Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0885:0909
Extra
PDB:
ATOM 1 O3' A A 884 60.318 106.368 72.059 1.00 27.69 O
ATOM 2 P G A 885 58.719 106.289 72.081 1.00 27.51 P
ATOM 3 OP1 G A 885 58.344 105.135 71.232 1.00 28.94 O
ATOM 4 OP2 G A 885 58.140 107.619 71.804 1.00 23.19 O
ATOM 5 O5' G A 885 58.410 105.951 73.604 1.00 26.64 O
ATOM 6 C5' G A 885 57.691 104.770 73.970 1.00 24.28 C
ATOM 7 C4' G A 885 58.509 103.933 74.918 1.00 23.06 C
ATOM 8 O4' G A 885 59.418 103.091 74.158 1.00 23.50 O
ATOM 9 C3' G A 885 59.378 104.699 75.918 1.00 23.02 C
ATOM 10 O3' G A 885 59.148 104.212 77.231 1.00 21.30 O
ATOM 11 C2' G A 885 60.801 104.377 75.446 1.00 23.20 C
ATOM 12 O2' G A 885 61.779 104.356 76.464 1.00 22.59 O
ATOM 13 C1' G A 885 60.622 102.981 74.868 1.00 21.24 C
ATOM 14 N9 G A 885 61.694 102.593 73.954 1.00 22.57 N
ATOM 15 C8 G A 885 62.052 103.197 72.769 1.00 20.87 C
ATOM 16 N7 G A 885 63.110 102.662 72.224 1.00 19.90 N
ATOM 17 C5 G A 885 63.465 101.636 73.091 1.00 21.52 C
ATOM 18 C6 G A 885 64.549 100.719 73.044 1.00 22.50 C
ATOM 19 O6 G A 885 65.464 100.644 72.223 1.00 20.95 O
ATOM 20 N1 G A 885 64.513 99.833 74.110 1.00 23.05 N
ATOM 21 C2 G A 885 63.578 99.837 75.108 1.00 24.39 C
ATOM 22 N2 G A 885 63.718 98.900 76.056 1.00 25.91 N
ATOM 23 N3 G A 885 62.580 100.696 75.177 1.00 23.83 N
ATOM 24 C4 G A 885 62.585 101.561 74.145 1.00 21.62 C
ATOM 25 P C A 886 57.985 104.870 78.117 1.00 22.93 P
ATOM 26 OP1 C A 886 57.854 104.083 79.369 1.00 23.81 O
ATOM 27 OP2 C A 886 56.799 105.068 77.247 1.00 22.07 O
ATOM 28 O5' C A 886 58.537 106.307 78.501 1.00 25.94 O
TER
ATOM 1 O3' G B 908 63.655 96.437 78.720 1.00 31.81 O
ATOM 2 P A B 909 63.930 97.912 79.285 1.00 33.03 P
ATOM 3 OP1 A B 909 62.976 98.867 78.654 1.00 31.65 O
ATOM 4 OP2 A B 909 65.390 98.168 79.212 1.00 35.19 O
ATOM 5 O5' A B 909 63.550 97.811 80.823 1.00 34.56 O
ATOM 6 C5' A B 909 62.205 97.542 81.229 1.00 36.78 C
ATOM 7 C4' A B 909 62.203 96.933 82.599 1.00 38.07 C
ATOM 8 O4' A B 909 62.928 95.692 82.563 1.00 40.96 O
ATOM 9 C3' A B 909 62.951 97.735 83.646 1.00 39.81 C
ATOM 10 O3' A B 909 62.021 98.677 84.146 1.00 38.50 O
ATOM 11 C2' A B 909 63.277 96.682 84.705 1.00 41.49 C
ATOM 12 O2' A B 909 62.209 96.483 85.612 1.00 47.77 O
ATOM 13 C1' A B 909 63.390 95.406 83.863 1.00 41.70 C
ATOM 14 N9 A B 909 64.689 94.743 83.769 1.00 41.22 N
ATOM 15 C8 A B 909 65.955 95.263 83.824 1.00 41.68 C
ATOM 16 N7 A B 909 66.900 94.360 83.720 1.00 41.29 N
ATOM 17 C5 A B 909 66.209 93.167 83.586 1.00 42.84 C
ATOM 18 C6 A B 909 66.635 91.834 83.450 1.00 43.92 C
ATOM 19 N6 A B 909 67.916 91.460 83.438 1.00 44.95 N
ATOM 20 N1 A B 909 65.684 90.882 83.331 1.00 44.61 N
ATOM 21 C2 A B 909 64.395 91.254 83.360 1.00 43.63 C
ATOM 22 N3 A B 909 63.873 92.468 83.494 1.00 41.69 N
ATOM 23 C4 A B 909 64.846 93.390 83.604 1.00 42.26 C
