Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A683:A787
Extra
PDB:
ATOM 1 O3' U A 682 -8.045 152.670 159.865 1.00 0.16 O
ATOM 2 P G A 683 -6.768 152.249 159.008 1.00 8.46 P
ATOM 3 OP1 G A 683 -5.576 152.654 159.784 1.00 8.46 O
ATOM 4 OP2 G A 683 -6.963 152.794 157.622 1.00 8.46 O
ATOM 5 O5' G A 683 -6.873 150.656 158.986 1.00 8.46 O
ATOM 6 C5' G A 683 -7.017 149.948 157.756 1.00 8.46 C
ATOM 7 C4' G A 683 -8.054 148.856 157.858 1.00 8.46 C
ATOM 8 O4' G A 683 -9.382 149.428 157.859 1.00 8.46 O
ATOM 9 C3' G A 683 -8.091 147.863 156.715 1.00 8.46 C
ATOM 10 O3' G A 683 -7.097 146.876 156.837 1.00 8.46 O
ATOM 11 C2' G A 683 -9.506 147.309 156.792 1.00 8.46 C
ATOM 12 O2' G A 683 -9.602 146.286 157.784 1.00 8.46 O
ATOM 13 C1' G A 683 -10.288 148.530 157.264 1.00 8.46 C
ATOM 14 N9 G A 683 -10.965 149.218 156.163 1.00 8.30 N
ATOM 15 C8 G A 683 -10.817 150.525 155.803 1.00 8.30 C
ATOM 16 N7 G A 683 -11.585 150.874 154.808 1.00 8.30 N
ATOM 17 C5 G A 683 -12.303 149.723 154.498 1.00 8.30 C
ATOM 18 C6 G A 683 -13.279 149.488 153.490 1.00 8.30 C
ATOM 19 O6 G A 683 -13.737 150.277 152.647 1.00 8.30 O
ATOM 20 N1 G A 683 -13.716 148.174 153.545 1.00 8.30 N
ATOM 21 C2 G A 683 -13.278 147.218 154.446 1.00 8.30 C
ATOM 22 N2 G A 683 -13.817 145.993 154.358 1.00 8.30 N
ATOM 23 N3 G A 683 -12.368 147.423 155.389 1.00 8.30 N
ATOM 24 C4 G A 683 -11.926 148.696 155.348 1.00 8.30 C
ATOM 25 P A A 684 -5.751 146.990 155.988 1.00 5.70 P
ATOM 26 OP1 A A 684 -4.633 147.096 156.954 1.00 5.70 O
ATOM 27 OP2 A A 684 -5.940 148.083 154.972 1.00 5.70 O
ATOM 28 O5' A A 684 -5.705 145.588 155.267 1.00 5.70 O
TER
ATOM 1 O3' C B 786 -13.213 141.940 154.939 1.00 0.01 O
ATOM 2 P A B 787 -14.067 142.244 156.273 1.00 0.01 P
ATOM 3 OP1 A B 787 -15.429 141.706 156.034 1.00 0.01 O
ATOM 4 OP2 A B 787 -13.904 143.697 156.588 1.00 0.01 O
ATOM 5 O5' A B 787 -13.334 141.373 157.370 1.00 0.01 O
ATOM 6 C5' A B 787 -13.613 139.998 157.478 1.00 0.01 C
ATOM 7 C4' A B 787 -12.940 139.425 158.660 1.00 0.01 C
ATOM 8 O4' A B 787 -11.533 139.745 158.567 1.00 0.01 O
ATOM 9 C3' A B 787 -13.411 140.010 159.968 1.00 0.01 C
ATOM 10 O3' A B 787 -13.251 139.050 160.996 1.00 0.01 O
ATOM 11 C2' A B 787 -12.442 141.168 160.177 1.00 0.01 C
ATOM 12 O2' A B 787 -12.319 141.613 161.519 1.00 0.01 O
ATOM 13 C1' A B 787 -11.153 140.561 159.649 1.00 0.01 C
ATOM 14 N9 A B 787 -10.202 141.525 159.149 1.00 0.14 N
ATOM 15 C8 A B 787 -10.336 142.239 158.013 1.00 0.14 C
ATOM 16 N7 A B 787 -9.318 143.031 157.789 1.00 0.14 N
ATOM 17 C5 A B 787 -8.449 142.802 158.856 1.00 0.14 C
ATOM 18 C6 A B 787 -7.167 143.325 159.200 1.00 0.14 C
ATOM 19 N6 A B 787 -6.463 144.236 158.501 1.00 0.14 N
ATOM 20 N1 A B 787 -6.618 142.856 160.327 1.00 0.14 N
ATOM 21 C2 A B 787 -7.303 141.956 161.036 1.00 0.14 C
ATOM 22 N3 A B 787 -8.483 141.400 160.821 1.00 0.14 N
ATOM 23 C4 A B 787 -9.007 141.863 159.697 1.00 0.14 C
ATOM 24 P A B 788 -14.506 138.659 161.905 1.00 7.81 P
