
ATOM 19 N6 A B 182 70.355 90.054 16.992 1.00 51.57 N
ATOM 20 N1 A B 182 68.823 91.169 18.324 1.00 51.99 N
ATOM 21 C2 A B 182 68.565 92.128 19.217 1.00 48.90 C
ATOM 22 N3 A B 182 69.396 93.005 19.771 1.00 51.03 N
ATOM 23 C4 A B 182 70.648 92.831 19.310 1.00 49.72 C
ATOM 24 P C B 183 73.416 92.304 24.654 1.00 47.90 P
ATOM 25 OP1 C B 183 73.557 92.664 26.086 1.00 49.85 O
ATOM 26 OP2 C B 183 74.459 91.485 24.007 1.00 45.72 O
ATOM 27 O5' C B 183 71.987 91.628 24.440 1.00 47.22 O
TER

Atoms:
OP1: (71.733,84.313,12.122)
OP2: (74.218,83.691,12.309)
C3': (73.165,87.883,15.142)
C1': (74.420,87.186,17.004)
C5': (72.022,85.592,14.836)
O6: (80.265,86.346,15.944)
O4': (73.485,86.162,16.695)
C8: (76.026,85.780,15.625)
C2: (78.411,88.533,18.045)
C6: (79.272,86.859,16.474)
C5: (77.903,86.557,16.261)
C4: (76.949,87.274,16.955)
P: (72.913,83.960,12.952)
C4': (72.485,86.682,15.781)
C2': (73.939,88.464,16.315)
O2': (73.094,89.174,17.204)
N1: (79.433,87.878,17.406)
N2: (78.773,89.488,18.910)
N3: (77.129,88.270,17.850)
N7: (77.306,85.619,15.428)
N9: (75.739,86.763,16.545)
O5': (73.124,85.114,14.035)
O3': (72.207,88.803,14.639)
OP1: (77.916,93.114,21.563)
OP2: (76.840,91.606,19.798)
C3': (73.106,93.744,22.479)
C1': (71.872,94.602,20.661)
C5': (75.344,94.648,21.586)
O4': (73.184,95.141,20.594)
C8: (72.799,92.994,18.924)
O2': (71.160,95.121,22.887)
C6: (70.093,91.020,17.879)
C5: (71.065,91.893,18.386)
C4: (70.648,92.831,19.310)
P: (76.980,92.941,20.426)
C4': (73.875,94.894,21.847)
C2': (71.677,94.084,22.091)
C2: (68.565,92.128,19.217)
N1: (68.823,91.169,18.324)
N3: (69.396,93.005,19.771)
N6: (70.355,90.054,16.992)
N7: (72.425,92.013,18.145)
N9: (71.777,93.529,19.669)
O5': (75.525,93.420,20.861)
O3': (73.283,93.714,23.888)
Image (generated by PyMOL):
PyMOL image
show in jmol