ATOM 24 P A B 910 62.501 100.126 84.613 1.00 40.63 P
ATOM 25 OP1 A B 910 63.775 100.500 83.955 1.00 41.89 O
ATOM 26 OP2 A B 910 62.402 100.144 86.098 1.00 43.27 O
ATOM 27 O5' A B 910 61.346 101.062 84.055 1.00 39.21 O
TER
ATOM 2 P G A 885 58.719 106.289 72.081 1.00 27.51 P
ATOM 3 OP1 G A 885 58.344 105.135 71.232 1.00 28.94 O
ATOM 4 OP2 G A 885 58.140 107.619 71.804 1.00 23.19 O
ATOM 5 O5' G A 885 58.410 105.951 73.604 1.00 26.64 O
ATOM 6 C5' G A 885 57.691 104.770 73.970 1.00 24.28 C
ATOM 7 C4' G A 885 58.509 103.933 74.918 1.00 23.06 C
ATOM 8 O4' G A 885 59.418 103.091 74.158 1.00 23.50 O
ATOM 9 C3' G A 885 59.378 104.699 75.918 1.00 23.02 C
ATOM 10 O3' G A 885 59.148 104.212 77.231 1.00 21.30 O
ATOM 11 C2' G A 885 60.801 104.377 75.446 1.00 23.20 C
ATOM 12 O2' G A 885 61.779 104.356 76.464 1.00 22.59 O
ATOM 13 C1' G A 885 60.622 102.981 74.868 1.00 21.24 C
ATOM 14 N9 G A 885 61.694 102.593 73.954 1.00 22.57 N
ATOM 15 C8 G A 885 62.052 103.197 72.769 1.00 20.87 C
ATOM 16 N7 G A 885 63.110 102.662 72.224 1.00 19.90 N
ATOM 17 C5 G A 885 63.465 101.636 73.091 1.00 21.52 C
ATOM 18 C6 G A 885 64.549 100.719 73.044 1.00 22.50 C
ATOM 19 O6 G A 885 65.464 100.644 72.223 1.00 20.95 O
ATOM 20 N1 G A 885 64.513 99.833 74.110 1.00 23.05 N
ATOM 21 C2 G A 885 63.578 99.837 75.108 1.00 24.39 C
ATOM 22 N2 G A 885 63.718 98.900 76.056 1.00 25.91 N
ATOM 23 N3 G A 885 62.580 100.696 75.177 1.00 23.83 N
ATOM 24 C4 G A 885 62.585 101.561 74.145 1.00 21.62 C
ATOM 25 P C A 886 57.985 104.870 78.117 1.00 22.93 P
ATOM 26 OP1 C A 886 57.854 104.083 79.369 1.00 23.81 O
ATOM 27 OP2 C A 886 56.799 105.068 77.247 1.00 22.07 O
ATOM 28 O5' C A 886 58.537 106.307 78.501 1.00 25.94 O
TER
ATOM 1 O3' G B 908 63.655 96.437 78.720 1.00 31.81 O
ATOM 2 P A B 909 63.930 97.912 79.285 1.00 33.03 P
ATOM 3 OP1 A B 909 62.976 98.867 78.654 1.00 31.65 O
ATOM 4 OP2 A B 909 65.390 98.168 79.212 1.00 35.19 O
ATOM 5 O5' A B 909 63.550 97.811 80.823 1.00 34.56 O
ATOM 6 C5' A B 909 62.205 97.542 81.229 1.00 36.78 C
ATOM 7 C4' A B 909 62.203 96.933 82.599 1.00 38.07 C
ATOM 8 O4' A B 909 62.928 95.692 82.563 1.00 40.96 O
ATOM 9 C3' A B 909 62.951 97.735 83.646 1.00 39.81 C
ATOM 10 O3' A B 909 62.021 98.677 84.146 1.00 38.50 O
ATOM 11 C2' A B 909 63.277 96.682 84.705 1.00 41.49 C
ATOM 12 O2' A B 909 62.209 96.483 85.612 1.00 47.77 O
ATOM 13 C1' A B 909 63.390 95.406 83.863 1.00 41.70 C
ATOM 14 N9 A B 909 64.689 94.743 83.769 1.00 41.22 N
ATOM 15 C8 A B 909 65.955 95.263 83.824 1.00 41.68 C
ATOM 16 N7 A B 909 66.900 94.360 83.720 1.00 41.29 N
ATOM 17 C5 A B 909 66.209 93.167 83.586 1.00 42.84 C
ATOM 18 C6 A B 909 66.635 91.834 83.450 1.00 43.92 C
ATOM 19 N6 A B 909 67.916 91.460 83.438 1.00 44.95 N
ATOM 20 N1 A B 909 65.684 90.882 83.331 1.00 44.61 N
ATOM 21 C2 A B 909 64.395 91.254 83.360 1.00 43.63 C