ATOM 25 OP1 A B 788 -15.727 139.020 161.135 1.00 7.81 O
ATOM 26 OP2 A B 788 -14.296 139.277 163.231 1.00 7.81 O
ATOM 27 O5' A B 788 -14.374 137.084 162.019 1.00 7.81 O
TER
ATOM 2 P G A 683 -6.768 152.249 159.008 1.00 8.46 P
ATOM 3 OP1 G A 683 -5.576 152.654 159.784 1.00 8.46 O
ATOM 4 OP2 G A 683 -6.963 152.794 157.622 1.00 8.46 O
ATOM 5 O5' G A 683 -6.873 150.656 158.986 1.00 8.46 O
ATOM 6 C5' G A 683 -7.017 149.948 157.756 1.00 8.46 C
ATOM 7 C4' G A 683 -8.054 148.856 157.858 1.00 8.46 C
ATOM 8 O4' G A 683 -9.382 149.428 157.859 1.00 8.46 O
ATOM 9 C3' G A 683 -8.091 147.863 156.715 1.00 8.46 C
ATOM 10 O3' G A 683 -7.097 146.876 156.837 1.00 8.46 O
ATOM 11 C2' G A 683 -9.506 147.309 156.792 1.00 8.46 C
ATOM 12 O2' G A 683 -9.602 146.286 157.784 1.00 8.46 O
ATOM 13 C1' G A 683 -10.288 148.530 157.264 1.00 8.46 C
ATOM 14 N9 G A 683 -10.965 149.218 156.163 1.00 8.30 N
ATOM 15 C8 G A 683 -10.817 150.525 155.803 1.00 8.30 C
ATOM 16 N7 G A 683 -11.585 150.874 154.808 1.00 8.30 N
ATOM 17 C5 G A 683 -12.303 149.723 154.498 1.00 8.30 C
ATOM 18 C6 G A 683 -13.279 149.488 153.490 1.00 8.30 C
ATOM 19 O6 G A 683 -13.737 150.277 152.647 1.00 8.30 O
ATOM 20 N1 G A 683 -13.716 148.174 153.545 1.00 8.30 N
ATOM 21 C2 G A 683 -13.278 147.218 154.446 1.00 8.30 C
ATOM 22 N2 G A 683 -13.817 145.993 154.358 1.00 8.30 N
ATOM 23 N3 G A 683 -12.368 147.423 155.389 1.00 8.30 N
ATOM 24 C4 G A 683 -11.926 148.696 155.348 1.00 8.30 C
ATOM 25 P A A 684 -5.751 146.990 155.988 1.00 5.70 P
ATOM 26 OP1 A A 684 -4.633 147.096 156.954 1.00 5.70 O
ATOM 27 OP2 A A 684 -5.940 148.083 154.972 1.00 5.70 O
ATOM 28 O5' A A 684 -5.705 145.588 155.267 1.00 5.70 O
TER
ATOM 1 O3' C B 786 -13.213 141.940 154.939 1.00 0.01 O
ATOM 2 P A B 787 -14.067 142.244 156.273 1.00 0.01 P
ATOM 3 OP1 A B 787 -15.429 141.706 156.034 1.00 0.01 O
ATOM 4 OP2 A B 787 -13.904 143.697 156.588 1.00 0.01 O
ATOM 5 O5' A B 787 -13.334 141.373 157.370 1.00 0.01 O
ATOM 6 C5' A B 787 -13.613 139.998 157.478 1.00 0.01 C
ATOM 7 C4' A B 787 -12.940 139.425 158.660 1.00 0.01 C
ATOM 8 O4' A B 787 -11.533 139.745 158.567 1.00 0.01 O
ATOM 9 C3' A B 787 -13.411 140.010 159.968 1.00 0.01 C
ATOM 10 O3' A B 787 -13.251 139.050 160.996 1.00 0.01 O
ATOM 11 C2' A B 787 -12.442 141.168 160.177 1.00 0.01 C
ATOM 12 O2' A B 787 -12.319 141.613 161.519 1.00 0.01 O
ATOM 13 C1' A B 787 -11.153 140.561 159.649 1.00 0.01 C
ATOM 14 N9 A B 787 -10.202 141.525 159.149 1.00 0.14 N
ATOM 15 C8 A B 787 -10.336 142.239 158.013 1.00 0.14 C
ATOM 16 N7 A B 787 -9.318 143.031 157.789 1.00 0.14 N
ATOM 17 C5 A B 787 -8.449 142.802 158.856 1.00 0.14 C
ATOM 18 C6 A B 787 -7.167 143.325 159.200 1.00 0.14 C
ATOM 19 N6 A B 787 -6.463 144.236 158.501 1.00 0.14 N
ATOM 20 N1 A B 787 -6.618 142.856 160.327 1.00 0.14 N
ATOM 21 C2 A B 787 -7.303 141.956 161.036 1.00 0.14 C
ATOM 22 N3 A B 787 -8.483 141.400 160.821 1.00 0.14 N
ATOM 23 C4 A B 787 -9.007 141.863 159.697 1.00 0.14 C
