Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2440:A2443
Extra
PDB:
ATOM 1 O3' G A2439 -83.701 -66.651 14.070 1.00 0.01 O
ATOM 2 P G A2440 -82.905 -67.938 13.532 1.00 0.01 P
ATOM 3 OP1 G A2440 -83.622 -69.115 13.984 1.00 0.01 O
ATOM 4 OP2 G A2440 -81.505 -67.787 13.899 1.00 0.01 O
ATOM 5 O5' G A2440 -83.055 -67.821 11.986 1.00 0.01 O
ATOM 6 C5' G A2440 -82.633 -66.663 11.304 1.00 0.01 C
ATOM 7 C4' G A2440 -83.772 -66.016 10.576 1.00 0.01 C
ATOM 8 O4' G A2440 -83.283 -64.869 9.858 1.00 0.01 O
ATOM 9 C3' G A2440 -84.461 -66.874 9.534 1.00 0.01 C
ATOM 10 O3' G A2440 -85.786 -66.426 9.399 1.00 0.01 O
ATOM 11 C2' G A2440 -83.745 -66.469 8.290 1.00 0.01 C
ATOM 12 O2' G A2440 -84.456 -66.757 7.120 1.00 0.01 O
ATOM 13 C1' G A2440 -83.673 -64.985 8.531 1.00 0.01 C
ATOM 14 N9 G A2440 -82.721 -64.288 7.710 1.00 0.01 N
ATOM 15 C8 G A2440 -81.420 -64.602 7.570 1.00 0.01 C
ATOM 16 N7 G A2440 -80.828 -63.800 6.759 1.00 0.01 N
ATOM 17 C5 G A2440 -81.810 -62.943 6.363 1.00 0.01 C
ATOM 18 C6 G A2440 -81.692 -61.880 5.474 1.00 0.01 C
ATOM 19 O6 G A2440 -80.642 -61.540 4.909 1.00 0.01 O
ATOM 20 N1 G A2440 -82.922 -61.220 5.331 1.00 0.01 N
ATOM 21 C2 G A2440 -84.095 -61.560 5.986 1.00 0.01 C
ATOM 22 N2 G A2440 -85.159 -60.784 5.692 1.00 0.01 N
ATOM 23 N3 G A2440 -84.195 -62.583 6.826 1.00 0.01 N
ATOM 24 C4 G A2440 -83.008 -63.210 6.945 1.00 0.01 C
ATOM 25 P A A2441 -87.001 -67.281 9.927 1.00 0.01 P
ATOM 26 OP1 A A2441 -86.567 -68.647 9.966 1.00 0.01 O
ATOM 27 OP2 A A2441 -88.149 -66.954 9.084 1.00 0.01 O
ATOM 28 O5' A A2441 -87.198 -66.707 11.396 1.00 0.01 O
TER
ATOM 1 O3' U B2442 -88.472 -59.806 8.369 1.00 0.01 O
ATOM 2 P A B2443 -89.041 -59.877 6.881 1.00 0.01 P
ATOM 3 OP1 A B2443 -90.480 -59.881 6.971 1.00 0.01 O
ATOM 4 OP2 A B2443 -88.373 -60.989 6.209 1.00 0.01 O
ATOM 5 O5' A B2443 -88.558 -58.519 6.258 1.00 0.01 O
ATOM 6 C5' A B2443 -89.411 -57.405 6.194 1.00 0.01 C
ATOM 7 C4' A B2443 -88.635 -56.126 6.114 1.00 0.01 C
ATOM 8 O4' A B2443 -87.747 -56.028 7.236 1.00 0.01 O
ATOM 9 C3' A B2443 -87.707 -55.981 4.946 1.00 0.01 C
ATOM 10 O3' A B2443 -88.357 -55.663 3.743 1.00 0.01 O
ATOM 11 C2' A B2443 -86.783 -54.896 5.436 1.00 0.01 C
ATOM 12 O2' A B2443 -87.432 -53.635 5.407 1.00 0.01 O
ATOM 13 C1' A B2443 -86.613 -55.301 6.880 1.00 0.01 C
ATOM 14 N9 A B2443 -85.432 -56.138 7.087 1.00 0.01 N
ATOM 15 C8 A B2443 -85.396 -57.415 7.498 1.00 0.01 C
ATOM 16 N7 A B2443 -84.199 -57.900 7.629 1.00 0.01 N
ATOM 17 C5 A B2443 -83.370 -56.850 7.289 1.00 0.01 C
ATOM 18 C6 A B2443 -81.965 -56.717 7.217 1.00 0.01 C
ATOM 19 N6 A B2443 -81.099 -57.702 7.501 1.00 0.01 N
ATOM 20 N1 A B2443 -81.465 -55.535 6.834 1.00 0.01 N
ATOM 21 C2 A B2443 -82.316 -54.576 6.552 1.00 0.01 C
ATOM 22 N3 A B2443 -83.630 -54.585 6.581 1.00 0.01 N
ATOM 23 C4 A B2443 -84.121 -55.761 6.959 1.00 0.01 C