ATOM 22 N3 A B 909 63.873 92.468 83.494 1.00 41.69 N
ATOM 23 C4 A B 909 64.846 93.390 83.604 1.00 42.26 C
ATOM 24 P A B 910 62.501 100.126 84.613 1.00 40.63 P
ATOM 25 OP1 A B 910 63.775 100.500 83.955 1.00 41.89 O
ATOM 26 OP2 A B 910 62.402 100.144 86.098 1.00 43.27 O
ATOM 27 O5' A B 910 61.346 101.062 84.055 1.00 39.21 O
TER
Atoms:
OP1: (58.344,105.135,71.232)
OP2: (58.140,107.619,71.804)
C3': (59.378,104.699,75.918)
C1': (60.622,102.981,74.868)
C5': (57.691,104.770,73.970)
O6: (65.464,100.644,72.223)
O4': (59.418,103.091,74.158)
C8: (62.052,103.197,72.769)
C2: (63.578,99.837,75.108)
C6: (64.549,100.719,73.044)
C5: (63.465,101.636,73.091)
C4: (62.585,101.561,74.145)
P: (58.719,106.289,72.081)
C4': (58.509,103.933,74.918)
C2': (60.801,104.377,75.446)
O2': (61.779,104.356,76.464)
N1: (64.513,99.833,74.110)
N2: (63.718,98.900,76.056)
N3: (62.580,100.696,75.177)
N7: (63.110,102.662,72.224)
N9: (61.694,102.593,73.954)
O5': (58.410,105.951,73.604)
O3': (59.148,104.212,77.231)
OP2: (58.140,107.619,71.804)
C3': (59.378,104.699,75.918)
C1': (60.622,102.981,74.868)
C5': (57.691,104.770,73.970)
O6: (65.464,100.644,72.223)
O4': (59.418,103.091,74.158)
C8: (62.052,103.197,72.769)
C2: (63.578,99.837,75.108)
C6: (64.549,100.719,73.044)
C5: (63.465,101.636,73.091)
C4: (62.585,101.561,74.145)
P: (58.719,106.289,72.081)
C4': (58.509,103.933,74.918)
C2': (60.801,104.377,75.446)
O2': (61.779,104.356,76.464)
N1: (64.513,99.833,74.110)
N2: (63.718,98.900,76.056)
N3: (62.580,100.696,75.177)
N7: (63.110,102.662,72.224)
N9: (61.694,102.593,73.954)
O5': (58.410,105.951,73.604)
O3': (59.148,104.212,77.231)
OP1: (62.976,98.867,78.654)
OP2: (65.390,98.168,79.212)
C3': (62.951,97.735,83.646)
C1': (63.390,95.406,83.863)
C5': (62.205,97.542,81.229)
O4': (62.928,95.692,82.563)
C8: (65.955,95.263,83.824)
O2': (62.209,96.483,85.612)
C6: (66.635,91.834,83.450)
C5: (66.209,93.167,83.586)
C4: (64.846,93.390,83.604)
P: (63.930,97.912,79.285)
C4': (62.203,96.933,82.599)
C2': (63.277,96.682,84.705)
C2: (64.395,91.254,83.360)
N1: (65.684,90.882,83.331)
N3: (63.873,92.468,83.494)
N6: (67.916,91.460,83.438)
N7: (66.900,94.360,83.720)
N9: (64.689,94.743,83.769)
O5': (63.550,97.811,80.823)
O3': (62.021,98.677,84.146)
OP2: (65.390,98.168,79.212)
C3': (62.951,97.735,83.646)
C1': (63.390,95.406,83.863)
C5': (62.205,97.542,81.229)
O4': (62.928,95.692,82.563)
C8: (65.955,95.263,83.824)
O2': (62.209,96.483,85.612)
C6: (66.635,91.834,83.450)
C5: (66.209,93.167,83.586)
C4: (64.846,93.390,83.604)
P: (63.930,97.912,79.285)
C4': (62.203,96.933,82.599)
C2': (63.277,96.682,84.705)
C2: (64.395,91.254,83.360)
N1: (65.684,90.882,83.331)
N3: (63.873,92.468,83.494)
N6: (67.916,91.460,83.438)
N7: (66.900,94.360,83.720)
N9: (64.689,94.743,83.769)
O5': (63.550,97.811,80.823)
O3': (62.021,98.677,84.146)
Image (generated by PyMOL):