ATOM 24 P A B 788 -14.506 138.659 161.905 1.00 7.81 P
ATOM 25 OP1 A B 788 -15.727 139.020 161.135 1.00 7.81 O
ATOM 26 OP2 A B 788 -14.296 139.277 163.231 1.00 7.81 O
ATOM 27 O5' A B 788 -14.374 137.084 162.019 1.00 7.81 O
TER
Atoms:
OP1: (-5.576,152.654,159.784)
OP2: (-6.963,152.794,157.622)
C3': (-8.091,147.863,156.715)
C1': (-10.288,148.530,157.264)
C5': (-7.017,149.948,157.756)
O6: (-13.737,150.277,152.647)
O4': (-9.382,149.428,157.859)
C8: (-10.817,150.525,155.803)
C2: (-13.278,147.218,154.446)
C6: (-13.279,149.488,153.490)
C5: (-12.303,149.723,154.498)
C4: (-11.926,148.696,155.348)
P: (-6.768,152.249,159.008)
C4': (-8.054,148.856,157.858)
C2': (-9.506,147.309,156.792)
O2': (-9.602,146.286,157.784)
N1: (-13.716,148.174,153.545)
N2: (-13.817,145.993,154.358)
N3: (-12.368,147.423,155.389)
N7: (-11.585,150.874,154.808)
N9: (-10.965,149.218,156.163)
O5': (-6.873,150.656,158.986)
O3': (-7.097,146.876,156.837)
OP2: (-6.963,152.794,157.622)
C3': (-8.091,147.863,156.715)
C1': (-10.288,148.530,157.264)
C5': (-7.017,149.948,157.756)
O6: (-13.737,150.277,152.647)
O4': (-9.382,149.428,157.859)
C8: (-10.817,150.525,155.803)
C2: (-13.278,147.218,154.446)
C6: (-13.279,149.488,153.490)
C5: (-12.303,149.723,154.498)
C4: (-11.926,148.696,155.348)
P: (-6.768,152.249,159.008)
C4': (-8.054,148.856,157.858)
C2': (-9.506,147.309,156.792)
O2': (-9.602,146.286,157.784)
N1: (-13.716,148.174,153.545)
N2: (-13.817,145.993,154.358)
N3: (-12.368,147.423,155.389)
N7: (-11.585,150.874,154.808)
N9: (-10.965,149.218,156.163)
O5': (-6.873,150.656,158.986)
O3': (-7.097,146.876,156.837)
OP1: (-15.429,141.706,156.034)
OP2: (-13.904,143.697,156.588)
C3': (-13.411,140.010,159.968)
C1': (-11.153,140.561,159.649)
C5': (-13.613,139.998,157.478)
O4': (-11.533,139.745,158.567)
C8: (-10.336,142.239,158.013)
O2': (-12.319,141.613,161.519)
C6: (-7.167,143.325,159.200)
C5: (-8.449,142.802,158.856)
C4: (-9.007,141.863,159.697)
P: (-14.067,142.244,156.273)
C4': (-12.940,139.425,158.660)
C2': (-12.442,141.168,160.177)
C2: (-7.303,141.956,161.036)
N1: (-6.618,142.856,160.327)
N3: (-8.483,141.400,160.821)
N6: (-6.463,144.236,158.501)
N7: (-9.318,143.031,157.789)
N9: (-10.202,141.525,159.149)
O5': (-13.334,141.373,157.370)
O3': (-13.251,139.050,160.996)
OP2: (-13.904,143.697,156.588)
C3': (-13.411,140.010,159.968)
C1': (-11.153,140.561,159.649)
C5': (-13.613,139.998,157.478)
O4': (-11.533,139.745,158.567)
C8: (-10.336,142.239,158.013)
O2': (-12.319,141.613,161.519)
C6: (-7.167,143.325,159.200)
C5: (-8.449,142.802,158.856)
C4: (-9.007,141.863,159.697)
P: (-14.067,142.244,156.273)
C4': (-12.940,139.425,158.660)
C2': (-12.442,141.168,160.177)
C2: (-7.303,141.956,161.036)
N1: (-6.618,142.856,160.327)
N3: (-8.483,141.400,160.821)
N6: (-6.463,144.236,158.501)
N7: (-9.318,143.031,157.789)
N9: (-10.202,141.525,159.149)
O5': (-13.334,141.373,157.370)
O3': (-13.251,139.050,160.996)
Image (generated by PyMOL):