ATOM 24 P A B2444 -87.795 -56.262 2.394 1.00 0.01 P
ATOM 25 OP1 A B2444 -88.708 -55.894 1.329 1.00 0.01 O
ATOM 26 OP2 A B2444 -87.553 -57.663 2.642 1.00 0.01 O
ATOM 27 O5' A B2444 -86.434 -55.500 2.210 1.00 0.01 O
TER
ATOM 2 P G A2440 -82.905 -67.938 13.532 1.00 0.01 P
ATOM 3 OP1 G A2440 -83.622 -69.115 13.984 1.00 0.01 O
ATOM 4 OP2 G A2440 -81.505 -67.787 13.899 1.00 0.01 O
ATOM 5 O5' G A2440 -83.055 -67.821 11.986 1.00 0.01 O
ATOM 6 C5' G A2440 -82.633 -66.663 11.304 1.00 0.01 C
ATOM 7 C4' G A2440 -83.772 -66.016 10.576 1.00 0.01 C
ATOM 8 O4' G A2440 -83.283 -64.869 9.858 1.00 0.01 O
ATOM 9 C3' G A2440 -84.461 -66.874 9.534 1.00 0.01 C
ATOM 10 O3' G A2440 -85.786 -66.426 9.399 1.00 0.01 O
ATOM 11 C2' G A2440 -83.745 -66.469 8.290 1.00 0.01 C
ATOM 12 O2' G A2440 -84.456 -66.757 7.120 1.00 0.01 O
ATOM 13 C1' G A2440 -83.673 -64.985 8.531 1.00 0.01 C
ATOM 14 N9 G A2440 -82.721 -64.288 7.710 1.00 0.01 N
ATOM 15 C8 G A2440 -81.420 -64.602 7.570 1.00 0.01 C
ATOM 16 N7 G A2440 -80.828 -63.800 6.759 1.00 0.01 N
ATOM 17 C5 G A2440 -81.810 -62.943 6.363 1.00 0.01 C
ATOM 18 C6 G A2440 -81.692 -61.880 5.474 1.00 0.01 C
ATOM 19 O6 G A2440 -80.642 -61.540 4.909 1.00 0.01 O
ATOM 20 N1 G A2440 -82.922 -61.220 5.331 1.00 0.01 N
ATOM 21 C2 G A2440 -84.095 -61.560 5.986 1.00 0.01 C
ATOM 22 N2 G A2440 -85.159 -60.784 5.692 1.00 0.01 N
ATOM 23 N3 G A2440 -84.195 -62.583 6.826 1.00 0.01 N
ATOM 24 C4 G A2440 -83.008 -63.210 6.945 1.00 0.01 C
ATOM 25 P A A2441 -87.001 -67.281 9.927 1.00 0.01 P
ATOM 26 OP1 A A2441 -86.567 -68.647 9.966 1.00 0.01 O
ATOM 27 OP2 A A2441 -88.149 -66.954 9.084 1.00 0.01 O
ATOM 28 O5' A A2441 -87.198 -66.707 11.396 1.00 0.01 O
TER
ATOM 1 O3' U B2442 -88.472 -59.806 8.369 1.00 0.01 O
ATOM 2 P A B2443 -89.041 -59.877 6.881 1.00 0.01 P
ATOM 3 OP1 A B2443 -90.480 -59.881 6.971 1.00 0.01 O
ATOM 4 OP2 A B2443 -88.373 -60.989 6.209 1.00 0.01 O
ATOM 5 O5' A B2443 -88.558 -58.519 6.258 1.00 0.01 O
ATOM 6 C5' A B2443 -89.411 -57.405 6.194 1.00 0.01 C
ATOM 7 C4' A B2443 -88.635 -56.126 6.114 1.00 0.01 C
ATOM 8 O4' A B2443 -87.747 -56.028 7.236 1.00 0.01 O
ATOM 9 C3' A B2443 -87.707 -55.981 4.946 1.00 0.01 C
ATOM 10 O3' A B2443 -88.357 -55.663 3.743 1.00 0.01 O
ATOM 11 C2' A B2443 -86.783 -54.896 5.436 1.00 0.01 C
ATOM 12 O2' A B2443 -87.432 -53.635 5.407 1.00 0.01 O
ATOM 13 C1' A B2443 -86.613 -55.301 6.880 1.00 0.01 C
ATOM 14 N9 A B2443 -85.432 -56.138 7.087 1.00 0.01 N
ATOM 15 C8 A B2443 -85.396 -57.415 7.498 1.00 0.01 C
ATOM 16 N7 A B2443 -84.199 -57.900 7.629 1.00 0.01 N
ATOM 17 C5 A B2443 -83.370 -56.850 7.289 1.00 0.01 C
ATOM 18 C6 A B2443 -81.965 -56.717 7.217 1.00 0.01 C
ATOM 19 N6 A B2443 -81.099 -57.702 7.501 1.00 0.01 N
ATOM 20 N1 A B2443 -81.465 -55.535 6.834 1.00 0.01 N
ATOM 21 C2 A B2443 -82.316 -54.576 6.552 1.00 0.01 C
ATOM 22 N3 A B2443 -83.630 -54.585 6.581 1.00 0.01 N
ATOM 23 C4 A B2443 -84.121 -55.761 6.959 1.00 0.01 C
ATOM 24 P A B2444 -87.795 -56.262 2.394 1.00 0.01 P
ATOM 25 OP1 A B2444 -88.708 -55.894 1.329 1.00 0.01 O
ATOM 26 OP2 A B2444 -87.553 -57.663 2.642 1.00 0.01 O
ATOM 27 O5' A B2444 -86.434 -55.500 2.210 1.00 0.01 O
TER
Atoms:
OP1: (-83.622,-69.115,13.984)
OP2: (-81.505,-67.787,13.899)
C3': (-84.461,-66.874,9.534)
C1': (-83.673,-64.985,8.531)
C5': (-82.633,-66.663,11.304)
O6: (-80.642,-61.540,4.909)
O4': (-83.283,-64.869,9.858)
C8: (-81.420,-64.602,7.570)
C2: (-84.095,-61.560,5.986)
C6: (-81.692,-61.880,5.474)
C5: (-81.810,-62.943,6.363)
C4: (-83.008,-63.210,6.945)
P: (-82.905,-67.938,13.532)
C4': (-83.772,-66.016,10.576)
C2': (-83.745,-66.469,8.290)
O2': (-84.456,-66.757,7.120)
N1: (-82.922,-61.220,5.331)
N2: (-85.159,-60.784,5.692)
N3: (-84.195,-62.583,6.826)
N7: (-80.828,-63.800,6.759)
N9: (-82.721,-64.288,7.710)
O5': (-83.055,-67.821,11.986)
O3': (-85.786,-66.426,9.399)
OP2: (-81.505,-67.787,13.899)
C3': (-84.461,-66.874,9.534)
C1': (-83.673,-64.985,8.531)
C5': (-82.633,-66.663,11.304)
O6: (-80.642,-61.540,4.909)
O4': (-83.283,-64.869,9.858)
C8: (-81.420,-64.602,7.570)
C2: (-84.095,-61.560,5.986)
C6: (-81.692,-61.880,5.474)
C5: (-81.810,-62.943,6.363)
C4: (-83.008,-63.210,6.945)
P: (-82.905,-67.938,13.532)
C4': (-83.772,-66.016,10.576)
C2': (-83.745,-66.469,8.290)
O2': (-84.456,-66.757,7.120)
N1: (-82.922,-61.220,5.331)
N2: (-85.159,-60.784,5.692)
N3: (-84.195,-62.583,6.826)
N7: (-80.828,-63.800,6.759)
N9: (-82.721,-64.288,7.710)
O5': (-83.055,-67.821,11.986)
O3': (-85.786,-66.426,9.399)
OP1: (-90.480,-59.881,6.971)
OP2: (-88.373,-60.989,6.209)
C3': (-87.707,-55.981,4.946)
C1': (-86.613,-55.301,6.880)
C5': (-89.411,-57.405,6.194)
O4': (-87.747,-56.028,7.236)
C8: (-85.396,-57.415,7.498)
O2': (-87.432,-53.635,5.407)
C6: (-81.965,-56.717,7.217)
C5: (-83.370,-56.850,7.289)
C4: (-84.121,-55.761,6.959)
P: (-89.041,-59.877,6.881)
C4': (-88.635,-56.126,6.114)
C2': (-86.783,-54.896,5.436)
C2: (-82.316,-54.576,6.552)
N1: (-81.465,-55.535,6.834)
N3: (-83.630,-54.585,6.581)
N6: (-81.099,-57.702,7.501)
N7: (-84.199,-57.900,7.629)
N9: (-85.432,-56.138,7.087)
O5': (-88.558,-58.519,6.258)
O3': (-88.357,-55.663,3.743)
OP2: (-88.373,-60.989,6.209)
C3': (-87.707,-55.981,4.946)
C1': (-86.613,-55.301,6.880)
C5': (-89.411,-57.405,6.194)
O4': (-87.747,-56.028,7.236)
C8: (-85.396,-57.415,7.498)
O2': (-87.432,-53.635,5.407)
C6: (-81.965,-56.717,7.217)
C5: (-83.370,-56.850,7.289)
C4: (-84.121,-55.761,6.959)
P: (-89.041,-59.877,6.881)
C4': (-88.635,-56.126,6.114)
C2': (-86.783,-54.896,5.436)
C2: (-82.316,-54.576,6.552)
N1: (-81.465,-55.535,6.834)
N3: (-83.630,-54.585,6.581)
N6: (-81.099,-57.702,7.501)
N7: (-84.199,-57.900,7.629)
N9: (-85.432,-56.138,7.087)
O5': (-88.558,-58.519,6.258)
O3': (-88.357,-55.663,3.743)
Image (generated by PyMOL):